RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W ADE16P54113 591 aaKnown RBP2.37□□□□□ -2.03
HER1YOR227W HAP4P14064 554 aa2.37□□□□□ -2.03
HER1YOR227W MRC1P25588 1096 aa2.37□□□□□ -2.03
HER1YOR227W MNR2P35724 969 aa2.37□□□□□ -2.03
HER1YOR227W YBR197CP38306 217 aa2.37□□□□□ -2.03
HER1YOR227W CRP1P38845 465 aaKnown RBP2.37□□□□□ -2.03
HER1YOR227W RSP5P39940 809 aaKnown RBP2.37□□□□□ -2.03
HER1YOR227W UBP10P53874 792 aaPredicted RBP2.37□□□□□ -2.03
HER1YOR227W YNL115CP53925 644 aa2.37□□□□□ -2.03
HER1YOR227W WRS1Q12109 432 aaKnown RBP2.37□□□□□ -2.03
HER1YOR227W LEU2P04173 364 aaPredicted RBP2.36□□□□□ -2.03
HER1YOR227W PHO8P11491 566 aa2.36□□□□□ -2.03
HER1YOR227W TAF13P11747 167 aa2.36□□□□□ -2.03
HER1YOR227W SPE2P21182 396 aa2.36□□□□□ -2.03
HER1YOR227W UBP1P25037 809 aa2.36□□□□□ -2.03
HER1YOR227W VPS27P40343 622 aaKnown RBP2.36□□□□□ -2.03
HER1YOR227W MAD1P40957 749 aa2.36□□□□□ -2.03
HER1YOR227W TYW3P53177 273 aa2.36□□□□□ -2.03
HER1YOR227W UTP22P53254 1237 aaPredicted RBP2.36□□□□□ -2.03
HER1YOR227W ESC2Q06340 456 aa2.36□□□□□ -2.03
HER1YOR227W GAS4Q08271 471 aa2.36□□□□□ -2.03
HER1YOR227W RPT2P40327 437 aaKnown RBP2.36□□□□□ -2.03
HER1YOR227W PFD1P46988 109 aa2.36□□□□□ -2.03
HER1YOR227W TUM1Q08686 304 aaKnown RBP2.36□□□□□ -2.03
HER1YOR227W FLC1Q08967 793 aa2.36□□□□□ -2.03
HER1YOR227W CDC34P14682 295 aa2.35□□□□□ -2.03
HER1YOR227W PDI1P17967 522 aaKnown RBP2.35□□□□□ -2.03
HER1YOR227W MKK2P32491 506 aa2.35□□□□□ -2.03
HER1YOR227W GRX7P38068 203 aa2.35□□□□□ -2.03
HER1YOR227W RRP8P38961 392 aaKnown RBP2.35□□□□□ -2.03
HER1YOR227W VID27P40157 782 aa2.35□□□□□ -2.03
HER1YOR227W MSH4P40965 878 aaPredicted RBP2.35□□□□□ -2.03
HER1YOR227W GPP1P41277 250 aaKnown RBP2.35□□□□□ -2.03
HER1YOR227W GNP1P48813 663 aa2.35□□□□□ -2.03
HER1YOR227W UTP13Q05946 817 aaKnown RBP2.35□□□□□ -2.03
HER1YOR227W ATG13Q06628 738 aa2.35□□□□□ -2.03
HER1YOR227W OPI10Q08202 246 aa2.35□□□□□ -2.03
HER1YOR227W NTG2Q08214 380 aa2.35□□□□□ -2.03
HER1YOR227W TFB4Q12004 338 aa2.35□□□□□ -2.03
HER1YOR227W SLX4Q12098 748 aa2.35□□□□□ -2.03
HER1YOR227W TCB1Q12466 1186 aa2.35□□□□□ -2.03
HER1YOR227W TMA17Q12513 150 aa2.35□□□□□ -2.03
HER1YOR227W CAN1P04817 590 aa2.35□□□□□ -2.03
HER1YOR227W SRM1P21827 482 aa2.35□□□□□ -2.03
HER1YOR227W SOH1P38633 127 aa2.35□□□□□ -2.03
HER1YOR227W BDP1P46678 594 aa2.35□□□□□ -2.03
HER1YOR227W BNA1P47096 177 aa2.35□□□□□ -2.03
HER1YOR227W COG6P53959 839 aa2.35□□□□□ -2.03
HER1YOR227W YNL034WP53963 612 aa2.35□□□□□ -2.03
HER1YOR227W YNL018CP53976 612 aa2.35□□□□□ -2.03
HER1YOR227W EEB1Q02891 456 aa2.35□□□□□ -2.03
HER1YOR227W CEF1Q03654 590 aaPredicted RBP2.35□□□□□ -2.03
HER1YOR227W GRX3Q03835 250 aa2.35□□□□□ -2.03
HER1YOR227W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
HER1YOR227W ERP4Q12450 207 aa2.35□□□□□ -2.03
HER1YOR227W ECM29P38737 1868 aa2.35□□□□□ -2.03
HER1YOR227W PRI2P20457 528 aa2.35□□□□□ -2.03
HER1YOR227W UGA4P32837 571 aa2.35□□□□□ -2.03
HER1YOR227W YBL086CP38177 466 aa2.35□□□□□ -2.03
HER1YOR227W DAN4P47179 1161 aa2.35□□□□□ -2.03
HER1YOR227W SND1Q04007 877 aa2.35□□□□□ -2.03
HER1YOR227W YLR278CQ05854 1341 aa2.35□□□□□ -2.03
HER1YOR227W SEC2P17065 759 aa2.34□□□□□ -2.03
HER1YOR227W CLN2P20438 545 aa2.34□□□□□ -2.03
HER1YOR227W NPR1P22211 790 aa2.34□□□□□ -2.03
HER1YOR227W NGR1P32831 672 aaKnown RBP2.34□□□□□ -2.03
HER1YOR227W RTA1P53047 317 aa2.34□□□□□ -2.03
HER1YOR227W PUS6P53294 404 aa2.34□□□□□ -2.03
HER1YOR227W UTP14Q04500 899 aaKnown RBP2.34□□□□□ -2.03
HER1YOR227W RRI2Q12348 645 aa2.34□□□□□ -2.03
HER1YOR227W VPS5Q92331 675 aa2.34□□□□□ -2.03
HER1YOR227W ADR1P07248 1323 aa2.34□□□□□ -2.03
HER1YOR227W CCP1P00431 361 aa2.34□□□□□ -2.03
HER1YOR227W KEX2P13134 814 aa2.34□□□□□ -2.03
HER1YOR227W BET3P36149 193 aa2.34□□□□□ -2.03
HER1YOR227W MAL31P38156 614 aa2.34□□□□□ -2.03
HER1YOR227W NOC2P39744 710 aaKnown RBP2.34□□□□□ -2.03
HER1YOR227W CHZ1P40019 153 aaPredicted RBP2.34□□□□□ -2.03
HER1YOR227W PIC2P40035 300 aa2.34□□□□□ -2.03
HER1YOR227W ATG16Q03818 150 aa2.34□□□□□ -2.03
HER1YOR227W YLR001CQ07895 862 aa2.34□□□□□ -2.03
HER1YOR227W TY1A-DR4O74302 440 aa2.34□□□□□ -2.04
HER1YOR227W TY1A-HP0C2I4 478 aaKnown RBP2.34□□□□□ -2.04
HER1YOR227W TY1A-AP0CX57 440 aa2.34□□□□□ -2.04
HER1YOR227W TY1A-PR1P0CX58 440 aa2.34□□□□□ -2.04
HER1YOR227W TY1A-ORP0CX59 440 aa2.34□□□□□ -2.04
HER1YOR227W TY1A-PR2P0CX60 440 aa2.34□□□□□ -2.04
HER1YOR227W TY1A-DR5P0CX65 440 aa2.34□□□□□ -2.04
HER1YOR227W TY1A-ER2P0CX66 440 aa2.34□□□□□ -2.04
HER1YOR227W TY1A-GR3P0CX67 440 aa2.34□□□□□ -2.04
HER1YOR227W TY1A-LR1P0CX68 440 aa2.34□□□□□ -2.04
HER1YOR227W TY1A-MR2P0CX69 440 aa2.34□□□□□ -2.04
HER1YOR227W APA1P16550 321 aaKnown RBP2.34□□□□□ -2.04
HER1YOR227W MSH2P25847 964 aa2.34□□□□□ -2.04
HER1YOR227W MRF1P30775 413 aaPredicted RBP2.34□□□□□ -2.04
HER1YOR227W PET112P33893 541 aa2.34□□□□□ -2.04
HER1YOR227W VPS35P34110 944 aa2.34□□□□□ -2.04
HER1YOR227W MNN4P36044 1178 aa2.34□□□□□ -2.04
HER1YOR227W TY1A-JR2P47099 440 aa2.34□□□□□ -2.04
HER1YOR227W CDC55Q00362 526 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms