RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 DUR3P33413 735 aa6.4□□□□□ -1.38
snR56snR56 RSC4Q02206 625 aa6.4□□□□□ -1.38
snR56snR56 MEC3Q02574 474 aa6.4□□□□□ -1.38
snR56snR56 MSH4P40965 878 aaPredicted RBP6.39□□□□□ -1.39
snR56snR56 EAR1Q03212 550 aa6.39□□□□□ -1.39
snR56snR56 GIP4P39732 760 aa6.38□□□□□ -1.39
snR56snR56 SSY1Q03770 852 aa6.38□□□□□ -1.39
snR56snR56 TRE1Q08919 783 aa6.37□□□□□ -1.39
snR56snR56 ALG6Q12001 544 aaKnown RBP6.37□□□□□ -1.39
snR56snR56 LPX1Q12405 387 aaKnown RBP6.37□□□□□ -1.39
snR56snR56 PEX7P39108 375 aa6.36□□□□□ -1.39
snR56snR56 UTP22P53254 1237 aaPredicted RBP6.36□□□□□ -1.39
snR56snR56 YVC1Q12324 675 aa6.36□□□□□ -1.39
snR56snR56 PRP6P19735 899 aaPredicted RBP6.35□□□□□ -1.39
snR56snR56 MSH6Q03834 1242 aa6.35□□□□□ -1.39
snR56snR56 REI1P38344 393 aaPredicted RBP6.34□□□□□ -1.39
snR56snR56 FLR1P38124 548 aa6.33□□□□□ -1.4
snR56snR56 NFS1P25374 497 aa6.32□□□□□ -1.4
snR56snR56 PRO1P32264 428 aa6.32□□□□□ -1.4
snR56snR56 ECM2P38241 364 aaKnown RBP6.32□□□□□ -1.4
snR56snR56 UFD2P54860 961 aa6.32□□□□□ -1.4
snR56snR56 SMY2P32909 740 aaKnown RBP6.31□□□□□ -1.4
snR56snR56 SAP155P43612 1002 aa6.31□□□□□ -1.4
snR56snR56 YGR045CP53229 120 aa6.31□□□□□ -1.4
snR56snR56 HDA2Q06629 674 aa6.31□□□□□ -1.4
snR56snR56 ELA1P53861 379 aaPredicted RBP6.29□□□□□ -1.4
snR56snR56 AIM3P38266 947 aaKnown RBP6.28□□□□□ -1.4
snR56snR56 GLO3P38682 493 aaKnown RBP6.28□□□□□ -1.4
snR56snR56 QDR1P40475 563 aa6.28□□□□□ -1.4
snR56snR56 YDL177CQ12257 170 aa6.28□□□□□ -1.4
snR56snR56 NNK1P36003 928 aa6.27□□□□□ -1.41
snR56snR56 ARL1P38116 183 aaKnown RBP6.27□□□□□ -1.41
snR56snR56 PTC7P38797 343 aa6.27□□□□□ -1.41
snR56snR56 FLP1P03870 423 aa6.26□□□□□ -1.41
snR56snR56 TY1A-LR4P0C2I8 440 aaKnown RBP6.26□□□□□ -1.41
snR56snR56 TY1A-DR6P0CX70 440 aa6.26□□□□□ -1.41
snR56snR56 TY1A-ER1P0CX71 440 aa6.26□□□□□ -1.41
snR56snR56 TY1A-LR2P0CX72 440 aa6.26□□□□□ -1.41
snR56snR56 TY1A-PLP0CX73 440 aa6.26□□□□□ -1.41
snR56snR56 TY1A-JR1P0CX74 440 aa6.26□□□□□ -1.41
snR56snR56 TY1A-LR3P0CX75 440 aa6.26□□□□□ -1.41
snR56snR56 TY1A-ML2P0CX76 440 aa6.26□□□□□ -1.41
snR56snR56 MRPL22P53881 309 aa6.26□□□□□ -1.41
snR56snR56 TY1A-GR1Q12085 440 aa6.26□□□□□ -1.41
snR56snR56 MNL2Q12205 849 aa6.26□□□□□ -1.41
snR56snR56 TY1A-PR3Q6Q5H1 440 aaKnown RBP6.26□□□□□ -1.41
snR56snR56 TY1A-OLQ92392 440 aaKnown RBP6.26□□□□□ -1.41
snR56snR56 NUT1P53114 1132 aa6.25□□□□□ -1.41
snR56snR56 RIM8P53179 542 aa6.25□□□□□ -1.41
snR56snR56 YAF9P53930 226 aa6.25□□□□□ -1.41
snR56snR56 YNL011CP53980 444 aa6.25□□□□□ -1.41
snR56snR56 PMT7Q06644 662 aa6.25□□□□□ -1.41
snR56snR56 KAR5Q04746 504 aa6.24□□□□□ -1.41
snR56snR56 BSC2Q05611 235 aa6.24□□□□□ -1.41
snR56snR56 SUB2Q07478 446 aaKnown RBP6.24□□□□□ -1.41
snR56snR56 AVO1Q08236 1176 aa6.24□□□□□ -1.41
snR56snR56 GTS1P40956 396 aa6.23□□□□□ -1.41
snR56snR56 PUS7Q08647 676 aaKnown RBP6.23□□□□□ -1.41
snR56snR56 ACF4P47129 309 aa6.22□□□□□ -1.41
snR56snR56 ATG1P53104 897 aa6.22□□□□□ -1.41
snR56snR56 ETP1P38748 585 aaKnown RBP6.21□□□□□ -1.42
snR56snR56 CDC55Q00362 526 aa6.21□□□□□ -1.42
snR56snR56 TRS120Q04183 1289 aa6.21□□□□□ -1.42
snR56snR56 SOD2P00447 233 aa6.2□□□□□ -1.42
snR56snR56 EXO5P38289 585 aa6.2□□□□□ -1.42
snR56snR56 TPP1Q03796 238 aa6.2□□□□□ -1.42
snR56snR56 MCM5P29496 775 aaKnown RBP6.19□□□□□ -1.42
snR56snR56 SLS1P42900 643 aa6.19□□□□□ -1.42
snR56snR56 GIS1Q03833 894 aa6.19□□□□□ -1.42
snR56snR56 SAM35P14693 329 aa6.18□□□□□ -1.42
snR56snR56 RVS167P39743 482 aaKnown RBP6.18□□□□□ -1.42
snR56snR56 TOD6P34219 525 aa6.17□□□□□ -1.42
snR56snR56 YPL277CQ08989 487 aa6.17□□□□□ -1.42
snR56snR56 YKL077WP36081 392 aa6.16□□□□□ -1.42
snR56snR56 NEM1P38757 446 aa6.16□□□□□ -1.42
snR56snR56 INP54Q08227 384 aaKnown RBP6.16□□□□□ -1.42
snR56snR56 MON1P53129 644 aa6.15□□□□□ -1.42
snR56snR56 RPS13P05756 151 aaKnown RBP6.14□□□□□ -1.43
snR56snR56 RET1P22276 1149 aaKnown RBP6.14□□□□□ -1.43
snR56snR56 YHL012WP38709 493 aa6.14□□□□□ -1.43
snR56snR56 YAR028WP39548 234 aa6.14□□□□□ -1.43
snR56snR56 YLR257WQ06146 321 aaKnown RBP6.14□□□□□ -1.43
snR56snR56 TRL1P09880 827 aaKnown RBP6.13□□□□□ -1.43
snR56snR56 NMD3P38861 518 aaKnown RBP6.13□□□□□ -1.43
snR56snR56 GSF2Q04697 403 aaKnown RBP6.13□□□□□ -1.43
snR56snR56 MDL2P33311 773 aa6.12□□□□□ -1.43
snR56snR56 SHU2P38957 223 aa6.12□□□□□ -1.43
snR56snR56 SNO2P53823 222 aa6.12□□□□□ -1.43
snR56snR56 NOG1Q02892 647 aaKnown RBP6.11□□□□□ -1.43
snR56snR56 CLU1Q03690 1277 aaKnown RBP6.11□□□□□ -1.43
snR56snR56 FOL2P51601 243 aaKnown RBP6.1□□□□□ -1.43
snR56snR56 GPI13Q07830 1017 aa6.1□□□□□ -1.43
snR56snR56 ABZ1P37254 787 aaPredicted RBP6.09□□□□□ -1.43
snR56snR56 MTR4P47047 1073 aaKnown RBP6.09□□□□□ -1.43
snR56snR56 UTP5Q04177 643 aaKnown RBP6.09□□□□□ -1.43
snR56snR56 RSA3Q05942 220 aaKnown RBP6.09□□□□□ -1.43
snR56snR56 PRE10P21242 288 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
snR56snR56 RPL34AP87262 121 aaPredicted RBP6.08□□□□□ -1.44
snR56snR56 NOC3Q07896 663 aaPredicted RBP6.08□□□□□ -1.44
snR56snR56 HRK1Q08732 759 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 68.9 ms