RNA–Protein interactions for RNA: ENSMUST00000020200.13

Cfap54-201, Transcript of Cilia- and flagella-associated protein 54, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cfap54, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54-201ENSMUST00000020200 Rimbp3Q3V0F0 1606 aa13.73□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Mfap1aC0HKD8 439 aaKnown RBP13.73□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Mfap1bC0HKD9 439 aaKnown RBP13.73□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Dnajc5P60904 198 aa13.73□□□□□ -0.21
Cfap54-201ENSMUST00000020200 GnpatP98192 678 aa13.73□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Brd1E9PZ26 1189 aaKnown RBP13.72□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Fam83gQ5SWY7 812 aa13.72□□□□□ -0.21
Cfap54-201ENSMUST00000020200 TimelessQ9R1X4 1197 aa13.72□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Slit2Q9R1B9 1521 aa13.72□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Wdr17E9Q271 1322 aa13.72□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Q3TQI7 289 aaKnown RBP13.72□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Trim27Q62158 513 aa13.72□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Sv2bQ8BG39 683 aa13.71□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Cyp2d12Q8BVD2 504 aa13.71□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Adgrb1Q3UHD1 1582 aa13.71□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Ncoa4Q5U4H9 625 aa13.71□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Ahnak2E9PYB0 1738 aaKnown RBP13.71□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Zfp777B9EKF4 885 aa13.7□□□□□ -0.22
Cfap54-201ENSMUST00000020200 PrkcshO08795 521 aa13.7□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Cc2d1aQ8K1A6 943 aa13.7□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Foxp4Q9DBY0 795 aaKnown RBP13.7□□□□□ -0.22
Cfap54-201ENSMUST00000020200 CarsQ9ER72 831 aaKnown RBP13.7□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Map7O88735 730 aa13.69□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Ppp1r9bQ6R891 817 aaKnown RBP13.69□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Rab11fip3Q8CHD8 1047 aa13.69□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Gimap6Q8K349 305 aa13.69□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Fgd1P52734 960 aa13.69□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Tbc1d32Q3URV1 1296 aa13.69□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Ptpn23Q6PB44 1692 aa13.69□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Alpk3Q924C5 1678 aa13.69□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Hsp90aa1P07901 733 aaKnown RBP13.68□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Prkar2bP31324 416 aa13.68□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Nkx2-3P97334 362 aa13.68□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Chpf2Q3UU43 768 aa13.68□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Tmc1Q8R4P5 757 aa13.68□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Nfat5Q9WV30 1534 aa13.68□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Ccdc146E9Q9F7 977 aa13.68□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Dzip1Q8BMD2 852 aa13.68□□□□□ -0.22
Cfap54-201ENSMUST00000020200 FanclQ9CR14 375 aa13.68□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Rad17Q6NXW6 688 aa13.67□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Tnpo1Q8BFY9 898 aaKnown RBP13.67□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Smarca5Q91ZW3 1051 aaKnown RBP13.67□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Chmp4bQ9D8B3 224 aaKnown RBP13.67□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Wwc1Q5SXA9 1104 aa13.67□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Ccdc9Q8VC31 543 aaKnown RBP13.67□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Farp2Q91VS8 1065 aa13.67□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Msh6P54276 1358 aaKnown RBP13.67□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Trpm3Q5F4S9 1721 aa13.67□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Arfgef2A2A5R2 1792 aa13.66□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Fmnl2A2APV2 1086 aa13.66□□□□□ -0.22
Cfap54-201ENSMUST00000020200 LifrP42703 1092 aa13.66□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Gsdma3Q5Y4Y6 464 aa13.66□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Pip4k2bQ80XI4 416 aa13.66□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Fam13aQ8BGI4 693 aa13.66□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Kcnh5Q920E3 988 aa13.66□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Nrxn3Q6P9K9 1571 aa13.66□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Wdr63B2RY71 923 aa13.66□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Phf23Q8BSN5 401 aa13.66□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Aldh1l2Q8K009 923 aa13.66□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Arhgef1Q61210 920 aaKnown RBP13.65□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Kif2cQ922S8 721 aa13.65□□□□□ -0.22
Cfap54-201ENSMUST00000020200 Igsf1Q7TQA1 1317 aa13.64□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Tm6sf1P58749 370 aa13.64□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Amotl1Q9D4H4 968 aa13.64□□□□□ -0.23
Cfap54-201ENSMUST00000020200 KnstrnQ9D9Z1 312 aaKnown RBP13.64□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Sptbn5F6UCX4 1208 aa13.64□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Dixdc1Q80Y83 711 aa13.64□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Ppp1r37Q8BKR5 712 aa13.64□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Atf5O70191 283 aa13.63□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Eif4g2Q62448 906 aaKnown RBP13.63□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Robo1O89026 1612 aa13.63□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Rabep1O35551 862 aa13.63□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Cyp2d11P24457 504 aa13.63□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Mre11Q61216 706 aa13.63□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Cetn4Q8K4K1 168 aa13.63□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Nek4Q9Z1J2 792 aa13.63□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Gm10471E9Q1C7 252 aa13.62□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Amigo3Q8C2S7 508 aa13.62□□□□□ -0.23
Cfap54-201ENSMUST00000020200 HnrnpuQ8VEK3 800 aaKnown RBP13.62□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Bcl2l13P59017 434 aa13.62□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Kcna6Q61923 529 aa13.62□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Tbc1d9Q3UYK3 1264 aa13.61□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Unc13bQ9Z1N9 1602 aa13.61□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Kdm6aO70546 1401 aa13.61□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Fkbp4P30416 458 aa13.61□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Atf3Q60765 181 aa13.61□□□□□ -0.23
Cfap54-201ENSMUST00000020200 GorabQ8BRM2 368 aa13.61□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Nup153E9Q3G8 1462 aaKnown RBP13.6□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Eif4a1P60843 406 aaKnown RBP13.6□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Rapgef3Q8VCC8 918 aa13.6□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Disp3A3KFU9 1347 aa13.6□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Phlpp1Q8CHE4 1687 aa13.6□□□□□ -0.23
Cfap54-201ENSMUST00000020200 TnrQ8BYI9 1358 aa13.59□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Ccdc155Q80VJ8 648 aa13.59□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Pnpla7A2AJ88 1352 aa13.59□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Col15a1O35206 1367 aa13.59□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Btbd11Q6GQW0 1109 aa13.59□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Aldh8a1Q8BH00 487 aa13.59□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Gm21698A0A087WQP8 267 aa13.58□□□□□ -0.23
Cfap54-201ENSMUST00000020200 Atg4a-psA0A0G2JFS9 396 aa13.58□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms