RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP30	YCR021C	SSF1	P38789	453 aa	Predicted RBP	4.83	□□□□□ -1.64
HSP30	YCR021C	DLD3	P39976	496 aa	Known RBP	4.83	□□□□□ -1.64
HSP30	YCR021C	YJL007C	P47080	104 aa		4.83	□□□□□ -1.64
HSP30	YCR021C	PGA3	Q12746	312 aa	Known RBP	4.83	□□□□□ -1.64
HSP30	YCR021C	NCB2	Q92317	146 aa		4.83	□□□□□ -1.64
HSP30	YCR021C	CDC19	P00549	500 aa	Known RBP	4.82	□□□□□ -1.64
HSP30	YCR021C	SSA1	P10591	642 aa	Known RBP	4.82	□□□□□ -1.64
HSP30	YCR021C	SUP45	P12385	437 aa	Known RBP	4.82	□□□□□ -1.64
HSP30	YCR021C	RPS7A	P26786	190 aa	Known RBP	4.82	□□□□□ -1.64
HSP30	YCR021C	DAL1	P32375	460 aa		4.82	□□□□□ -1.64
HSP30	YCR021C	PTK1	P36002	662 aa	Predicted RBP	4.82	□□□□□ -1.64
HSP30	YCR021C	HGH1	P48362	394 aa	Known RBP	4.82	□□□□□ -1.64
HSP30	YCR021C	MLC1	P53141	149 aa		4.82	□□□□□ -1.64
HSP30	YCR021C	RIM20	Q12033	661 aa		4.82	□□□□□ -1.64
HSP30	YCR021C	WTM2	Q12206	467 aa		4.82	□□□□□ -1.64
HSP30	YCR021C	GRX6	Q12438	231 aa		4.82	□□□□□ -1.64
HSP30	YCR021C	RAD50	P12753	1312 aa		4.81	□□□□□ -1.64
HSP30	YCR021C	LAM4	P38800	1345 aa		4.81	□□□□□ -1.64
HSP30	YCR021C	ENO2	P00925	437 aa	Known RBP	4.81	□□□□□ -1.64
HSP30	YCR021C	CHO2	P05374	869 aa	Known RBP	4.81	□□□□□ -1.64
HSP30	YCR021C	PBY1	P38254	753 aa		4.81	□□□□□ -1.64
HSP30	YCR021C	SOH1	P38633	127 aa		4.81	□□□□□ -1.64
HSP30	YCR021C	TRM44	Q02648	567 aa	Known RBP	4.81	□□□□□ -1.64
HSP30	YCR021C	FAS2	P19097	1887 aa	Known RBP	4.8	□□□□□ -1.64
HSP30	YCR021C	THS1	P04801	734 aa	Known RBP	4.8	□□□□□ -1.64
HSP30	YCR021C	SUP35	P05453	685 aa	Known RBP	4.8	□□□□□ -1.64
HSP30	YCR021C	VAS1	P07806	1104 aa	Known RBP	4.8	□□□□□ -1.64
HSP30	YCR021C	UTR2	P32623	467 aa		4.8	□□□□□ -1.64
HSP30	YCR021C	AAP1	P37898	856 aa	Known RBP	4.8	□□□□□ -1.64
HSP30	YCR021C	SHC1	P39000	512 aa		4.8	□□□□□ -1.64
HSP30	YCR021C	YFH7	P43591	353 aa		4.8	□□□□□ -1.64
HSP30	YCR021C	NAM8	Q00539	523 aa	Known RBP	4.8	□□□□□ -1.64
HSP30	YCR021C	KAR5	Q04746	504 aa		4.8	□□□□□ -1.64
HSP30	YCR021C	UTP13	Q05946	817 aa	Known RBP	4.8	□□□□□ -1.64
HSP30	YCR021C	WRS1	Q12109	432 aa	Known RBP	4.8	□□□□□ -1.64
HSP30	YCR021C	RRG1	Q12167	365 aa	Predicted RBP	4.8	□□□□□ -1.64
HSP30	YCR021C	FIG2	P25653	1609 aa		4.79	□□□□□ -1.64
HSP30	YCR021C	SNF3	P10870	884 aa		4.79	□□□□□ -1.64
HSP30	YCR021C	MDL2	P33311	773 aa		4.79	□□□□□ -1.64
HSP30	YCR021C	UTP7	P40055	554 aa	Known RBP	4.79	□□□□□ -1.64
HSP30	YCR021C	FET4	P40988	552 aa		4.79	□□□□□ -1.64
HSP30	YCR021C	HDA1	P53973	706 aa		4.79	□□□□□ -1.64
HSP30	YCR021C	PRP42	Q03776	544 aa	Known RBP	4.79	□□□□□ -1.64
HSP30	YCR021C	BRE1	Q07457	700 aa	Known RBP	4.79	□□□□□ -1.64
HSP30	YCR021C	PPM2	Q08282	695 aa		4.79	□□□□□ -1.64
HSP30	YCR021C	DUR1,2	P32528	1835 aa	Known RBP	4.79	□□□□□ -1.64
HSP30	YCR021C	FLO1	P32768	1537 aa		4.78	□□□□□ -1.64
HSP30	YCR021C	COQ1	P18900	473 aa		4.78	□□□□□ -1.64
HSP30	YCR021C	TBS1	P38114	1094 aa		4.78	□□□□□ -1.64
HSP30	YCR021C	YHL050C	P38721	697 aa		4.78	□□□□□ -1.64
HSP30	YCR021C	ATG3	P40344	310 aa		4.78	□□□□□ -1.64
HSP30	YCR021C	JJJ2	P46997	583 aa		4.78	□□□□□ -1.64
HSP30	YCR021C	LYS5	P50113	272 aa		4.78	□□□□□ -1.64
HSP30	YCR021C	MTC3	P53077	123 aa		4.78	□□□□□ -1.64
HSP30	YCR021C	HDA3	Q06623	655 aa		4.78	□□□□□ -1.64
HSP30	YCR021C	TRL1	P09880	827 aa	Known RBP	4.77	□□□□□ -1.65
HSP30	YCR021C	HPR1	P17629	752 aa	Known RBP	4.77	□□□□□ -1.65
HSP30	YCR021C	CIC1	P38779	376 aa	Known RBP	4.77	□□□□□ -1.65
HSP30	YCR021C	STM1	P39015	273 aa	Known RBP	4.77	□□□□□ -1.65
HSP30	YCR021C	SSN3	P39073	555 aa		4.77	□□□□□ -1.65
HSP30	YCR021C	BIM1	P40013	344 aa		4.77	□□□□□ -1.65
HSP30	YCR021C	FPR4	Q06205	392 aa	Predicted RBP	4.77	□□□□□ -1.65
HSP30	YCR021C	YLR278C	Q05854	1341 aa		4.76	□□□□□ -1.65
HSP30	YCR021C	CBP1	P07252	654 aa		4.76	□□□□□ -1.65
HSP30	YCR021C	BOI1	P38041	980 aa	Known RBP	4.76	□□□□□ -1.65
HSP30	YCR021C	NUG1	P40010	520 aa	Known RBP	4.76	□□□□□ -1.65
HSP30	YCR021C	ATG32	P40458	529 aa		4.76	□□□□□ -1.65
HSP30	YCR021C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
HSP30	YCR021C	RLF2	Q12495	606 aa		4.76	□□□□□ -1.65
HSP30	YCR021C	HKR1	P41809	1802 aa		4.75	□□□□□ -1.65
HSP30	YCR021C	MSM1	P22438	575 aa		4.75	□□□□□ -1.65
HSP30	YCR021C	PRO3	P32263	286 aa	Known RBP	4.75	□□□□□ -1.65
HSP30	YCR021C	KEL1	P38853	1164 aa	Known RBP	4.75	□□□□□ -1.65
HSP30	YCR021C	PNT1	P38969	423 aa		4.75	□□□□□ -1.65
HSP30	YCR021C	AIM9	P40053	627 aa	Known RBP	4.75	□□□□□ -1.65
HSP30	YCR021C	VID28	P40547	921 aa		4.75	□□□□□ -1.65
HSP30	YCR021C	ALA1	P40825	983 aa	Known RBP	4.75	□□□□□ -1.65
HSP30	YCR021C	IRC8	P47046	822 aa		4.75	□□□□□ -1.65
HSP30	YCR021C	JJJ3	P47138	172 aa		4.75	□□□□□ -1.65
HSP30	YCR021C	RIM21	P48565	533 aa		4.75	□□□□□ -1.65
HSP30	YCR021C	SEN54	Q02825	467 aa	Predicted RBP	4.75	□□□□□ -1.65
HSP30	YCR021C	UBX2	Q04228	584 aa		4.75	□□□□□ -1.65
HSP30	YCR021C	TAH18	Q12181	623 aa		4.75	□□□□□ -1.65
HSP30	YCR021C	PIF1	P07271	859 aa		4.74	□□□□□ -1.65
HSP30	YCR021C	RDS2	P19541	446 aa	Known RBP	4.74	□□□□□ -1.65
HSP30	YCR021C	ACE2	P21192	770 aa		4.74	□□□□□ -1.65
HSP30	YCR021C	IMP2'	P32351	346 aa		4.74	□□□□□ -1.65
HSP30	YCR021C	SLX8	P40072	274 aa		4.74	□□□□□ -1.65
HSP30	YCR021C	ENT3	P47160	408 aa		4.74	□□□□□ -1.65
HSP30	YCR021C	UBP15	P50101	1230 aa		4.74	□□□□□ -1.65
HSP30	YCR021C	YGR117C	P53270	476 aa		4.74	□□□□□ -1.65
HSP30	YCR021C	CUZ1	P53899	274 aa		4.74	□□□□□ -1.65
HSP30	YCR021C	ECM16	Q04217	1267 aa	Known RBP	4.74	□□□□□ -1.65
HSP30	YCR021C	TIF1	P10081	395 aa	Known RBP	4.73	□□□□□ -1.65
HSP30	YCR021C	SSA4	P22202	642 aa	Known RBP	4.73	□□□□□ -1.65
HSP30	YCR021C	RTG2	P32608	588 aa	Known RBP	4.73	□□□□□ -1.65
HSP30	YCR021C	OPY1	P38271	328 aa		4.73	□□□□□ -1.65
HSP30	YCR021C	CSM2	P40465	213 aa		4.73	□□□□□ -1.65
HSP30	YCR021C	KRI1	P42846	591 aa	Known RBP	4.73	□□□□□ -1.65
HSP30	YCR021C	EPL1	P43572	832 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms