RNA–Protein interactions for RNA: YBR296C

PHO89, Transcript of Plasma membrane Na+/Pi cotransporter, yeast

Gene PHO89, Length 1,725 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO89	YBR296C	UGA4	P32837	571 aa		11.53	□□□□□ -0.56
PHO89	YBR296C	CCT3	P39077	534 aa	Known RBP	11.53	□□□□□ -0.56
PHO89	YBR296C	ASE1	P50275	885 aa		11.53	□□□□□ -0.56
PHO89	YBR296C	GDE1	Q02979	1223 aa		11.53	□□□□□ -0.56
PHO89	YBR296C	PIB1	Q06651	286 aa		11.53	□□□□□ -0.56
PHO89	YBR296C	ERP3	Q12403	225 aa		11.53	□□□□□ -0.56
PHO89	YBR296C	PAN5	P38787	379 aa		11.52	□□□□□ -0.56
PHO89	YBR296C	ISA1	Q07821	250 aa	Predicted RBP	11.52	□□□□□ -0.56
PHO89	YBR296C	TY1B-A	O13527	1196 aa	Known RBP	11.52	□□□□□ -0.57
PHO89	YBR296C	PWP2	P25635	923 aa	Known RBP	11.52	□□□□□ -0.57
PHO89	YBR296C	YHL017W	P38745	532 aa		11.52	□□□□□ -0.57
PHO89	YBR296C	PCI8	P40512	444 aa		11.52	□□□□□ -0.57
PHO89	YBR296C	YIR014W	P40570	242 aa		11.52	□□□□□ -0.57
PHO89	YBR296C	PRY3	P47033	881 aa		11.52	□□□□□ -0.57
PHO89	YBR296C	SLD5	Q03406	294 aa		11.52	□□□□□ -0.57
PHO89	YBR296C	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.51	□□□□□ -0.57	not detected
PHO89	YBR296C	YLR326W	Q06170	240 aa	Known RBP	11.51	□□□□□ -0.57
PHO89	YBR296C	PSK2	Q08217	1101 aa		11.51	□□□□□ -0.57
PHO89	YBR296C	MAK11	P20484	414 aa	Known RBP	11.5	□□□□□ -0.57
PHO89	YBR296C	CBP3	P21560	335 aa		11.5	□□□□□ -0.57
PHO89	YBR296C	TKL1	P23254	680 aa	Known RBP	11.5	□□□□□ -0.57
PHO89	YBR296C	PAM1	P37304	830 aa	Known RBP	11.5	□□□□□ -0.57
PHO89	YBR296C	RPN10	P38886	268 aa	Known RBP	11.5	□□□□□ -0.57
PHO89	YBR296C	AIM21	P40563	679 aa		11.5	□□□□□ -0.57
PHO89	YBR296C	YGL138C	P53122	345 aa		11.5	□□□□□ -0.57
PHO89	YBR296C	VPS62	P53285	467 aa		11.5	□□□□□ -0.57
PHO89	YBR296C	MYO1	P08964	1928 aa		11.5	□□□□□ -0.57
PHO89	YBR296C	HCA4	P20448	770 aa	Known RBP	11.49	□□□□□ -0.57
PHO89	YBR296C	MCM4	P30665	933 aa	Known RBP	11.49	□□□□□ -0.57
PHO89	YBR296C	SEC8	P32855	1065 aa		11.49	□□□□□ -0.57
PHO89	YBR296C	DBP7	P36120	742 aa	Known RBP	11.49	□□□□□ -0.57
PHO89	YBR296C	PTA1	Q01329	785 aa	Predicted RBP	11.49	□□□□□ -0.57
PHO89	YBR296C	MSC6	Q08818	692 aa	Known RBP	11.49	□□□□□ -0.57
PHO89	YBR296C	SUT2	Q12286	268 aa		11.49	□□□□□ -0.57
PHO89	YBR296C	CTF18	P49956	741 aa		11.49	□□□□□ -0.57
PHO89	YBR296C	RKM4	Q12504	494 aa		11.49	□□□□□ -0.57
PHO89	YBR296C	TFC4	P33339	1025 aa		11.48	□□□□□ -0.57
PHO89	YBR296C	BRE5	P53741	515 aa	Known RBP	11.48	□□□□□ -0.57
PHO89	YBR296C	YOR131C	Q12486	218 aa		11.48	□□□□□ -0.57
PHO89	YBR296C	YUR1	P26725	428 aa		11.47	□□□□□ -0.57
PHO89	YBR296C	ASF1	P32447	279 aa		11.47	□□□□□ -0.57
PHO89	YBR296C	REG2	P38232	338 aa		11.47	□□□□□ -0.57
PHO89	YBR296C	YMR321C	Q04898	105 aa		11.47	□□□□□ -0.57
PHO89	YBR296C	CEX1	Q12453	761 aa		11.47	□□□□□ -0.57
PHO89	YBR296C	RLF2	Q12495	606 aa		11.47	□□□□□ -0.57
PHO89	YBR296C	RPL19A	P0CX82	189 aa	Known RBP	11.46	□□□□□ -0.57
PHO89	YBR296C	RPL19B	P0CX83	189 aa	Predicted RBP	11.46	□□□□□ -0.57
PHO89	YBR296C	BCS1	P32839	456 aa		11.46	□□□□□ -0.57
PHO89	YBR296C	SUL1	P38359	859 aa		11.46	□□□□□ -0.57
PHO89	YBR296C	BUD6	P41697	788 aa		11.46	□□□□□ -0.57
PHO89	YBR296C	VPS53	P47061	822 aa		11.46	□□□□□ -0.57
PHO89	YBR296C	YJR107W	P47145	328 aa		11.46	□□□□□ -0.57
PHO89	YBR296C	YGL039W	P53183	348 aa	Known RBP	11.46	□□□□□ -0.57
PHO89	YBR296C	NAF1	P53919	492 aa	Known RBP	11.46	□□□□□ -0.57
PHO89	YBR296C	TIM23	P32897	222 aa		11.46	□□□□□ -0.58
PHO89	YBR296C	MAC1	P35192	417 aa		11.46	□□□□□ -0.58
PHO89	YBR296C	LDH1	P38139	375 aa		11.46	□□□□□ -0.58
PHO89	YBR296C	GIS4	Q04233	774 aa		11.46	□□□□□ -0.58
PHO89	YBR296C	MDM20	Q12387	796 aa	Known RBP	11.46	□□□□□ -0.58
PHO89	YBR296C	TRM11	Q12463	433 aa		11.46	□□□□□ -0.58
PHO89	YBR296C	CDC6	P09119	513 aa		11.45	□□□□□ -0.58
PHO89	YBR296C	AFG3	P39925	761 aa		11.45	□□□□□ -0.58
PHO89	YBR296C	CTR1	P49573	406 aa		11.45	□□□□□ -0.58
PHO89	YBR296C	RET3	P53600	189 aa		11.45	□□□□□ -0.58
PHO89	YBR296C	OXR1	Q08952	273 aa		11.45	□□□□□ -0.58
PHO89	YBR296C	ELG1	Q12050	791 aa		11.45	□□□□□ -0.58
PHO89	YBR296C	ARP6	Q12509	438 aa		11.45	□□□□□ -0.58
PHO89	YBR296C	DBP1	P24784	617 aa	Known RBP	11.44	□□□□□ -0.58
PHO89	YBR296C	SRO9	P25567	434 aa	Known RBP	11.44	□□□□□ -0.58
PHO89	YBR296C	SAS3	P34218	831 aa		11.44	□□□□□ -0.58
PHO89	YBR296C	TTI1	P36097	1038 aa		11.44	□□□□□ -0.58
PHO89	YBR296C	KSP1	P38691	1029 aa	Known RBP	11.44	□□□□□ -0.58
PHO89	YBR296C	SCS3	P53012	380 aa		11.44	□□□□□ -0.58
PHO89	YBR296C	BNI5	P53890	448 aa	Known RBP	11.44	□□□□□ -0.58
PHO89	YBR296C	SMD2	Q06217	110 aa	Known RBP	11.44	□□□□□ -0.58
PHO89	YBR296C	WHI4	Q07655	649 aa	Known RBP	11.44	□□□□□ -0.58
PHO89	YBR296C	SES1	P07284	462 aa	Known RBP	11.43	□□□□□ -0.58
PHO89	YBR296C	VPS1	P21576	704 aa	Known RBP	11.43	□□□□□ -0.58
PHO89	YBR296C	OYE2	Q03558	400 aa	Known RBP	11.43	□□□□□ -0.58
PHO89	YBR296C	YPL150W	Q12152	901 aa		11.43	□□□□□ -0.58
PHO89	YBR296C	POX1	P13711	748 aa		11.43	□□□□□ -0.58
PHO89	YBR296C	ENT3	P47160	408 aa		11.43	□□□□□ -0.58
PHO89	YBR296C	ORC4	P54791	529 aa		11.43	□□□□□ -0.58
PHO89	YBR296C	VPS20	Q04272	221 aa		11.43	□□□□□ -0.58
PHO89	YBR296C	PDC1	P06169	563 aa	Known RBP	11.42	□□□□□ -0.58
PHO89	YBR296C	YDR461C-A	Q2V2P7	80 aa		11.42	□□□□□ -0.58
PHO89	YBR296C	UIP5	P36137	443 aa		11.41	□□□□□ -0.58
PHO89	YBR296C	NOC2	P39744	710 aa	Known RBP	11.41	□□□□□ -0.58
PHO89	YBR296C	SKP2	P42843	763 aa		11.41	□□□□□ -0.58
PHO89	YBR296C	ECM30	Q06673	1274 aa		11.41	□□□□□ -0.58
PHO89	YBR296C	GET3	Q12154	354 aa	Known RBP	11.41	□□□□□ -0.58
PHO89	YBR296C	HSP82	P02829	709 aa	Known RBP	11.4	□□□□□ -0.58
PHO89	YBR296C	CPA2	P03965	1118 aa	Known RBP	11.4	□□□□□ -0.58
PHO89	YBR296C	CLB5	P30283	435 aa		11.4	□□□□□ -0.58
PHO89	YBR296C	CIT3	P43635	486 aa		11.4	□□□□□ -0.58
PHO89	YBR296C	DSE4	P53753	1117 aa		11.4	□□□□□ -0.58
PHO89	YBR296C	CSM3	Q04659	317 aa		11.4	□□□□□ -0.58
PHO89	YBR296C	DCS2	Q12123	353 aa		11.4	□□□□□ -0.58
PHO89	YBR296C	RFC5	P38251	354 aa		11.4	□□□□□ -0.58
PHO89	YBR296C	NPA3	P47122	385 aa		11.4	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms