RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C VPS8P39702 1274 aa7.24□□□□□ -1.25
YPT1YFL038C OSW7P43611 510 aa7.24□□□□□ -1.25
YPT1YFL038C FYV8P46949 817 aaKnown RBP7.24□□□□□ -1.25
YPT1YFL038C APT1P49435 187 aaKnown RBP7.24□□□□□ -1.25
YPT1YFL038C EBS1Q03466 884 aaKnown RBP7.24□□□□□ -1.25
YPT1YFL038C PRP42Q03776 544 aaKnown RBP7.24□□□□□ -1.25
YPT1YFL038C GIS4Q04233 774 aa7.24□□□□□ -1.25
YPT1YFL038C ATG9Q12142 997 aa7.24□□□□□ -1.25
YPT1YFL038C HKR1P41809 1802 aa7.23□□□□□ -1.25
YPT1YFL038C CIT1P00890 479 aa7.23□□□□□ -1.25
YPT1YFL038C SEC23P15303 768 aaKnown RBP7.23□□□□□ -1.25
YPT1YFL038C SRP54P20424 541 aaKnown RBP7.23□□□□□ -1.25
YPT1YFL038C MAK11P20484 414 aaKnown RBP7.23□□□□□ -1.25
YPT1YFL038C UBC1P21734 215 aaKnown RBP7.23□□□□□ -1.25
YPT1YFL038C SEC65P29478 273 aa7.23□□□□□ -1.25
YPT1YFL038C SMY1P32364 656 aaKnown RBP7.23□□□□□ -1.25
YPT1YFL038C YGL015CP33199 130 aa7.23□□□□□ -1.25
YPT1YFL038C RRP1P35178 278 aaPredicted RBP7.23□□□□□ -1.25
YPT1YFL038C SHM1P37292 490 aaPredicted RBP7.23□□□□□ -1.25
YPT1YFL038C RTT107P38850 1070 aa7.23□□□□□ -1.25
YPT1YFL038C PES4P39684 611 aa7.23□□□□□ -1.25
YPT1YFL038C VTC2P43585 828 aa7.23□□□□□ -1.25
YPT1YFL038C AIP1P46680 615 aaKnown RBP7.23□□□□□ -1.25
YPT1YFL038C CAF130P53280 1122 aaPredicted RBP7.23□□□□□ -1.25
YPT1YFL038C PUS6P53294 404 aa7.23□□□□□ -1.25
YPT1YFL038C MDM1Q01846 1127 aa7.23□□□□□ -1.25
YPT1YFL038C PSR2Q07949 397 aa7.23□□□□□ -1.25
YPT1YFL038C KEL3Q08979 651 aaPredicted RBP7.23□□□□□ -1.25
YPT1YFL038C HMI1Q12039 706 aa7.23□□□□□ -1.25
YPT1YFL038C RPS6AP0CX37 236 aaKnown RBP7.22□□□□□ -1.25
YPT1YFL038C RPS6BP0CX38 236 aaPredicted RBP7.22□□□□□ -1.25
YPT1YFL038C DPB3P27344 201 aa7.22□□□□□ -1.25
YPT1YFL038C STO1P34160 861 aaKnown RBP7.22□□□□□ -1.25
YPT1YFL038C SET4P42948 560 aa7.22□□□□□ -1.25
YPT1YFL038C YGR153WP48238 217 aa7.22□□□□□ -1.25
YPT1YFL038C MAL13P53338 473 aa7.22□□□□□ -1.25
YPT1YFL038C TRS120Q04183 1289 aa7.22□□□□□ -1.25
YPT1YFL038C SPP382Q06411 708 aaPredicted RBP7.22□□□□□ -1.25
YPT1YFL038C ACK1Q07622 623 aaPredicted RBP7.22□□□□□ -1.25
YPT1YFL038C SLK19Q08581 821 aaKnown RBP7.22□□□□□ -1.25
YPT1YFL038C MCM16Q12262 181 aa7.22□□□□□ -1.25
YPT1YFL038C NUC1P08466 329 aa7.21□□□□□ -1.26
YPT1YFL038C RRP43P25359 394 aaPredicted RBP7.21□□□□□ -1.26
YPT1YFL038C YEL043WP32618 956 aa7.21□□□□□ -1.26
YPT1YFL038C ERT1P38140 529 aa7.21□□□□□ -1.26
YPT1YFL038C MIP6P38760 659 aaKnown RBP7.21□□□□□ -1.26
YPT1YFL038C SPT8P38915 602 aa7.21□□□□□ -1.26
YPT1YFL038C NDC80P40460 691 aa7.21□□□□□ -1.26
YPT1YFL038C PRP31P49704 494 aaPredicted RBP7.21□□□□□ -1.26
YPT1YFL038C UBA2P52488 636 aa7.21□□□□□ -1.26
YPT1YFL038C FOL1P53848 824 aa7.21□□□□□ -1.26
YPT1YFL038C ERG5P54781 538 aa7.21□□□□□ -1.26
YPT1YFL038C SML1Q04964 104 aa7.21□□□□□ -1.26
YPT1YFL038C PCL8Q08966 492 aa7.21□□□□□ -1.26
YPT1YFL038C NEW1Q08972 1196 aaKnown RBP7.21□□□□□ -1.26
YPT1YFL038C NOP14Q99207 810 aaKnown RBP7.21□□□□□ -1.26
YPT1YFL038C CKA2P19454 339 aa7.2□□□□□ -1.26
YPT1YFL038C PRE8P23639 250 aa7.2□□□□□ -1.26
YPT1YFL038C PSO2P30620 661 aa7.2□□□□□ -1.26
YPT1YFL038C MCX1P38323 520 aaPredicted RBP7.2□□□□□ -1.26
YPT1YFL038C ERG7P38604 731 aa7.2□□□□□ -1.26
YPT1YFL038C BUD16P39988 312 aa7.2□□□□□ -1.26
YPT1YFL038C SEC9P40357 651 aa7.2□□□□□ -1.26
YPT1YFL038C LSC2P53312 427 aa7.2□□□□□ -1.26
YPT1YFL038C SDA1P53313 767 aaKnown RBP7.2□□□□□ -1.26
YPT1YFL038C BOP3P53958 396 aa7.2□□□□□ -1.26
YPT1YFL038C VPS30Q02948 557 aa7.2□□□□□ -1.26
YPT1YFL038C SKG3Q06315 1026 aa7.2□□□□□ -1.26
YPT1YFL038C GRX6Q12438 231 aa7.2□□□□□ -1.26
YPT1YFL038C SRM1P21827 482 aa7.19□□□□□ -1.26
YPT1YFL038C SAS3P34218 831 aa7.19□□□□□ -1.26
YPT1YFL038C UGA2P38067 497 aa7.19□□□□□ -1.26
YPT1YFL038C REI1P38344 393 aaPredicted RBP7.19□□□□□ -1.26
YPT1YFL038C TIF4632P39936 914 aaKnown RBP7.19□□□□□ -1.26
YPT1YFL038C VFA1P40080 203 aa7.19□□□□□ -1.26
YPT1YFL038C EFM4P40516 257 aa7.19□□□□□ -1.26
YPT1YFL038C GSM1P42950 618 aa7.19□□□□□ -1.26
YPT1YFL038C HFM1P51979 1187 aa7.19□□□□□ -1.26
YPT1YFL038C RBA50Q04418 439 aa7.19□□□□□ -1.26
YPT1YFL038C YLR287CQ05881 355 aa7.19□□□□□ -1.26
YPT1YFL038C SMD2Q06217 110 aaKnown RBP7.19□□□□□ -1.26
YPT1YFL038C VAC14Q06708 880 aa7.19□□□□□ -1.26
YPT1YFL038C GAS5Q08193 484 aa7.19□□□□□ -1.26
YPT1YFL038C RRP6Q12149 733 aaKnown RBP7.19□□□□□ -1.26
YPT1YFL038C YOL098CQ12496 1037 aa7.19□□□□□ -1.26
YPT1YFL038C TUF1P02992 437 aaKnown RBP7.18□□□□□ -1.26
YPT1YFL038C MIP1P15801 1254 aa7.18□□□□□ -1.26
YPT1YFL038C ACE2P21192 770 aa7.18□□□□□ -1.26
YPT1YFL038C SEC20P28791 383 aa7.18□□□□□ -1.26
YPT1YFL038C YKU70P32807 602 aa7.18□□□□□ -1.26
YPT1YFL038C YKL222CP35995 705 aa7.18□□□□□ -1.26
YPT1YFL038C YBL086CP38177 466 aa7.18□□□□□ -1.26
YPT1YFL038C ATG32P40458 529 aa7.18□□□□□ -1.26
YPT1YFL038C SHQ1P40486 507 aaPredicted RBP7.18□□□□□ -1.26
YPT1YFL038C ASE1P50275 885 aa7.18□□□□□ -1.26
YPT1YFL038C UTP5Q04177 643 aaKnown RBP7.18□□□□□ -1.26
YPT1YFL038C CSM3Q04659 317 aa7.18□□□□□ -1.26
YPT1YFL038C TLG2Q08144 397 aa7.18□□□□□ -1.26
YPT1YFL038C YAP7Q08182 245 aa7.18□□□□□ -1.26
YPT1YFL038C PLP2Q12017 286 aa7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms