Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Gm25239-201ENSMUST00000174915 86 ntBASIC31.49■■■□□ 2.63
DhfrP00375 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
DhfrP00375 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
DhfrP00375 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
DhfrP00375 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
DhfrP00375 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
DhfrP00375 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
DhfrP00375 Psd-208ENSMUST00000224556 2034 ntBASIC28.19■■■□□ 2.1
DhfrP00375 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
DhfrP00375 Gm15042-201ENSMUST00000120212 883 ntBASIC27.87■■■□□ 2.05
DhfrP00375 Gm15045-201ENSMUST00000117359 883 ntBASIC27.2■■□□□ 1.94
DhfrP00375 Gm24109-201ENSMUST00000175489 103 ntBASIC27.08■■□□□ 1.93
DhfrP00375 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DhfrP00375 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DhfrP00375 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
DhfrP00375 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
DhfrP00375 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DhfrP00375 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
DhfrP00375 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
DhfrP00375 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DhfrP00375 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DhfrP00375 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
DhfrP00375 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
DhfrP00375 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
DhfrP00375 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
DhfrP00375 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
DhfrP00375 Gm23366-201ENSMUST00000175022 89 ntBASIC26.45■■□□□ 1.82
DhfrP00375 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
DhfrP00375 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DhfrP00375 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.26■■□□□ 1.79
DhfrP00375 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DhfrP00375 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
DhfrP00375 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DhfrP00375 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.09■■□□□ 1.77
DhfrP00375 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
DhfrP00375 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DhfrP00375 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
DhfrP00375 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DhfrP00375 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DhfrP00375 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
DhfrP00375 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DhfrP00375 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
DhfrP00375 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
DhfrP00375 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DhfrP00375 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
DhfrP00375 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.65■■□□□ 1.7
DhfrP00375 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.63■■□□□ 1.69
DhfrP00375 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.55■■□□□ 1.68
DhfrP00375 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
DhfrP00375 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
DhfrP00375 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.35■■□□□ 1.65
DhfrP00375 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
DhfrP00375 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.26■■□□□ 1.63
DhfrP00375 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DhfrP00375 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
DhfrP00375 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
DhfrP00375 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DhfrP00375 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DhfrP00375 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.03■■□□□ 1.6
DhfrP00375 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
DhfrP00375 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.97■■□□□ 1.59
DhfrP00375 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.58
DhfrP00375 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DhfrP00375 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DhfrP00375 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
DhfrP00375 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DhfrP00375 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
DhfrP00375 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
DhfrP00375 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
DhfrP00375 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
DhfrP00375 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.85■■□□□ 1.57
DhfrP00375 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
DhfrP00375 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
DhfrP00375 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.74■■□□□ 1.55
DhfrP00375 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DhfrP00375 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.71■■□□□ 1.55
DhfrP00375 Gm25238-201ENSMUST00000174914 89 ntBASIC24.7■■□□□ 1.54
DhfrP00375 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
DhfrP00375 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DhfrP00375 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
DhfrP00375 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DhfrP00375 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DhfrP00375 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.58■■□□□ 1.52
DhfrP00375 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
DhfrP00375 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DhfrP00375 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
DhfrP00375 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.54■■□□□ 1.52
DhfrP00375 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DhfrP00375 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DhfrP00375 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DhfrP00375 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
DhfrP00375 Gm27325-201ENSMUST00000175467 74 ntBASIC24.45■■□□□ 1.5
DhfrP00375 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
DhfrP00375 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DhfrP00375 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.42■■□□□ 1.5
DhfrP00375 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
DhfrP00375 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DhfrP00375 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DhfrP00375 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.3■■□□□ 1.48
DhfrP00375 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms