RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeastyeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VCX1YDL128W SSL2Q00578 843 aa6.32□□□□□ -1.4
VCX1YDL128W SRT1Q03175 343 aa6.32□□□□□ -1.4
VCX1YDL128W YOL087CQ99247 1116 aa6.32□□□□□ -1.4
VCX1YDL128W YRF1-2P40105 1681 aa6.32□□□□□ -1.4
VCX1YDL128W RPS19AP07280 144 aaKnown RBP6.31□□□□□ -1.4
VCX1YDL128W RPS19BP07281 144 aaPredicted RBP6.31□□□□□ -1.4
VCX1YDL128W MCM1P11746 286 aa6.31□□□□□ -1.4
VCX1YDL128W PHO87P25360 923 aa6.31□□□□□ -1.4
VCX1YDL128W ELM1P32801 640 aa6.31□□□□□ -1.4
VCX1YDL128W DEF1P35732 738 aaKnown RBP6.31□□□□□ -1.4
VCX1YDL128W RTT107P38850 1070 aa6.31□□□□□ -1.4
VCX1YDL128W IPL1P38991 367 aa6.31□□□□□ -1.4
VCX1YDL128W MSH4P40965 878 aaPredicted RBP6.31□□□□□ -1.4
VCX1YDL128W DSD1P53095 428 aa6.31□□□□□ -1.4
VCX1YDL128W YGL140CP53120 1219 aa6.31□□□□□ -1.4
VCX1YDL128W YNR014WP53719 212 aa6.31□□□□□ -1.4
VCX1YDL128W SML1Q04964 104 aa6.31□□□□□ -1.4
VCX1YDL128W URB1P34241 1764 aaKnown RBP6.31□□□□□ -1.4
VCX1YDL128W PET111P08468 800 aa6.3□□□□□ -1.4
VCX1YDL128W ATE1P16639 503 aa6.3□□□□□ -1.4
VCX1YDL128W SPR3P41901 512 aa6.3□□□□□ -1.4
VCX1YDL128W PRP31P49704 494 aaPredicted RBP6.3□□□□□ -1.4
VCX1YDL128W PEX14P53112 341 aa6.3□□□□□ -1.4
VCX1YDL128W PRP3Q03338 469 aaPredicted RBP6.3□□□□□ -1.4
VCX1YDL128W TDA6Q06466 467 aa6.3□□□□□ -1.4
VCX1YDL128W BMS1Q08965 1183 aaKnown RBP6.3□□□□□ -1.4
VCX1YDL128W GPM1P00950 247 aaKnown RBP6.29□□□□□ -1.4
VCX1YDL128W LEU2P04173 364 aaPredicted RBP6.29□□□□□ -1.4
VCX1YDL128W LEU1P07264 779 aaKnown RBP6.29□□□□□ -1.4
VCX1YDL128W RPL19AP0CX82 189 aaKnown RBP6.29□□□□□ -1.4
VCX1YDL128W RPL19BP0CX83 189 aaPredicted RBP6.29□□□□□ -1.4
VCX1YDL128W VPS41P38959 992 aa6.29□□□□□ -1.4
VCX1YDL128W MAM1P40065 302 aa6.29□□□□□ -1.4
VCX1YDL128W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
VCX1YDL128W ALD2P47771 506 aa6.29□□□□□ -1.4
VCX1YDL128W ZDS1P50111 915 aaKnown RBP6.29□□□□□ -1.4
VCX1YDL128W YNL050CP53952 270 aa6.29□□□□□ -1.4
VCX1YDL128W RCM1P53972 490 aa6.29□□□□□ -1.4
VCX1YDL128W YMR102CQ03177 834 aa6.29□□□□□ -1.4
VCX1YDL128W TLG2Q08144 397 aa6.29□□□□□ -1.4
VCX1YDL128W GIN4Q12263 1142 aa6.29□□□□□ -1.4
VCX1YDL128W HAP4P14064 554 aa6.28□□□□□ -1.4
VCX1YDL128W FRS2P15625 503 aaKnown RBP6.28□□□□□ -1.4
VCX1YDL128W MSH1P25846 959 aa6.28□□□□□ -1.4
VCX1YDL128W PRX1P34227 261 aaKnown RBP6.28□□□□□ -1.4
VCX1YDL128W AKL1P38080 1108 aaKnown RBP6.28□□□□□ -1.4
VCX1YDL128W COG4Q06096 861 aa6.28□□□□□ -1.4
VCX1YDL128W RPN7Q06103 429 aaKnown RBP6.28□□□□□ -1.4
VCX1YDL128W SGD1Q06132 899 aa6.28□□□□□ -1.4
VCX1YDL128W YPR053CQ6Q5F3 151 aa6.28□□□□□ -1.4
VCX1YDL128W TRS33Q99394 268 aa6.28□□□□□ -1.4
VCX1YDL128W RRP5Q05022 1729 aaKnown RBP6.28□□□□□ -1.4
VCX1YDL128W RGP1P16664 663 aa6.27□□□□□ -1.41
VCX1YDL128W PPH3P32345 308 aa6.27□□□□□ -1.41
VCX1YDL128W GDT1P38301 280 aaPredicted RBP6.27□□□□□ -1.41
VCX1YDL128W YBR287WP38355 427 aa6.27□□□□□ -1.41
VCX1YDL128W SIC1P38634 284 aa6.27□□□□□ -1.41
VCX1YDL128W MTR4P47047 1073 aaKnown RBP6.27□□□□□ -1.41
VCX1YDL128W MTO1P53070 669 aa6.27□□□□□ -1.41
VCX1YDL128W YGL082WP53155 381 aa6.27□□□□□ -1.41
VCX1YDL128W GAS4Q08271 471 aa6.27□□□□□ -1.41
VCX1YDL128W YKL068W-AQ3E826 78 aa6.27□□□□□ -1.41
VCX1YDL128W GAL2P13181 574 aa6.26□□□□□ -1.41
VCX1YDL128W MSH3P25336 1018 aa6.26□□□□□ -1.41
VCX1YDL128W HSP104P31539 908 aaKnown RBP6.26□□□□□ -1.41
VCX1YDL128W GCD7P32502 381 aaPredicted RBP6.26□□□□□ -1.41
VCX1YDL128W TTI1P36097 1038 aa6.26□□□□□ -1.41
VCX1YDL128W CTH1P47976 325 aa6.26□□□□□ -1.41
VCX1YDL128W ECM23Q02710 187 aa6.26□□□□□ -1.41
VCX1YDL128W TPM1P17536 199 aaKnown RBP6.25□□□□□ -1.41
VCX1YDL128W SRP54P20424 541 aaKnown RBP6.25□□□□□ -1.41
VCX1YDL128W MBR1P23493 339 aa6.25□□□□□ -1.41
VCX1YDL128W BYE1P36106 594 aa6.25□□□□□ -1.41
VCX1YDL128W BOI2P39969 1040 aa6.25□□□□□ -1.41
VCX1YDL128W ROM1P53046 1155 aa6.25□□□□□ -1.41
VCX1YDL128W YMR187CQ03236 431 aa6.25□□□□□ -1.41
VCX1YDL128W TY1A-DR2Q03964 440 aaKnown RBP6.25□□□□□ -1.41
VCX1YDL128W NOP8Q08287 484 aaPredicted RBP6.25□□□□□ -1.41
VCX1YDL128W SWI3P32591 825 aa6.24□□□□□ -1.41
VCX1YDL128W SWH1P35845 1188 aa6.24□□□□□ -1.41
VCX1YDL128W TGL4P36165 910 aa6.24□□□□□ -1.41
VCX1YDL128W RIA1P53893 1110 aa6.24□□□□□ -1.41
VCX1YDL128W DDP1Q99321 188 aaKnown RBP6.24□□□□□ -1.41
VCX1YDL128W PDC5P16467 563 aaKnown RBP6.23□□□□□ -1.41
VCX1YDL128W RAD24P32641 659 aa6.23□□□□□ -1.41
VCX1YDL128W RRM3P38766 723 aa6.23□□□□□ -1.41
VCX1YDL128W YIL177CP40434 1758 aa6.23□□□□□ -1.41
VCX1YDL128W YJL225CP40889 1758 aa6.23□□□□□ -1.41
VCX1YDL128W ADE6P38972 1358 aaKnown RBP6.22□□□□□ -1.41
VCX1YDL128W PET123P17558 318 aa6.22□□□□□ -1.41
VCX1YDL128W UBP1P25037 809 aa6.22□□□□□ -1.41
VCX1YDL128W CPS1P27614 576 aa6.22□□□□□ -1.41
VCX1YDL128W SLD2P34252 453 aa6.22□□□□□ -1.41
VCX1YDL128W MSC7P38694 644 aa6.22□□□□□ -1.41
VCX1YDL128W OSW7P43611 510 aa6.22□□□□□ -1.41
VCX1YDL128W CTF18P49956 741 aa6.22□□□□□ -1.41
VCX1YDL128W ARP5P53946 755 aa6.22□□□□□ -1.41
VCX1YDL128W SWI1P09547 1314 aa6.22□□□□□ -1.41
VCX1YDL128W CPA2P03965 1118 aaKnown RBP6.21□□□□□ -1.42
VCX1YDL128W RPP1AP05318 106 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms