Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Smim17A0A504 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
Smim17A0A504 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Smim17A0A504 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Smim17A0A504 Psd-208ENSMUST00000224556 2034 ntBASIC29.67■■■□□ 2.34
Smim17A0A504 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Smim17A0A504 Gm25239-201ENSMUST00000174915 86 ntBASIC28.76■■■□□ 2.19
Smim17A0A504 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Smim17A0A504 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Smim17A0A504 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Smim17A0A504 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Smim17A0A504 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Smim17A0A504 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Smim17A0A504 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Smim17A0A504 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Smim17A0A504 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Smim17A0A504 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Smim17A0A504 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Smim17A0A504 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Smim17A0A504 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Smim17A0A504 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Smim17A0A504 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Smim17A0A504 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Smim17A0A504 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.99■■□□□ 1.91
Smim17A0A504 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.97■■□□□ 1.91
Smim17A0A504 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Smim17A0A504 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Smim17A0A504 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Smim17A0A504 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.89■■□□□ 1.9
Smim17A0A504 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Smim17A0A504 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.82■■□□□ 1.88
Smim17A0A504 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Smim17A0A504 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Smim17A0A504 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Smim17A0A504 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
Smim17A0A504 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Smim17A0A504 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.31■■□□□ 1.8
Smim17A0A504 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smim17A0A504 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Smim17A0A504 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Smim17A0A504 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smim17A0A504 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smim17A0A504 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.09■■□□□ 1.77
Smim17A0A504 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smim17A0A504 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Smim17A0A504 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smim17A0A504 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.97■■□□□ 1.75
Smim17A0A504 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
Smim17A0A504 Gm15042-201ENSMUST00000120212 883 ntBASIC25.88■■□□□ 1.73
Smim17A0A504 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smim17A0A504 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Smim17A0A504 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Smim17A0A504 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Smim17A0A504 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Smim17A0A504 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Smim17A0A504 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Smim17A0A504 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Smim17A0A504 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Smim17A0A504 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
Smim17A0A504 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.64■■□□□ 1.69
Smim17A0A504 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Smim17A0A504 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Smim17A0A504 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Smim17A0A504 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.57■■□□□ 1.68
Smim17A0A504 Gm15045-201ENSMUST00000117359 883 ntBASIC25.54■■□□□ 1.68
Smim17A0A504 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Smim17A0A504 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Smim17A0A504 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smim17A0A504 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.47■■□□□ 1.67
Smim17A0A504 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.47■■□□□ 1.67
Smim17A0A504 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Smim17A0A504 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Smim17A0A504 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Smim17A0A504 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.38■■□□□ 1.65
Smim17A0A504 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smim17A0A504 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Smim17A0A504 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smim17A0A504 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smim17A0A504 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.25■■□□□ 1.63
Smim17A0A504 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smim17A0A504 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smim17A0A504 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smim17A0A504 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smim17A0A504 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smim17A0A504 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Smim17A0A504 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Smim17A0A504 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Smim17A0A504 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Smim17A0A504 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Smim17A0A504 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smim17A0A504 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smim17A0A504 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Smim17A0A504 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Smim17A0A504 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Smim17A0A504 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Smim17A0A504 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Smim17A0A504 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smim17A0A504 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.75■■□□□ 1.55
Smim17A0A504 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Smim17A0A504 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms