RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	ALO1	P54783	526 aa	Known RBP	6.35	□□□□□ -1.39
APA1	YCL050C	RMD1	Q03441	430 aa		6.35	□□□□□ -1.39
APA1	YCL050C	EST2	Q06163	884 aa		6.35	□□□□□ -1.39
APA1	YCL050C	MED7	Q08278	222 aa		6.35	□□□□□ -1.39
APA1	YCL050C	NSI1	Q12457	570 aa		6.35	□□□□□ -1.39
APA1	YCL050C	TAF13	P11747	167 aa		6.34	□□□□□ -1.39
APA1	YCL050C	WHI3	P34761	661 aa	Known RBP	6.34	□□□□□ -1.39
APA1	YCL050C	RDH54	P38086	958 aa		6.34	□□□□□ -1.39
APA1	YCL050C	MRL1	Q06815	381 aa		6.34	□□□□□ -1.39
APA1	YCL050C	CYC7	P00045	113 aa		6.33	□□□□□ -1.4
APA1	YCL050C	YOR059C	Q08448	450 aa	Known RBP	6.33	□□□□□ -1.4
APA1	YCL050C	TRP3	P00937	484 aa		6.32	□□□□□ -1.4
APA1	YCL050C	HEM13	P11353	328 aa	Known RBP	6.32	□□□□□ -1.4
APA1	YCL050C	RET1	P22276	1149 aa	Known RBP	6.32	□□□□□ -1.4
APA1	YCL050C	MAC1	P35192	417 aa		6.32	□□□□□ -1.4
APA1	YCL050C	OMA1	P36163	345 aa		6.32	□□□□□ -1.4
APA1	YCL050C	ALT1	P52893	592 aa		6.32	□□□□□ -1.4
APA1	YCL050C	SNU71	P53207	620 aa	Known RBP	6.32	□□□□□ -1.4
APA1	YCL050C	RCM1	P53972	490 aa		6.32	□□□□□ -1.4
APA1	YCL050C	RKM2	Q03942	479 aa		6.32	□□□□□ -1.4
APA1	YCL050C	HDA2	Q06629	674 aa		6.32	□□□□□ -1.4
APA1	YCL050C	GLT1	Q12680	2145 aa	Known RBP	6.31	□□□□□ -1.4
APA1	YCL050C	PET112	P33893	541 aa		6.31	□□□□□ -1.4
APA1	YCL050C	TOS1	P38288	455 aa		6.31	□□□□□ -1.4
APA1	YCL050C	GCR1	P07261	785 aa		6.3	□□□□□ -1.4
APA1	YCL050C	YKR073C	P36153	106 aa		6.3	□□□□□ -1.4
APA1	YCL050C	TPP1	Q03796	238 aa		6.3	□□□□□ -1.4
APA1	YCL050C	RSA3	Q05942	220 aa	Known RBP	6.3	□□□□□ -1.4
APA1	YCL050C	YLR257W	Q06146	321 aa	Known RBP	6.3	□□□□□ -1.4
APA1	YCL050C	HRK1	Q08732	759 aa	Known RBP	6.3	□□□□□ -1.4
APA1	YCL050C	RAD27	P26793	382 aa		6.29	□□□□□ -1.4
APA1	YCL050C	LIP5	P32875	414 aa		6.29	□□□□□ -1.4
APA1	YCL050C	VPS53	P47061	822 aa		6.29	□□□□□ -1.4
APA1	YCL050C	SIW14	P53965	281 aa		6.29	□□□□□ -1.4
APA1	YCL050C	EAR1	Q03212	550 aa		6.29	□□□□□ -1.4
APA1	YCL050C	NAP1	P25293	417 aa	Known RBP	6.28	□□□□□ -1.4
APA1	YCL050C	NMD3	P38861	518 aa	Known RBP	6.28	□□□□□ -1.4
APA1	YCL050C	ROD1	Q02805	837 aa		6.28	□□□□□ -1.4
APA1	YCL050C	PUS7	Q08647	676 aa	Known RBP	6.28	□□□□□ -1.4
APA1	YCL050C	RTT10	Q08924	1013 aa		6.28	□□□□□ -1.4
APA1	YCL050C	PTC5	Q12511	572 aa		6.28	□□□□□ -1.4
APA1	YCL050C	QNS1	P38795	714 aa	Known RBP	6.27	□□□□□ -1.41
APA1	YCL050C	ENT3	P47160	408 aa		6.26	□□□□□ -1.41
APA1	YCL050C	SVF1	Q05515	481 aa		6.26	□□□□□ -1.41
APA1	YCL050C	YVC1	Q12324	675 aa		6.26	□□□□□ -1.41
APA1	YCL050C	MNR2	P35724	969 aa		6.25	□□□□□ -1.41
APA1	YCL050C	ALG3	P38179	458 aa		6.25	□□□□□ -1.41
APA1	YCL050C	INP52	P50942	1183 aa		6.25	□□□□□ -1.41
APA1	YCL050C	JIP5	Q06214	492 aa	Predicted RBP	6.25	□□□□□ -1.41
APA1	YCL050C	TMA46	Q12000	345 aa	Known RBP	6.25	□□□□□ -1.41
APA1	YCL050C	GCD1	P09032	578 aa	Predicted RBP	6.24	□□□□□ -1.41
APA1	YCL050C	MKK2	P32491	506 aa		6.24	□□□□□ -1.41
APA1	YCL050C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
APA1	YCL050C	AFG2	P32794	780 aa		6.24	□□□□□ -1.41
APA1	YCL050C	MAD1	P40957	749 aa		6.24	□□□□□ -1.41
APA1	YCL050C	OYE3	P41816	400 aa	Predicted RBP	6.24	□□□□□ -1.41
APA1	YCL050C	SDH1	Q00711	640 aa		6.24	□□□□□ -1.41
APA1	YCL050C	RAT1	Q02792	1006 aa	Known RBP	6.24	□□□□□ -1.41
APA1	YCL050C	BRE4	Q07660	1125 aa		6.24	□□□□□ -1.41
APA1	YCL050C	TRE1	Q08919	783 aa		6.24	□□□□□ -1.41
APA1	YCL050C	CLN2	P20438	545 aa		6.23	□□□□□ -1.41
APA1	YCL050C	SYP1	P25623	870 aa	Known RBP	6.23	□□□□□ -1.41
APA1	YCL050C	YHL012W	P38709	493 aa		6.23	□□□□□ -1.41
APA1	YCL050C	YJL045W	P47052	634 aa		6.23	□□□□□ -1.41
APA1	YCL050C	GNP1	P48813	663 aa		6.23	□□□□□ -1.41
APA1	YCL050C	CDC34	P14682	295 aa		6.22	□□□□□ -1.41
APA1	YCL050C	HXT13	P39924	564 aa		6.22	□□□□□ -1.41
APA1	YCL050C	HXT17	P53631	564 aa		6.22	□□□□□ -1.41
APA1	YCL050C	HXT15	P54854	567 aa		6.22	□□□□□ -1.41
APA1	YCL050C	MAG2	Q06436	670 aa	Known RBP	6.22	□□□□□ -1.41
APA1	YCL050C	ADP1	P25371	1049 aa		6.21	□□□□□ -1.42
APA1	YCL050C	KIP1	P28742	1111 aa		6.21	□□□□□ -1.42
APA1	YCL050C	PRO1	P32264	428 aa		6.21	□□□□□ -1.42
APA1	YCL050C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.21	□□□□□ -1.42	not detected
APA1	YCL050C	PTC7	P38797	343 aa		6.2	□□□□□ -1.42
APA1	YCL050C	GPB2	P39717	880 aa		6.2	□□□□□ -1.42
APA1	YCL050C	CNN1	P43618	361 aa		6.2	□□□□□ -1.42
APA1	YCL050C	CWC24	P53769	259 aa		6.2	□□□□□ -1.42
APA1	YCL050C	SSY1	Q03770	852 aa		6.2	□□□□□ -1.42
APA1	YCL050C	YPL260W	Q08977	551 aa		6.2	□□□□□ -1.42
APA1	YCL050C	SPO21	Q12411	609 aa		6.2	□□□□□ -1.42
APA1	YCL050C	RER2	P35196	286 aa		6.19	□□□□□ -1.42
APA1	YCL050C	MCM7	P38132	845 aa		6.19	□□□□□ -1.42
APA1	YCL050C	RGD1	P38339	666 aa		6.19	□□□□□ -1.42
APA1	YCL050C	PEX7	P39108	375 aa		6.19	□□□□□ -1.42
APA1	YCL050C	GTS1	P40956	396 aa		6.19	□□□□□ -1.42
APA1	YCL050C	CTH1	P47976	325 aa		6.19	□□□□□ -1.42
APA1	YCL050C	COQ4	O13525	335 aa		6.18	□□□□□ -1.42
APA1	YCL050C	DBP5	P20449	482 aa	Known RBP	6.18	□□□□□ -1.42
APA1	YCL050C	YSC84	P32793	468 aa		6.18	□□□□□ -1.42
APA1	YCL050C	MDL2	P33311	773 aa		6.18	□□□□□ -1.42
APA1	YCL050C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.18	□□□□□ -1.42	not detected
APA1	YCL050C	MLS1	P30952	554 aa		6.17	□□□□□ -1.42
APA1	YCL050C	DUT1	P33317	147 aa		6.17	□□□□□ -1.42
APA1	YCL050C	MET10	P39692	1035 aa		6.17	□□□□□ -1.42
APA1	YCL050C	NOP7	P53261	605 aa	Known RBP	6.17	□□□□□ -1.42
APA1	YCL050C	TNA1	P53322	534 aa		6.17	□□□□□ -1.42
APA1	YCL050C	HOS3	Q02959	697 aa	Known RBP	6.17	□□□□□ -1.42
APA1	YCL050C	GDE1	Q02979	1223 aa		6.17	□□□□□ -1.42
APA1	YCL050C	NBA1	Q08229	501 aa	Known RBP	6.17	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms