RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 LaynQ8C351 381 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfr170Q8VGL6 313 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cpt1bQ924X2 772 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Bap1Q99PU7 728 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Usp21Q9QZL6 566 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Astn1Q61137 1302 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Duox1A2AQ92 1551 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Alas2P08680 587 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pcsk2P21661 637 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Mov10P23249 1004 aaKnown RBP16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Lin54Q571G4 749 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ppp2r2bQ6ZWR4 443 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pum1Q80U78 1189 aaKnown RBP16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Trmt6Q8CE96 497 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Atg13Q91YI1 516 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Adam18Q9R157 719 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Slc28a1E9PXX9 648 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 DhfrP00375 187 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Psen1P49769 467 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cpne9Q1RLL3 553 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ints5Q8CHT3 1018 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Sirt2Q8VDQ8 389 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Chrac1Q9JKP8 129 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Rab21P35282 222 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Slc17a7Q3TXX4 560 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Usp30Q3UN04 517 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Paqr5Q9DCU0 330 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Acot2Q9QYR9 453 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm21885A0A286YDN8 145 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Fam46dB1ATX6 390 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Grpel2O88396 224 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Npr1P18293 1057 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 TdgP56581 421 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Phactr4Q501J7 694 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Psd4Q8BLR5 1005 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfr706Q9EPF8 316 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 AnkhQ9JHZ2 492 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Znf609Q8BZ47 1413 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm595A2AF73 655 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 S100a2J3QMC7 104 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Aif1O70200 147 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ripk1Q60855 656 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 DseQ8BLI4 958 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tgm6Q8BM11 706 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Elmo3Q8BYZ7 720 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Kremen1Q99N43 473 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Actrt2Q9D9L5 377 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Robo1O89026 1612 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Slc6a21A0A1B0GSD2 748 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 LgmnO89017 435 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cldn11Q60771 207 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 MogQ61885 246 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Slc9a9Q8BZ00 644 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tprg1Q8CB49 279 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 SynpoQ8CC35 929 aaKnown RBP16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Fnbp1lQ8K012 605 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cyp4f3Q99N16 524 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Rasgef1cQ9D300 466 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Epm2aQ9WUA5 330 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Btbd19S4R1I0 287 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Kcna10B2RQA1 511 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 UcmaQ14BU0 138 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Arhgap9Q1HDU4 648 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Rps9Q6ZWN5 194 aaKnown RBP16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfr801Q8VEU1 318 aa16.49■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Smim17A0A504 109 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm13040A2A8C4 496 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Vmn1r2A2AMT6 306 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Bnip2O54940 326 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Taar7fQ5QD08 358 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Taar7eQ5QD09 358 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Taar7bQ5QD11 358 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 AbrQ5SSL4 859 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Scgb1c1Q7M742 95 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Prpf38bQ80SY5 542 aaKnown RBP16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Usp20Q8C6M1 916 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Acap1Q8K2H4 740 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Nectin3Q9JLB9 549 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 MthfrQ9WU20 654 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Sall1Q9ER74 1322 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 4931408C20RikE9PWP9 1381 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 SmoktcrA2KF29 484 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 RxrbP28704 520 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 FauP35545 74 aaKnown RBP16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Snx27Q3UHD6 539 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tmem45aQ60774 273 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Hnrnpa0Q9CX86 305 aaKnown RBP16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Arl10Q9QXJ4 243 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Vmn2r86G5E8Y4 848 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm3099J3QPA5 205 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Sh3pxd2aO89032 1124 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Anxa2P07356 339 aaKnown RBP16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Psmd3P14685 530 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ccnb2P30276 398 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ago1Q8CJG1 857 aaKnown RBP16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Nudt13Q8JZU0 352 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Glod5Q9D8I3 148 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 A0A286YDU1 74 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm281D3Z1Y0 860 aa16.48■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm3636E9Q5P1 227 aa16.48■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms