RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	SPN1	Q06505	410 aa	Predicted RBP	4.87	□□□□□ -1.63
TRM44	YPL030W	TFB4	Q12004	338 aa		4.87	□□□□□ -1.63
TRM44	YPL030W	RPO31	P04051	1460 aa		4.87	□□□□□ -1.63
TRM44	YPL030W	KAR1	P11927	433 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	HSP104	P31539	908 aa	Known RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	KAR9	P32526	644 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	PEP12	P32854	288 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	HSP78	P33416	811 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	CCL1	P37366	393 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	PBY1	P38254	753 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	SLX1	P38324	304 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	TIF5	P38431	405 aa	Known RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	OSH3	P38713	996 aa	Known RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	RTS1	P38903	757 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
TRM44	YPL030W	MEF2	P39677	819 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	PES4	P39684	611 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	PEX21	P50091	288 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	NUP84	P52891	726 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	ORM1	P53224	222 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	ARP5	P53946	755 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	VTI1	Q04338	217 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	ATG38	Q05789	226 aa	Known RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	RSA3	Q05942	220 aa	Known RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	YDL129W	Q07555	291 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	ABP140	Q08641	628 aa	Known RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	BMT6	Q12291	365 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	NOT5	Q12514	560 aa	Predicted RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	TAF2	P23255	1407 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	TY1B-DR4	Q07793	1604 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	YML133C	Q03099	1374 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	YLL067C	Q07888	1374 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	YLL066C	Q99208	1374 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	RPP0	P05317	312 aa	Known RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	KEX1	P09620	729 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	ACP1	P32463	125 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	RPN12	P32496	274 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	RPN2	P32565	945 aa	Known RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	RPC34	P32910	317 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	SLD2	P34252	453 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	UBP14	P38237	781 aa	Known RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	COP1	P53622	1201 aa	Known RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	ULP1	Q02724	621 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	MSH6	Q03834	1242 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	VPS20	Q04272	221 aa		4.86	□□□□□ -1.63
TRM44	YPL030W	YLR326W	Q06170	240 aa	Known RBP	4.86	□□□□□ -1.63
TRM44	YPL030W	HSL1	P34244	1518 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	SSC1	P0CS90	654 aa	Known RBP	4.85	□□□□□ -1.63
TRM44	YPL030W	PMS1	P14242	873 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	DPB3	P27344	201 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	NFU1	P32860	256 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	PET112	P33893	541 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	MIC60	P36112	540 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	PSY4	P38193	441 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	CIC1	P38779	376 aa	Known RBP	4.85	□□□□□ -1.63
TRM44	YPL030W	YER034W	P40022	185 aa	Known RBP	4.85	□□□□□ -1.63
TRM44	YPL030W	ARB1	P40024	610 aa	Known RBP	4.85	□□□□□ -1.63
TRM44	YPL030W	RTT106	P40161	455 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	PEX14	P53112	341 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	RTC4	P53850	401 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	HPC2	Q01448	625 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	HAP5	Q02516	242 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	ARV1	Q06541	321 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	ARR2	Q06597	130 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	CDC45	Q08032	650 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	BUD7	Q08754	746 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	YPL277C	Q08989	487 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	RTC5	Q12108	567 aa	Known RBP	4.85	□□□□□ -1.63
TRM44	YPL030W	SMC6	Q12749	1114 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	PDR10	P51533	1564 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	DRS2	P39524	1355 aa		4.85	□□□□□ -1.63
TRM44	YPL030W	RPS3	P05750	240 aa	Known RBP	4.84	□□□□□ -1.63
TRM44	YPL030W	HNM1	P19807	563 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	VPS1	P21576	704 aa	Known RBP	4.84	□□□□□ -1.63
TRM44	YPL030W	MRPL25	P23369	157 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	MEF1	P25039	761 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	RME1	P32338	300 aa	Known RBP	4.84	□□□□□ -1.63
TRM44	YPL030W	CSE1	P33307	960 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	ATG19	P35193	415 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	LHS1	P36016	881 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	SRL3	P36167	246 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	GDT1	P38301	280 aa	Predicted RBP	4.84	□□□□□ -1.63
TRM44	YPL030W	ILV3	P39522	585 aa	Known RBP	4.84	□□□□□ -1.63
TRM44	YPL030W	TMN3	P40071	706 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	ALG2	P43636	503 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	IML2	P47031	731 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	SNX4	P47057	423 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	RAT1	Q02792	1006 aa	Known RBP	4.84	□□□□□ -1.63
TRM44	YPL030W	PML39	Q03760	334 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	SPO71	Q03868	1245 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	LCB5	Q06147	687 aa	Known RBP	4.84	□□□□□ -1.63
TRM44	YPL030W	DBP9	Q06218	594 aa	Known RBP	4.84	□□□□□ -1.63
TRM44	YPL030W	YDL073W	Q07454	984 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	ISA1	Q07821	250 aa	Predicted RBP	4.84	□□□□□ -1.63
TRM44	YPL030W	RTP1	Q12751	981 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	YIL002W-A	Q3E7Z5	69 aa		4.84	□□□□□ -1.63
TRM44	YPL030W	TEF1	P02994	458 aa	Known RBP	4.83	□□□□□ -1.64
TRM44	YPL030W	LEU1	P07264	779 aa	Known RBP	4.83	□□□□□ -1.64
TRM44	YPL030W	RPB2	P08518	1224 aa	Known RBP	4.83	□□□□□ -1.64
TRM44	YPL030W	MCM3	P24279	971 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms