RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Gm7361D3Z6R1 267 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 5031410I06RikE9Q4E0 267 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Gm1979E9QAN3 267 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Gm5862K7N5V5 267 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Gm10220K7N660 267 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Trim28Q62318 834 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Rsph6aQ8CDR2 708 aa18.81■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Emilin1Q99K41 1017 aa18.8■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Tns2Q8CGB6 1400 aa18.79■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Ppp1r15aP17564 657 aa18.79■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Plin1Q8CGN5 517 aa18.79■□□□□ 0.6
Ldb3-207ENSMUST00000227819 IncenpQ9WU62 880 aa18.79■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Cald1E9QA15 768 aaKnown RBP18.78■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Fchsd2Q3USJ8 740 aa18.78■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Eif3bQ8JZQ9 803 aaKnown RBP18.78■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.77■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Bicdl1A0JNT9 577 aa18.77■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Plekhg5Q66T02 1073 aa18.77■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Igsf1Q7TQA1 1317 aa18.77■□□□□ 0.6
Ldb3-207ENSMUST00000227819 Slc5a1Q8C3K6 665 aa18.77■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Hmgb2P30681 210 aaKnown RBP18.76■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Crb1Q8VHS2 1405 aa18.76■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Tjp1P39447 1745 aaKnown RBP18.75■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Chrna2Q91X60 512 aa18.75■□□□□ 0.59
Ldb3-207ENSMUST00000227819 MeiocA2AG06 965 aa18.74■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Asic4Q7TNS7 539 aa18.74■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Slc12a5Q91V14 1138 aa18.74■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Msl1Q6PDM1 616 aa18.73■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Phkg2Q9DB30 406 aa18.73■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Hirip3Q8BLH7 601 aa18.72■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Hdac6Q9Z2V5 1149 aa18.72■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Zswim8Q3UHH1 1832 aaKnown RBP18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Jdp2P97875 163 aa18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Las1lA2BE28 776 aaKnown RBP18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Rad23bP54728 416 aa18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Ints5Q8CHT3 1018 aa18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Pdzd9Q9D9M4 266 aa18.71■□□□□ 0.59
Ldb3-207ENSMUST00000227819 Gsdma3Q5Y4Y6 464 aa18.7■□□□□ 0.58
Ldb3-207ENSMUST00000227819 ErfeQ6PGN1 340 aa18.7■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Ppm1fQ8CGA0 452 aa18.7■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Mcm10Q0VBD2 885 aa18.69■□□□□ 0.58
Ldb3-207ENSMUST00000227819 P2rx7Q9Z1M0 595 aa18.69■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Chmp7Q8R1T1 451 aa18.68■□□□□ 0.58
Ldb3-207ENSMUST00000227819 HypkQ9CR41 129 aa18.67■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Mtfr1lQ9CWE0 289 aa18.67■□□□□ 0.58
Ldb3-207ENSMUST00000227819 TnikP83510 1323 aa18.67■□□□□ 0.58
Ldb3-207ENSMUST00000227819 CoblQ5NBX1 1337 aaKnown RBP18.67■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Lrp5Q91VN0 1614 aa18.66■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Zcwpw1Q6IR42 630 aa18.66■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Ssfa2Q922B9 1252 aa18.66■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Atg3Q9CPX6 314 aa18.66■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Col23a1Q8K4G2 532 aa18.65■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Amotl1Q9D4H4 968 aa18.65■□□□□ 0.58
Ldb3-207ENSMUST00000227819 PalmQ9Z0P4 383 aa18.65■□□□□ 0.58
Ldb3-207ENSMUST00000227819 Aox2Q5SGK3 1345 aa18.64■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Gm13023A2A8N2 498 aa18.64■□□□□ 0.57
Ldb3-207ENSMUST00000227819 NppbP40753 121 aa18.64■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Smarcc1P97496 1104 aa18.63■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Jmjd4Q8BFT6 427 aa18.63■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Egfem1Q8C088 590 aa18.63■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Sumf1Q8R0F3 372 aa18.63■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Zfp777B9EKF4 885 aa18.62■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Prom2Q3UUY6 835 aa18.62■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Cap2Q9CYT6 476 aa18.62■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Usp21Q9QZL6 566 aa18.62■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Magea6O89010 325 aa18.61■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Magea3Q6T340 320 aa18.61■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Dcaf5Q80T85 946 aa18.61■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Spef2Q8C9J3 1734 aa18.61■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Sned1Q70E20 1403 aa18.6■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Ubr3Q5U430 1889 aa18.6■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Nkx2-3P97334 362 aa18.59■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Ccdc155Q80VJ8 648 aa18.59■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Miga2Q8BK03 593 aa18.59■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Msh6P54276 1358 aaKnown RBP18.59■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Col11a2Q64739 1736 aa18.59■□□□□ 0.57
Ldb3-207ENSMUST00000227819 Ppef1O35655 650 aa18.58■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Ppp2r1aQ76MZ3 589 aa18.58■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Ubr2Q6WKZ8 1755 aa18.57■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Sos1Q62245 1319 aa18.57■□□□□ 0.56
Ldb3-207ENSMUST00000227819 C4bP01029 1738 aa18.56■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Smg7Q5RJH6 1138 aaKnown RBP18.56■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Nlrp6Q91WS2 869 aa18.56■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Mapk8ip2Q9ERE9 830 aa18.56■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Snap23O09044 210 aa18.55■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Rnf180Q3U827 592 aa18.55■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Znrd1-asQ8R0E5 213 aa18.55■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Stk31Q99MW1 1018 aa18.55■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Spata31d1bE9QA57 1361 aa18.55■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Plch1Q4KWH5 1682 aa18.54■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Tsen2Q6P7W5 460 aa18.54■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Sgip1Q8VD37 806 aa18.54■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Mrps5Q99N87 432 aaKnown RBP18.53■□□□□ 0.56
Ldb3-207ENSMUST00000227819 Trpm3Q5F4S9 1721 aa18.52■□□□□ 0.56
Ldb3-207ENSMUST00000227819 AceP09470 1312 aa18.52■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Rab11fip3Q8CHD8 1047 aa18.52■□□□□ 0.55
Ldb3-207ENSMUST00000227819 CpzQ8R4V4 654 aa18.52■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Kiaa1107Q80TK0 1369 aa18.51■□□□□ 0.55
Ldb3-207ENSMUST00000227819 TmpoQ61033 693 aaKnown RBP18.51■□□□□ 0.55
Ldb3-207ENSMUST00000227819 RtcbQ99LF4 505 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms