RNA–Protein interactions for RNA: ENSMUST00000020200.13

Cfap54-201, Transcript of Cilia- and flagella-associated protein 54, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cfap54, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54-201ENSMUST00000020200 NischQ80TM9 1593 aa21.78■■□□□ 1.08
Cfap54-201ENSMUST00000020200 Gm35339A0A140LHH9 1649 aa21.4■■□□□ 1.02
Cfap54-201ENSMUST00000020200 Abcc9P70170 1546 aa21.1■□□□□ 0.97
Cfap54-201ENSMUST00000020200 Abcc8B2RUS7 1588 aa20.73■□□□□ 0.91
Cfap54-201ENSMUST00000020200 Rhox8Q6VSS7 320 aa20.12■□□□□ 0.81
Cfap54-201ENSMUST00000020200 ScribQ80U72 1612 aa19.47■□□□□ 0.71
Cfap54-201ENSMUST00000020200 Rtl1Q7M732 1744 aa19.31■□□□□ 0.68
Cfap54-201ENSMUST00000020200 Dcaf1Q80TR8 1506 aa19.17■□□□□ 0.66
Cfap54-201ENSMUST00000020200 Rb1cc1Q9ESK9 1588 aa19.07■□□□□ 0.64
Cfap54-201ENSMUST00000020200 Kdm5dQ62240 1548 aa19.05■□□□□ 0.64
Cfap54-201ENSMUST00000020200 Ccdc180J3QNE4 1664 aa18.98■□□□□ 0.63
Cfap54-201ENSMUST00000020200 NacadQ5SWP3 1504 aa18.88■□□□□ 0.61
Cfap54-201ENSMUST00000020200 Zcchc6Q5BLK4 1491 aaKnown RBP18.85■□□□□ 0.61
Cfap54-201ENSMUST00000020200 Baz1aO88379 1555 aa18.8■□□□□ 0.6
Cfap54-201ENSMUST00000020200 Ccdc136Q3TVA9 1136 aa18.74■□□□□ 0.59
Cfap54-201ENSMUST00000020200 Sycp2Q9CUU3 1500 aa18.49■□□□□ 0.55
Cfap54-201ENSMUST00000020200 Crybg2B7ZCC2 1516 aa18.42■□□□□ 0.54
Cfap54-201ENSMUST00000020200 Smarca2Q6DIC0 1577 aa18.36■□□□□ 0.53
Cfap54-201ENSMUST00000020200 HrcG5E8J6 738 aa18.2■□□□□ 0.5
Cfap54-201ENSMUST00000020200 Trim41Q5NCC3 630 aa18.2■□□□□ 0.5
Cfap54-201ENSMUST00000020200 BicraF8VPZ9 1578 aa18.16■□□□□ 0.5
Cfap54-201ENSMUST00000020200 Cecr2E9Q2Z1 1453 aa18.1■□□□□ 0.49
Cfap54-201ENSMUST00000020200 Brd4Q9ESU6 1400 aaKnown RBP17.92■□□□□ 0.46
Cfap54-201ENSMUST00000020200 Cngb1E1AZ71 1325 aa17.9■□□□□ 0.46
Cfap54-201ENSMUST00000020200 Synj1Q8CHC4 1574 aa17.85■□□□□ 0.45
Cfap54-201ENSMUST00000020200 Ehmt2Q9Z148 1263 aaKnown RBP17.84■□□□□ 0.45
Cfap54-201ENSMUST00000020200 Chic1Q8CBW7 227 aa17.77■□□□□ 0.43
Cfap54-201ENSMUST00000020200 CftrP26361 1476 aa17.75■□□□□ 0.43
Cfap54-201ENSMUST00000020200 Cep164Q5DU05 1446 aa17.74■□□□□ 0.43
Cfap54-201ENSMUST00000020200 Esf1Q3V1V3 845 aaKnown RBP17.72■□□□□ 0.43
Cfap54-201ENSMUST00000020200 Rsf1E9PWW9 1441 aaKnown RBP17.71■□□□□ 0.43
Cfap54-201ENSMUST00000020200 Golga3P55937 1487 aa17.69■□□□□ 0.42
Cfap54-201ENSMUST00000020200 Smarca4Q3TKT4 1613 aaKnown RBP17.64■□□□□ 0.41
Cfap54-201ENSMUST00000020200 Ccdc88bQ4QRL3 1481 aa17.64■□□□□ 0.41
Cfap54-201ENSMUST00000020200 Gab3Q8BSM5 595 aa17.62■□□□□ 0.41
Cfap54-201ENSMUST00000020200 Cttnbp2B9EJA2 1648 aa17.6■□□□□ 0.41
Cfap54-201ENSMUST00000020200 Rpgrip1Q9EPQ2 1331 aa17.49■□□□□ 0.39
Cfap54-201ENSMUST00000020200 Top2bQ64511 1612 aa17.49■□□□□ 0.39
Cfap54-201ENSMUST00000020200 Acin1Q9JIX8 1338 aaKnown RBP17.45■□□□□ 0.38
Cfap54-201ENSMUST00000020200 Iqgap2Q3UQ44 1575 aa17.45■□□□□ 0.38
Cfap54-201ENSMUST00000020200 Cc2d2aQ8CFW7 1633 aa17.4■□□□□ 0.38
Cfap54-201ENSMUST00000020200 Atad2bE9Q166 1460 aaKnown RBP17.39■□□□□ 0.37
Cfap54-201ENSMUST00000020200 Pds5bQ4VA53 1446 aaKnown RBP17.33■□□□□ 0.36
Cfap54-201ENSMUST00000020200 Fmn1Q05860 1466 aa17.23■□□□□ 0.35
Cfap54-201ENSMUST00000020200 Frmpd1A2AKB4 1549 aa17.17■□□□□ 0.34
Cfap54-201ENSMUST00000020200 Top2aQ01320 1528 aaKnown RBP17.13■□□□□ 0.33
Cfap54-201ENSMUST00000020200 Wdr62Q3U3T8 1523 aa17.11■□□□□ 0.33
Cfap54-201ENSMUST00000020200 Rapgef2Q8CHG7 1496 aa17.06■□□□□ 0.32
Cfap54-201ENSMUST00000020200 Ercc6F8VPZ5 1481 aa17.03■□□□□ 0.32
Cfap54-201ENSMUST00000020200 Myt1lP97500 1187 aa17.02■□□□□ 0.32
Cfap54-201ENSMUST00000020200 Npm2Q80W85 207 aa16.99■□□□□ 0.31
Cfap54-201ENSMUST00000020200 Il27Q8K3I6 234 aa16.99■□□□□ 0.31
Cfap54-201ENSMUST00000020200 TnnQ80Z71 1560 aa16.99■□□□□ 0.31
Cfap54-201ENSMUST00000020200 Cep162Q6ZQ06 1403 aa16.97■□□□□ 0.31
Cfap54-201ENSMUST00000020200 Unc13aQ4KUS2 1712 aa16.96■□□□□ 0.31
Cfap54-201ENSMUST00000020200 Kif15Q6P9L6 1387 aa16.96■□□□□ 0.31
Cfap54-201ENSMUST00000020200 Lamc3Q9R0B6 1581 aa16.91■□□□□ 0.3
Cfap54-201ENSMUST00000020200 PtprkP35822 1457 aa16.85■□□□□ 0.29
Cfap54-201ENSMUST00000020200 Mier1Q5UAK0 511 aa16.85■□□□□ 0.29
Cfap54-201ENSMUST00000020200 Thoc2B1AZI6 1594 aaKnown RBP16.81■□□□□ 0.28
Cfap54-201ENSMUST00000020200 UbtfP25976 765 aaKnown RBP16.8■□□□□ 0.28
Cfap54-201ENSMUST00000020200 Phldb1Q6PDH0 1371 aaKnown RBP16.79■□□□□ 0.28
Cfap54-201ENSMUST00000020200 Eif4g1Q6NZJ6 1600 aaKnown RBP16.78■□□□□ 0.28
Cfap54-201ENSMUST00000020200 Ubl4bQ9CQ84 188 aa16.78■□□□□ 0.28
Cfap54-201ENSMUST00000020200 Camsap1A2AHC3 1581 aa16.78■□□□□ 0.28
Cfap54-201ENSMUST00000020200 Arhgap35Q91YM2 1499 aa16.74■□□□□ 0.27
Cfap54-201ENSMUST00000020200 Clip1Q922J3 1391 aa16.71■□□□□ 0.27
Cfap54-201ENSMUST00000020200 Cux2P70298 1426 aa16.7■□□□□ 0.26
Cfap54-201ENSMUST00000020200 Ccdc18Q640L5 1455 aa16.7■□□□□ 0.26
Cfap54-201ENSMUST00000020200 NrkQ9R0G8 1455 aa16.7■□□□□ 0.26
Cfap54-201ENSMUST00000020200 Plekhg3Q4VAC9 1341 aa16.69■□□□□ 0.26
Cfap54-201ENSMUST00000020200 Shroom4Q1W617 1475 aa16.68■□□□□ 0.26
Cfap54-201ENSMUST00000020200 Zeb1Q64318 1117 aa16.67■□□□□ 0.26
Cfap54-201ENSMUST00000020200 Grin2bQ01097 1482 aa16.66■□□□□ 0.26
Cfap54-201ENSMUST00000020200 Npm1Q61937 292 aaKnown RBP16.64■□□□□ 0.26
Cfap54-201ENSMUST00000020200 Ap3b1Q9Z1T1 1105 aa16.62■□□□□ 0.25
Cfap54-201ENSMUST00000020200 Pcgf6Q99NA9 353 aa16.62■□□□□ 0.25
Cfap54-201ENSMUST00000020200 Fam135aQ6NS59 1506 aa16.6■□□□□ 0.25
Cfap54-201ENSMUST00000020200 NefmP08553 848 aa16.58■□□□□ 0.24
Cfap54-201ENSMUST00000020200 Baz1bQ9Z277 1479 aa16.55■□□□□ 0.24
Cfap54-201ENSMUST00000020200 Dnajc5bQ9CQ94 199 aa16.55■□□□□ 0.24
Cfap54-201ENSMUST00000020200 Supt5hO55201 1082 aaKnown RBP16.53■□□□□ 0.24
Cfap54-201ENSMUST00000020200 Arap1Q4LDD4 1452 aa16.53■□□□□ 0.24
Cfap54-201ENSMUST00000020200 Eea1Q8BL66 1411 aa16.53■□□□□ 0.24
Cfap54-201ENSMUST00000020200 LrpprcQ6PB66 1392 aaKnown RBP16.53■□□□□ 0.24
Cfap54-201ENSMUST00000020200 Mroh2bQ7M6Y6 1581 aa16.53■□□□□ 0.24
Cfap54-201ENSMUST00000020200 Setd5Q5XJV7 1441 aa16.52■□□□□ 0.24
Cfap54-201ENSMUST00000020200 Map3k1P53349 1493 aa16.51■□□□□ 0.23
Cfap54-201ENSMUST00000020200 Duox2A2AQ99 1517 aa16.47■□□□□ 0.23
Cfap54-201ENSMUST00000020200 PogzQ8BZH4 1409 aaKnown RBP16.47■□□□□ 0.23
Cfap54-201ENSMUST00000020200 Efcab5A0JP43 1406 aa16.45■□□□□ 0.22
Cfap54-201ENSMUST00000020200 Arhgef5E9Q7D5 1581 aa16.42■□□□□ 0.22
Cfap54-201ENSMUST00000020200 Dhx29Q6PGC1 1365 aaKnown RBP16.41■□□□□ 0.22
Cfap54-201ENSMUST00000020200 Ankrd26Q811D2 1581 aa16.39■□□□□ 0.21
Cfap54-201ENSMUST00000020200 AqrQ8CFQ3 1481 aaKnown RBP16.37■□□□□ 0.21
Cfap54-201ENSMUST00000020200 Samd9lQ69Z37 1561 aa16.36■□□□□ 0.21
Cfap54-201ENSMUST00000020200 Ncapd3Q6ZQK0 1506 aa16.36■□□□□ 0.21
Cfap54-201ENSMUST00000020200 Cux1P53564 1515 aa16.35■□□□□ 0.21
Cfap54-201ENSMUST00000020200 Rad54l2Q99NG0 1466 aa16.34■□□□□ 0.21
Cfap54-201ENSMUST00000020200 Carmil1Q6EDY6 1374 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms