RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Apbb1Q9QXJ1 710 aa10.14□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Tiam2Q6ZPF3 1715 aa10.14□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Aox2Q5SGK3 1345 aa10.14□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Ccdc183A2AJB1 534 aa10.13□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Prdm10Q3UTQ7 1184 aa10.13□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Znf316Q6PGE4 1016 aa10.13□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 TmpoQ61033 693 aaKnown RBP10.13□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Aldh8a1Q8BH00 487 aa10.13□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Atp10bB1AWN4 1474 aa10.13□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Kcna6Q61923 529 aa10.12□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Ppp1r9bQ6R891 817 aaKnown RBP10.12□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Kif2cQ922S8 721 aa10.12□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Gimap6Q8K349 305 aa10.12□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Chmp4bQ9D8B3 224 aaKnown RBP10.12□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Ap3b2Q9JME5 1082 aa10.11□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Col15a1O35206 1367 aa10.11□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Ppp1r37Q8BKR5 712 aa10.11□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 MpripP97434 1024 aa10.11□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Amotl1Q9D4H4 968 aa10.1□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Shank2Q80Z38 1476 aa10.1□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 SkilQ60665 675 aa10.1□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Kcnh5Q920E3 988 aa10.1□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 TimelessQ9R1X4 1197 aa10.1□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Ipo8Q7TMY7 1010 aa10.1□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Usp16Q99LG0 825 aa10.1□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 ScaperF8VQ70 1398 aaKnown RBP10.09□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Pnmal2G3X9N3 661 aa10.09□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Klhdc4Q921I2 584 aa10.09□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Trim27Q62158 513 aa10.08□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 B4galnt3Q6L8S8 986 aa10.08□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Cetn4Q8K4K1 168 aa10.08□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Ak7Q9D2H2 614 aa10.08□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Cnksr1A2A9K7 700 aa10.08□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Rapgef3Q8VCC8 918 aa10.08□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Lrp6O88572 1613 aa10.07□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Kndc1Q0KK55 1742 aa10.07□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Arap2Q8BZ05 1703 aa10.07□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Ccne1Q61457 408 aa10.07□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Ank1Q02357 1862 aa10.07□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Stk36Q69ZM6 1316 aa10.07□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Cyp2d12Q8BVD2 504 aa10.07□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Gsdma3Q5Y4Y6 464 aa10.06□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Mre11Q61216 706 aa10.06□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Amigo3Q8C2S7 508 aa10.06□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Col1a2Q01149 1372 aa10.06□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Abca3Q8R420 1704 aa10.06□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Hoxa7P02830 229 aa10.06□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Slain2Q8CI08 581 aa10.06□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Fnbp4Q6ZQ03 1031 aa10.06□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 HypkQ9CR41 129 aa10.06□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Cyb5rlB1AS42 316 aa10.05□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Ppm1gQ61074 542 aa10.05□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Nkx2-3P97334 362 aa10.05□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 CoilQ5SU73 570 aa10.05□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Kif18aQ91WD7 886 aa10.05□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Flt4P35917 1363 aa10.05□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Wdr63B2RY71 923 aa10.04□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Prim1P20664 417 aa10.04□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Bcl11aQ9QYE3 773 aa10.04□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Aifm3Q3TY86 605 aa10.04□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Tmem119Q8R138 280 aa10.04□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Atg3Q9CPX6 314 aa10.04□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Disp3A3KFU9 1347 aa10.04□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Gm21190A0A0G2JGJ6 266 aa10.04□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Cyp2d11P24457 504 aa10.03□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Sptbn5F6UCX4 1208 aa10.03□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Eif4a1P60843 406 aaKnown RBP10.03□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Dbr1Q923B1 550 aa10.03□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Ccdc27Q3V036 639 aa10.02□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 CenppQ9CZ92 286 aa10.02□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Gcc1Q9D4H2 778 aa10.02□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 CarsQ9ER72 831 aaKnown RBP10.02□□□□□ -0.8
Ccdc60-201ENSMUST00000050178 Tnrc6cQ3UHC0 1690 aaKnown RBP10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Snap23O09044 210 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Mcm2P97310 904 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Ric3Q8BPM6 367 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Dnai1Q8C0M8 701 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Cabp4Q8VHC5 271 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Anapc15-psA0A140T8L6 141 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Gm10093D3YYI8 482 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Hdac1O09106 482 aaKnown RBP10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Rabep1O35551 862 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Map7O88735 730 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Nectin2P32507 530 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Morc2aQ69ZX6 1030 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Cgnl1Q6AW69 1298 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Fam13aQ8BGI4 693 aa10.02□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Greb1lB9EJV3 1913 aa10.01□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Fyb1O35601 819 aa10.01□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 GapdhsQ64467 440 aa10.01□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Tmem132eQ6IEE6 982 aa10.01□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Adcy9P51830 1353 aa10□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Mrc1Q61830 1456 aa10□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Kiaa0232Q80U59 1396 aaKnown RBP10□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 ChgaP26339 463 aaKnown RBP10□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Dnajc10Q9DC23 793 aa10□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Card10P58660 1021 aa10□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Fmnl2A2APV2 1086 aa9.99□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Ric1Q69ZJ7 1422 aa9.99□□□□□ -0.81
Ccdc60-201ENSMUST00000050178 Nutm1Q8BHP2 1126 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms