RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Ankrd44B2RXR6 993 aa25.37■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Pibf1E9Q6K3 756 aa25.37■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Hs1bp3Q3TC93 395 aa25.37■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Trpm3Q5F4S9 1721 aa25.36■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Fyb1O35601 819 aa25.36■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Prim1P20664 417 aa25.36■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Ipo8Q7TMY7 1010 aa25.36■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Nrxn3Q6P9K9 1571 aa25.36■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Pnmal2G3X9N3 661 aa25.35■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Adgrb1Q3UHD1 1582 aa25.35■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Larp1bA0A0A6YXJ7 370 aaKnown RBP25.35■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Phlpp1Q8CHE4 1687 aa25.34■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Ric3Q8BPM6 367 aa25.33■■□□□ 1.65
Ctdsp1-201ENSMUST00000027367 Scaf1Q5U4C3 1256 aaKnown RBP25.32■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Wdr17E9Q271 1322 aa25.31■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Ncoa4Q5U4H9 625 aa25.31■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Kif24Q6NWW5 1356 aa25.31■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Nfat5Q9WV30 1534 aa25.31■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Ahnak2E9PYB0 1738 aaKnown RBP25.31■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Chl1P70232 1209 aa25.3■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 TimelessQ9R1X4 1197 aa25.3■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Robo1O89026 1612 aa25.3■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Gimap6Q8K349 305 aa25.3■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 HypkQ9CR41 129 aa25.3■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Slain2Q8CI08 581 aa25.3■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 TatQ8QZR1 454 aa25.29■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Arfgef2A2A5R2 1792 aa25.29■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Aifm3Q3TY86 605 aa25.29■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Chmp4bQ9D8B3 224 aaKnown RBP25.29■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Rab11fip3Q8CHD8 1047 aa25.28■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 SkilQ60665 675 aa25.27■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Hsp90ab1P11499 724 aaKnown RBP25.27■■□□□ 1.64
Ctdsp1-201ENSMUST00000027367 Phlpp2Q8BXA7 1320 aa25.26■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Aplp1Q03157 653 aa25.26■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Evi5lH3BKQ3 813 aa25.25■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Ppm1gQ61074 542 aa25.25■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Dnai1Q8C0M8 701 aa25.25■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Tmc1Q8R4P5 757 aa25.25■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Dnajc10Q9DC23 793 aa25.23■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Amotl2Q8K371 772 aa25.23■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Kcnh5Q920E3 988 aa25.23■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Eif2s2Q99L45 331 aaKnown RBP25.23■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Gsdma3Q5Y4Y6 464 aa25.22■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Gtf3c5Q8R2T8 520 aa25.21■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Kif18aQ91WD7 886 aa25.2■■□□□ 1.63
Ctdsp1-201ENSMUST00000027367 Kdm6aO70546 1401 aa25.2■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Igsf1Q7TQA1 1317 aa25.2■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Map7O88735 730 aa25.2■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Siglec1Q62230 1695 aa25.19■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Brd1E9PZ26 1189 aaKnown RBP25.19■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Wwc1Q5SXA9 1104 aa25.19■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 BccipQ9CWI3 316 aa25.19■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Foxp4Q9DBY0 795 aaKnown RBP25.19■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Msh6P54276 1358 aaKnown RBP25.19■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Fmnl2A2APV2 1086 aa25.19■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Aldh1l2Q8K009 923 aa25.18■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Sv2bQ8BG39 683 aa25.17■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Farp2Q91VS8 1065 aa25.17■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Q3TQI7 289 aaKnown RBP25.17■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Trim27Q62158 513 aa25.17■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Wnk3Q80XP9 1757 aa25.16■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 GnpatP98192 678 aa25.16■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Kcna6Q61923 529 aa25.15■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Amotl1Q9D4H4 968 aa25.15■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Col18a1P39061 1774 aa25.15■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Triml2E9PW10 424 aa25.14■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Dzip1Q8BMD2 852 aa25.14■■□□□ 1.62
Ctdsp1-201ENSMUST00000027367 Cog6Q8R3I3 657 aa25.14■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Nup153E9Q3G8 1462 aaKnown RBP25.13■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 LifrP42703 1092 aa25.13■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Tbc1d32Q3URV1 1296 aa25.13■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Fam83gQ5SWY7 812 aa25.13■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Phf14Q9D4H9 881 aa25.13■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Phf23Q8BSN5 401 aa25.12■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 CarsQ9ER72 831 aaKnown RBP25.12■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 TnrQ8BYI9 1358 aa25.12■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Cyp2d12Q8BVD2 504 aa25.11■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Kif20aP97329 887 aa25.11■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Cetn4Q8K4K1 168 aa25.1■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 HnrnpuQ8VEK3 800 aaKnown RBP25.1■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Chpf2Q3UU43 768 aa25.1■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Ppp1r9bQ6R891 817 aaKnown RBP25.1■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Myo5bP21271 1818 aa25.1■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Nid2O88322 1403 aa25.09■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Mfap1aC0HKD8 439 aaKnown RBP25.09■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Mfap1bC0HKD9 439 aaKnown RBP25.09■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Tm6sf1P58749 370 aa25.09■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 KnstrnQ9D9Z1 312 aaKnown RBP25.09■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Atf5O70191 283 aa25.09■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Scn4aQ9ER60 1841 aa25.08■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Tnnt1O88346 262 aa25.08■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Prkar2bP31324 416 aa25.08■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Ddx17Q501J6 650 aaKnown RBP25.08■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Ppp1r37Q8BKR5 712 aa25.08■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Rapgef3Q8VCC8 918 aa25.08■■□□□ 1.61
Ctdsp1-201ENSMUST00000027367 Atf3Q60765 181 aa25.07■■□□□ 1.6
Ctdsp1-201ENSMUST00000027367 Gli3Q61602 1583 aa25.07■■□□□ 1.6
Ctdsp1-201ENSMUST00000027367 ArxO35085 564 aa25.07■■□□□ 1.6
Ctdsp1-201ENSMUST00000027367 Dixdc1Q80Y83 711 aa25.07■■□□□ 1.6
Ctdsp1-201ENSMUST00000027367 Fam13aQ8BGI4 693 aa25.06■■□□□ 1.6
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms