RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Rimbp3Q3V0F0 1606 aa10.65□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Chpf2Q3UU43 768 aa10.65□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Dzip1Q8BMD2 852 aa10.65□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Dnai1Q8C0M8 701 aa10.65□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Zmym3Q9JLM4 1370 aa10.64□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Ccdc146E9Q9F7 977 aa10.64□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Chl1P70232 1209 aa10.64□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Rtl5Q5DTT4 599 aa10.64□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Trim27Q62158 513 aa10.64□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Ncapd2Q8K2Z4 1392 aa10.64□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 CalcaP70160 136 aa10.64□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Adgrb1Q3UHD1 1582 aa10.63□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Q3TQI7 289 aaKnown RBP10.63□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 TimelessQ9R1X4 1197 aa10.63□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 SkilQ60665 675 aa10.62□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 FanclQ9CR14 375 aa10.62□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 HypkQ9CR41 129 aa10.62□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Nfat5Q9WV30 1534 aa10.62□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Sos1Q62245 1319 aa10.62□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Brd1E9PZ26 1189 aaKnown RBP10.62□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Cyp2d11P24457 504 aa10.62□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Prkar2bP31324 416 aa10.62□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Bcl11aQ9QYE3 773 aa10.62□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Ccdc155Q80VJ8 648 aa10.61□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Sv2bQ8BG39 683 aa10.61□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Farp2Q91VS8 1065 aa10.61□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Gm10471E9Q1C7 252 aa10.61□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Atl3Q91YH5 541 aa10.61□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Msh6P54276 1358 aaKnown RBP10.61□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Phlpp2Q8BXA7 1320 aa10.61□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Scn4aQ9ER60 1841 aa10.61□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Fkbp4P30416 458 aa10.6□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Fgd1P52734 960 aa10.6□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Dixdc1Q80Y83 711 aa10.6□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Tnpo1Q8BFY9 898 aaKnown RBP10.6□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 GorabQ8BRM2 368 aa10.6□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 CarsQ9ER72 831 aaKnown RBP10.6□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Slit2Q9R1B9 1521 aa10.6□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Kif2cQ922S8 721 aa10.6□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Fam13aQ8BGI4 693 aa10.59□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Ppp1r37Q8BKR5 712 aa10.59□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Stk11ipQ3TAA7 1072 aa10.59□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Ano8Q6PB70 1060 aa10.59□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Foxp4Q9DBY0 795 aaKnown RBP10.59□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Nrxn3Q6P9K9 1571 aa10.59□□□□□ -0.71
Ptchd1-201ENSMUST00000038665 Robo1O89026 1612 aa10.58□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Gm21698A0A087WQP8 267 aa10.58□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Gm21671G3UY31 267 aa10.58□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Cavin2Q63918 418 aaKnown RBP10.58□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Ptpn23Q6PB44 1692 aa10.58□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Fmnl2A2APV2 1086 aa10.57□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Ncoa4Q5U4H9 625 aa10.57□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Ppp1r9bQ6R891 817 aaKnown RBP10.57□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Fam50bQ9WTJ8 334 aa10.57□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Nek4Q9Z1J2 792 aa10.57□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Arfgef2A2A5R2 1792 aa10.57□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Wdr63B2RY71 923 aa10.57□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Hspa2P17156 633 aa10.57□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Tbc1d32Q3URV1 1296 aa10.57□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Acsbg1Q99PU5 721 aa10.57□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Ppm1gQ61074 542 aa10.56□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Trpm3Q5F4S9 1721 aa10.56□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Map3k13Q1HKZ5 959 aa10.56□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Atf3Q60765 181 aa10.56□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Disp3A3KFU9 1347 aa10.56□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 TnrQ8BYI9 1358 aa10.56□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Lmtk3Q5XJV6 1424 aa10.56□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Exoc6bA6H5Z3 810 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Igfbp6P47880 238 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Ccdc27Q3V036 639 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Smim5Q8BT42 78 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Rab11fip3Q8CHD8 1047 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Rapgef3Q8VCC8 918 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Tfip11Q9ERA6 838 aaKnown RBP10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Txnrd1Q9JMH6 613 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Col15a1O35206 1367 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Tlr7P58681 1050 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Tbc1d9Q3UYK3 1264 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Gimap6Q8K349 305 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 OptnQ8K3K8 584 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Phlpp1Q8CHE4 1687 aa10.55□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Eif4a1P60843 406 aaKnown RBP10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Zranb3Q6NZP1 1069 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Nup153E9Q3G8 1462 aaKnown RBP10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Pnpla7A2AJ88 1352 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Aox2Q5SGK3 1345 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Sptbn5F6UCX4 1208 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Atf5O70191 283 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 LifrP42703 1092 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Btbd11Q6GQW0 1109 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Kcnh5Q920E3 988 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Amotl1Q9D4H4 968 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Atg4a-psA0A0G2JFS9 396 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Tm6sf1P58749 370 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Kcna6Q61923 529 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Atg4aQ8C9S8 396 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Dmrtc1Q9D9R7 182 aa10.54□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 DaxxO35613 739 aa10.53□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Zap70P43404 618 aa10.53□□□□□ -0.72
Ptchd1-201ENSMUST00000038665 Gsdma3Q5Y4Y6 464 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms