RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W RNR2P09938 399 aaKnown RBP4.14□□□□□ -1.75
ABP140YOR239W NAT1P12945 854 aaKnown RBP4.14□□□□□ -1.75
ABP140YOR239W TUP1P16649 713 aa4.14□□□□□ -1.75
ABP140YOR239W GAL11P19659 1081 aa4.14□□□□□ -1.75
ABP140YOR239W ECM4P36156 370 aa4.14□□□□□ -1.75
ABP140YOR239W YSW1P38280 609 aa4.14□□□□□ -1.75
ABP140YOR239W YLF2P38746 405 aa4.14□□□□□ -1.75
ABP140YOR239W NCS2P53923 493 aaPredicted RBP4.14□□□□□ -1.75
ABP140YOR239W FAR8Q05040 523 aa4.14□□□□□ -1.75
ABP140YOR239W STE23Q06010 1027 aa4.14□□□□□ -1.75
ABP140YOR239W MRD1Q06106 887 aaKnown RBP4.14□□□□□ -1.75
ABP140YOR239W BRR1Q99177 341 aaPredicted RBP4.14□□□□□ -1.75
ABP140YOR239W CPS1P27614 576 aa4.13□□□□□ -1.75
ABP140YOR239W PDB1P32473 366 aaKnown RBP4.13□□□□□ -1.75
ABP140YOR239W PET112P33893 541 aa4.13□□□□□ -1.75
ABP140YOR239W YKR018CP36114 725 aa4.13□□□□□ -1.75
ABP140YOR239W LIN1P38852 340 aaPredicted RBP4.13□□□□□ -1.75
ABP140YOR239W VPS8P39702 1274 aa4.13□□□□□ -1.75
ABP140YOR239W CCT5P40413 562 aaKnown RBP4.13□□□□□ -1.75
ABP140YOR239W GCN20P43535 752 aaKnown RBP4.13□□□□□ -1.75
ABP140YOR239W SET2P46995 733 aaKnown RBP4.13□□□□□ -1.75
ABP140YOR239W VPS53P47061 822 aa4.13□□□□□ -1.75
ABP140YOR239W GYP7P48365 746 aa4.13□□□□□ -1.75
ABP140YOR239W ATF2P53296 535 aa4.13□□□□□ -1.75
ABP140YOR239W DSL1P53847 754 aa4.13□□□□□ -1.75
ABP140YOR239W BNI4P53858 892 aa4.13□□□□□ -1.75
ABP140YOR239W SEC5P89102 971 aa4.13□□□□□ -1.75
ABP140YOR239W SRC1Q03707 834 aa4.13□□□□□ -1.75
ABP140YOR239W PML39Q03760 334 aa4.13□□□□□ -1.75
ABP140YOR239W RBA50Q04418 439 aa4.13□□□□□ -1.75
ABP140YOR239W YDR344CQ05510 147 aa4.13□□□□□ -1.75
ABP140YOR239W DPL1Q05567 589 aa4.13□□□□□ -1.75
ABP140YOR239W MMR1Q06324 491 aa4.13□□□□□ -1.75
ABP140YOR239W YPR172WQ06608 200 aa4.13□□□□□ -1.75
ABP140YOR239W DNL4Q08387 944 aaPredicted RBP4.13□□□□□ -1.75
ABP140YOR239W MET7Q08645 548 aa4.13□□□□□ -1.75
ABP140YOR239W RUD3Q12234 484 aaKnown RBP4.13□□□□□ -1.75
ABP140YOR239W BNR1P40450 1375 aa4.13□□□□□ -1.75
ABP140YOR239W SWI1P09547 1314 aa4.13□□□□□ -1.75
ABP140YOR239W PDR1P12383 1068 aa4.13□□□□□ -1.75
ABP140YOR239W GCD2P12754 651 aaPredicted RBP4.13□□□□□ -1.75
ABP140YOR239W PRE10P21242 288 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
ABP140YOR239W HIR2P32480 875 aa4.13□□□□□ -1.75
ABP140YOR239W RPN2P32565 945 aaKnown RBP4.13□□□□□ -1.75
ABP140YOR239W SEC6P32844 805 aa4.13□□□□□ -1.75
ABP140YOR239W VPS35P34110 944 aa4.13□□□□□ -1.75
ABP140YOR239W PTH2P34222 208 aa4.13□□□□□ -1.75
ABP140YOR239W EFM2P38347 419 aa4.13□□□□□ -1.75
ABP140YOR239W OSH3P38713 996 aaKnown RBP4.13□□□□□ -1.75
ABP140YOR239W CCT4P39078 528 aaKnown RBP4.13□□□□□ -1.75
ABP140YOR239W NUP60P39705 539 aa4.13□□□□□ -1.75
ABP140YOR239W MRX12P47084 519 aa4.13□□□□□ -1.75
ABP140YOR239W BET4Q00618 327 aa4.13□□□□□ -1.75
ABP140YOR239W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
ABP140YOR239W MFM1Q02783 413 aa4.13□□□□□ -1.75
ABP140YOR239W PKH1Q03407 766 aa4.13□□□□□ -1.75
ABP140YOR239W ERB1Q04660 807 aaKnown RBP4.13□□□□□ -1.75
ABP140YOR239W SPN1Q06505 410 aaPredicted RBP4.13□□□□□ -1.75
ABP140YOR239W PDR11P40550 1411 aa4.13□□□□□ -1.75
ABP140YOR239W TAL1P15019 335 aaKnown RBP4.12□□□□□ -1.75
ABP140YOR239W DAL7P21826 554 aa4.12□□□□□ -1.75
ABP140YOR239W UBP1P25037 809 aa4.12□□□□□ -1.75
ABP140YOR239W KCC4P25389 1037 aa4.12□□□□□ -1.75
ABP140YOR239W DPB3P27344 201 aa4.12□□□□□ -1.75
ABP140YOR239W ASF1P32447 279 aa4.12□□□□□ -1.75
ABP140YOR239W RAD5P32849 1169 aaPredicted RBP4.12□□□□□ -1.75
ABP140YOR239W HSM3P38348 480 aa4.12□□□□□ -1.75
ABP140YOR239W SPC72P39723 622 aa4.12□□□□□ -1.75
ABP140YOR239W SYG1P40528 902 aa4.12□□□□□ -1.75
ABP140YOR239W AIM21P40563 679 aa4.12□□□□□ -1.75
ABP140YOR239W MSN5P52918 1224 aa4.12□□□□□ -1.75
ABP140YOR239W SHE10P53075 577 aa4.12□□□□□ -1.75
ABP140YOR239W MAL13P53338 473 aa4.12□□□□□ -1.75
ABP140YOR239W RIA1P53893 1110 aa4.12□□□□□ -1.75
ABP140YOR239W NIS1P53939 407 aa4.12□□□□□ -1.75
ABP140YOR239W VTC3Q02725 835 aa4.12□□□□□ -1.75
ABP140YOR239W HEH2Q03281 663 aa4.12□□□□□ -1.75
ABP140YOR239W CEF1Q03654 590 aaPredicted RBP4.12□□□□□ -1.75
ABP140YOR239W YML108WQ03759 105 aa4.12□□□□□ -1.75
ABP140YOR239W YKU80Q04437 629 aa4.12□□□□□ -1.75
ABP140YOR239W NKP2Q06162 153 aa4.12□□□□□ -1.75
ABP140YOR239W SFH1Q06168 426 aa4.12□□□□□ -1.75
ABP140YOR239W SDH5Q08230 162 aa4.12□□□□□ -1.75
ABP140YOR239W MPC54Q08550 464 aa4.12□□□□□ -1.75
ABP140YOR239W YOR223WQ12015 292 aa4.12□□□□□ -1.75
ABP140YOR239W TY1B-HO13535 1793 aa4.12□□□□□ -1.75
ABP140YOR239W TY1B-DR5P0C2I2 1755 aa4.12□□□□□ -1.75
ABP140YOR239W TY1B-DR6P0C2I3 1755 aa4.12□□□□□ -1.75
ABP140YOR239W TY1B-LR2P0C2I5 1755 aa4.12□□□□□ -1.75
ABP140YOR239W TY1B-LR3P0C2I6 1755 aaKnown RBP4.12□□□□□ -1.75
ABP140YOR239W TY1B-PR1P0C2I9 1755 aaKnown RBP4.12□□□□□ -1.75
ABP140YOR239W TY1B-PR2P0C2J0 1756 aa4.12□□□□□ -1.75
ABP140YOR239W TY1B-PR3P0C2J1 1755 aaKnown RBP4.12□□□□□ -1.75
ABP140YOR239W TY1B-JR1P47098 1755 aa4.12□□□□□ -1.75
ABP140YOR239W TY1B-ML2Q03434 1755 aaKnown RBP4.12□□□□□ -1.75
ABP140YOR239W TY1B-ER1Q03612 1755 aa4.12□□□□□ -1.75
ABP140YOR239W TY1B-ML1Q04711 1755 aaKnown RBP4.12□□□□□ -1.75
ABP140YOR239W TY1B-GR2Q12269 1755 aa4.12□□□□□ -1.75
ABP140YOR239W TY1B-OLQ12273 1755 aa4.12□□□□□ -1.75
ABP140YOR239W TY1B-PLQ12414 1755 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms