Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Gm25239-201ENSMUST00000174915 86 ntBASIC34.15■■■■□ 3.06
Ripk1Q60855 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ripk1Q60855 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ripk1Q60855 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ripk1Q60855 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ripk1Q60855 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Ripk1Q60855 Gm15042-201ENSMUST00000120212 883 ntBASIC30.36■■■□□ 2.45
Ripk1Q60855 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ripk1Q60855 Gm15045-201ENSMUST00000117359 883 ntBASIC29.77■■■□□ 2.36
Ripk1Q60855 Psd-208ENSMUST00000224556 2034 ntBASIC29.69■■■□□ 2.34
Ripk1Q60855 Gm24109-201ENSMUST00000175489 103 ntBASIC29.37■■■□□ 2.29
Ripk1Q60855 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ripk1Q60855 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ripk1Q60855 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ripk1Q60855 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.2■■■□□ 2.26
Ripk1Q60855 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ripk1Q60855 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ripk1Q60855 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ripk1Q60855 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ripk1Q60855 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ripk1Q60855 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ripk1Q60855 Gm23366-201ENSMUST00000175022 89 ntBASIC28.61■■■□□ 2.17
Ripk1Q60855 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ripk1Q60855 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ripk1Q60855 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ripk1Q60855 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Ripk1Q60855 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ripk1Q60855 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ripk1Q60855 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.45■■■□□ 2.14
Ripk1Q60855 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ripk1Q60855 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ripk1Q60855 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ripk1Q60855 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.14■■■□□ 2.1
Ripk1Q60855 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ripk1Q60855 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ripk1Q60855 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Ripk1Q60855 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.85■■■□□ 2.05
Ripk1Q60855 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ripk1Q60855 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ripk1Q60855 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.65■■■□□ 2.02
Ripk1Q60855 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Ripk1Q60855 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Ripk1Q60855 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ripk1Q60855 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.36■■□□□ 1.97
Ripk1Q60855 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.35■■□□□ 1.97
Ripk1Q60855 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ripk1Q60855 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ripk1Q60855 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ripk1Q60855 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Ripk1Q60855 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.1■■□□□ 1.93
Ripk1Q60855 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ripk1Q60855 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ripk1Q60855 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ripk1Q60855 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ripk1Q60855 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ripk1Q60855 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ripk1Q60855 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ripk1Q60855 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ripk1Q60855 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.81■■□□□ 1.88
Ripk1Q60855 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ripk1Q60855 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.78■■□□□ 1.88
Ripk1Q60855 Gm25238-201ENSMUST00000174914 89 ntBASIC26.78■■□□□ 1.88
Ripk1Q60855 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.73■■□□□ 1.87
Ripk1Q60855 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.73■■□□□ 1.87
Ripk1Q60855 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Ripk1Q60855 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ripk1Q60855 Gm27325-201ENSMUST00000175467 74 ntBASIC26.7■■□□□ 1.86
Ripk1Q60855 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ripk1Q60855 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.66■■□□□ 1.86
Ripk1Q60855 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.66■■□□□ 1.86
Ripk1Q60855 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ripk1Q60855 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Ripk1Q60855 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.5■■□□□ 1.83
Ripk1Q60855 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ripk1Q60855 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ripk1Q60855 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.42■■□□□ 1.82
Ripk1Q60855 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ripk1Q60855 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ripk1Q60855 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
Ripk1Q60855 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ripk1Q60855 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ripk1Q60855 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ripk1Q60855 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ripk1Q60855 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ripk1Q60855 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ripk1Q60855 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ripk1Q60855 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Ripk1Q60855 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Ripk1Q60855 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ripk1Q60855 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.13■■□□□ 1.77
Ripk1Q60855 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ripk1Q60855 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.12■■□□□ 1.77
Ripk1Q60855 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.1■■□□□ 1.77
Ripk1Q60855 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ripk1Q60855 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ripk1Q60855 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ripk1Q60855 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ripk1Q60855 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ripk1Q60855 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ripk1Q60855 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms