RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Paxip1Q6NZQ4 1056 aa14.03□□□□□ -0.16
Vps54-201ENSMUST00000006221 Gcc1Q9D4H2 778 aa14.03□□□□□ -0.16
Vps54-201ENSMUST00000006221 Kif20bQ80WE4 1774 aaKnown RBP14.03□□□□□ -0.16
Vps54-201ENSMUST00000006221 Gemin5Q8BX17 1502 aaKnown RBP14.03□□□□□ -0.16
Vps54-201ENSMUST00000006221 Phf23Q8BSN5 401 aa14.03□□□□□ -0.16
Vps54-201ENSMUST00000006221 Aldh1l2Q8K009 923 aa14.03□□□□□ -0.16
Vps54-201ENSMUST00000006221 Anapc15-psA0A140T8L6 141 aa14.02□□□□□ -0.16
Vps54-201ENSMUST00000006221 Znf692Q3U381 531 aa14.02□□□□□ -0.16
Vps54-201ENSMUST00000006221 Casq1O09165 405 aa14.01□□□□□ -0.17
Vps54-201ENSMUST00000006221 Hoxb7P09024 217 aa14.01□□□□□ -0.17
Vps54-201ENSMUST00000006221 1700010I14RikQ7TPG0 532 aa14.01□□□□□ -0.17
Vps54-201ENSMUST00000006221 Bag4Q8CI61 457 aa14.01□□□□□ -0.17
Vps54-201ENSMUST00000006221 Rsph4aQ8BYM7 716 aa14.01□□□□□ -0.17
Vps54-201ENSMUST00000006221 Q9D2X8 372 aa14□□□□□ -0.17
Vps54-201ENSMUST00000006221 Sox12Q04890 314 aa14□□□□□ -0.17
Vps54-201ENSMUST00000006221 Fam83gQ5SWY7 812 aa14□□□□□ -0.17
Vps54-201ENSMUST00000006221 Prune1Q8BIW1 454 aa14□□□□□ -0.17
Vps54-201ENSMUST00000006221 Dnajc5gQ8C632 165 aa14□□□□□ -0.17
Vps54-201ENSMUST00000006221 Chmp4cQ9D7F7 232 aa14□□□□□ -0.17
Vps54-201ENSMUST00000006221 Bcar3Q9QZK2 820 aa14□□□□□ -0.17
Vps54-201ENSMUST00000006221 Rasa1E9PYG6 1038 aa13.99□□□□□ -0.17
Vps54-201ENSMUST00000006221 Kif20aP97329 887 aa13.99□□□□□ -0.17
Vps54-201ENSMUST00000006221 Nckap5lQ6GQX2 1323 aa13.99□□□□□ -0.17
Vps54-201ENSMUST00000006221 Adgrb1Q3UHD1 1582 aa13.98□□□□□ -0.17
Vps54-201ENSMUST00000006221 Dip2bQ3UH60 1574 aa13.98□□□□□ -0.17
Vps54-201ENSMUST00000006221 Cyp27a1Q9DBG1 533 aa13.98□□□□□ -0.17
Vps54-201ENSMUST00000006221 Cyp46a1Q9WVK8 500 aa13.98□□□□□ -0.17
Vps54-201ENSMUST00000006221 RictorQ6QI06 1708 aa13.98□□□□□ -0.17
Vps54-201ENSMUST00000006221 Sv2bQ8BG39 683 aa13.98□□□□□ -0.17
Vps54-201ENSMUST00000006221 Mdc1Q5PSV9 1707 aa13.98□□□□□ -0.17
Vps54-201ENSMUST00000006221 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.97□□□□□ -0.17
Vps54-201ENSMUST00000006221 Mcm2P97310 904 aa13.97□□□□□ -0.17
Vps54-201ENSMUST00000006221 Tmx3Q8BXZ1 456 aa13.97□□□□□ -0.17
Vps54-201ENSMUST00000006221 Tet3Q8BG87 1668 aa13.97□□□□□ -0.17
Vps54-201ENSMUST00000006221 Q3UJC8 639 aa13.96□□□□□ -0.17
Vps54-201ENSMUST00000006221 Gdpd2Q9ESM6 539 aa13.96□□□□□ -0.17
Vps54-201ENSMUST00000006221 Zdhhc9P59268 364 aa13.96□□□□□ -0.17
Vps54-201ENSMUST00000006221 Gtf2a1Q99PM3 378 aa13.96□□□□□ -0.17
Vps54-201ENSMUST00000006221 Cps1Q8C196 1500 aa13.96□□□□□ -0.17
Vps54-201ENSMUST00000006221 Parp14Q2EMV9 1817 aa13.96□□□□□ -0.17
Vps54-201ENSMUST00000006221 Eya1P97767 591 aa13.96□□□□□ -0.18
Vps54-201ENSMUST00000006221 Tnrc6bQ8BKI2 1810 aaKnown RBP13.96□□□□□ -0.18
Vps54-201ENSMUST00000006221 Med1Q925J9 1575 aa13.95□□□□□ -0.18
Vps54-201ENSMUST00000006221 Astn2Q80Z10 1352 aa13.95□□□□□ -0.18
Vps54-201ENSMUST00000006221 Zkscan16A2ALW2 728 aa13.95□□□□□ -0.18
Vps54-201ENSMUST00000006221 Rtf1A2AQ19 715 aaKnown RBP13.95□□□□□ -0.18
Vps54-201ENSMUST00000006221 Plppr3Q7TPB0 716 aa13.94□□□□□ -0.18
Vps54-201ENSMUST00000006221 Srgap3Q812A2 1099 aa13.94□□□□□ -0.18
Vps54-201ENSMUST00000006221 Zkscan1Q8BGS3 561 aaKnown RBP13.94□□□□□ -0.18
Vps54-201ENSMUST00000006221 Cabp4Q8VHC5 271 aa13.94□□□□□ -0.18
Vps54-201ENSMUST00000006221 Ccne1Q61457 408 aa13.93□□□□□ -0.18
Vps54-201ENSMUST00000006221 Idi1P58044 227 aa13.93□□□□□ -0.18
Vps54-201ENSMUST00000006221 Ppp1r42Q8R1Z4 357 aa13.93□□□□□ -0.18
Vps54-201ENSMUST00000006221 RestQ8VIG1 1082 aa13.93□□□□□ -0.18
Vps54-201ENSMUST00000006221 Elp1Q7TT37 1333 aaKnown RBP13.93□□□□□ -0.18
Vps54-201ENSMUST00000006221 FancaQ9JL70 1439 aa13.93□□□□□ -0.18
Vps54-201ENSMUST00000006221 Erc2Q6PH08 957 aa13.93□□□□□ -0.18
Vps54-201ENSMUST00000006221 Gm9992B2RWK3 458 aa13.92□□□□□ -0.18
Vps54-201ENSMUST00000006221 Unc93aQ710D3 458 aa13.92□□□□□ -0.18
Vps54-201ENSMUST00000006221 Tnnt1O88346 262 aa13.92□□□□□ -0.18
Vps54-201ENSMUST00000006221 Isy1Q69ZQ2 285 aaKnown RBP13.92□□□□□ -0.18
Vps54-201ENSMUST00000006221 Irx6Q9ER75 438 aa13.92□□□□□ -0.18
Vps54-201ENSMUST00000006221 PzpQ61838 1495 aa13.92□□□□□ -0.18
Vps54-201ENSMUST00000006221 Trim44Q9QXA7 346 aa13.92□□□□□ -0.18
Vps54-201ENSMUST00000006221 Gm21190A0A0G2JGJ6 266 aa13.91□□□□□ -0.18
Vps54-201ENSMUST00000006221 Q3TQI7 289 aaKnown RBP13.91□□□□□ -0.18
Vps54-201ENSMUST00000006221 Nlgn1Q99K10 843 aa13.91□□□□□ -0.18
Vps54-201ENSMUST00000006221 Hmox1P14901 289 aa13.91□□□□□ -0.18
Vps54-201ENSMUST00000006221 Tshz3Q8CGV9 1081 aa13.91□□□□□ -0.18
Vps54-201ENSMUST00000006221 Gnai2P08752 355 aaKnown RBP13.91□□□□□ -0.18
Vps54-201ENSMUST00000006221 Dennd6aQ8BH65 605 aa13.91□□□□□ -0.18
Vps54-201ENSMUST00000006221 Cyp2d12Q8BVD2 504 aa13.91□□□□□ -0.18
Vps54-201ENSMUST00000006221 Camta1A2A891 1682 aa13.9□□□□□ -0.18
Vps54-201ENSMUST00000006221 Nphp1Q9QY53 687 aa13.9□□□□□ -0.18
Vps54-201ENSMUST00000006221 Msh6P54276 1358 aaKnown RBP13.9□□□□□ -0.18
Vps54-201ENSMUST00000006221 CemipQ8BI06 1361 aa13.89□□□□□ -0.19
Vps54-201ENSMUST00000006221 Ptpdc1Q6NZK8 747 aa13.89□□□□□ -0.19
Vps54-201ENSMUST00000006221 Gadd45bP22339 160 aa13.89□□□□□ -0.19
Vps54-201ENSMUST00000006221 Cwc27Q3TKY6 469 aa13.89□□□□□ -0.19
Vps54-201ENSMUST00000006221 Phactr2B1AVP0 632 aa13.89□□□□□ -0.19
Vps54-201ENSMUST00000006221 Cdk12Q14AX6 1484 aaKnown RBP13.89□□□□□ -0.19
Vps54-201ENSMUST00000006221 Tmem132eQ6IEE6 982 aa13.89□□□□□ -0.19
Vps54-201ENSMUST00000006221 Mmp8O70138 465 aa13.88□□□□□ -0.19
Vps54-201ENSMUST00000006221 Slit3Q9WVB4 1523 aa13.88□□□□□ -0.19
Vps54-201ENSMUST00000006221 Sirt1Q923E4 737 aa13.88□□□□□ -0.19
Vps54-201ENSMUST00000006221 Ap3b2Q9JME5 1082 aa13.88□□□□□ -0.19
Vps54-201ENSMUST00000006221 Pik3c2aQ61194 1686 aa13.88□□□□□ -0.19
Vps54-201ENSMUST00000006221 N4bp2F8VQG7 1678 aaKnown RBP13.88□□□□□ -0.19
Vps54-201ENSMUST00000006221 Foxp4Q9DBY0 795 aaKnown RBP13.88□□□□□ -0.19
Vps54-201ENSMUST00000006221 NalcnQ8BXR5 1738 aa13.88□□□□□ -0.19
Vps54-201ENSMUST00000006221 Chpf2Q3UU43 768 aa13.87□□□□□ -0.19
Vps54-201ENSMUST00000006221 Mrps27Q8BK72 415 aaKnown RBP13.87□□□□□ -0.19
Vps54-201ENSMUST00000006221 Map2P20357 1828 aa13.87□□□□□ -0.19
Vps54-201ENSMUST00000006221 Zkscan2G3X952 960 aa13.87□□□□□ -0.19
Vps54-201ENSMUST00000006221 Ubr1O70481 1757 aa13.87□□□□□ -0.19
Vps54-201ENSMUST00000006221 Vwa3bJ9JI28 736 aa13.87□□□□□ -0.19
Vps54-201ENSMUST00000006221 Cyp2d11P24457 504 aa13.87□□□□□ -0.19
Vps54-201ENSMUST00000006221 Tpx2A2APB8 745 aaKnown RBP13.86□□□□□ -0.19
Vps54-201ENSMUST00000006221 Cpa2Q504N0 417 aa13.86□□□□□ -0.19
Vps54-201ENSMUST00000006221 Rrp9Q91WM3 475 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms