RNA–Protein interactions for RNA: YLR146C

SPE4, Transcript of Spermine synthase, yeastyeast

Gene SPE4, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE4YLR146C PCH2P38126 564 aa8.4□□□□□ -1.06
SPE4YLR146C MAL33P38157 468 aa8.4□□□□□ -1.06
SPE4YLR146C YSW1P38280 609 aa8.4□□□□□ -1.06
SPE4YLR146C YHL017WP38745 532 aa8.4□□□□□ -1.06
SPE4YLR146C FYV10P40492 516 aa8.4□□□□□ -1.06
SPE4YLR146C HUL4P40985 892 aa8.4□□□□□ -1.06
SPE4YLR146C EIS1Q05050 843 aaKnown RBP8.4□□□□□ -1.06
SPE4YLR146C STE23Q06010 1027 aa8.4□□□□□ -1.06
SPE4YLR146C CSC1Q06538 782 aa8.4□□□□□ -1.06
SPE4YLR146C ATG23Q06671 453 aa8.4□□□□□ -1.06
SPE4YLR146C APL4Q12028 832 aa8.4□□□□□ -1.06
SPE4YLR146C SRP40P32583 406 aaPredicted RBP8.39□□□□□ -1.07
SPE4YLR146C YKT6P36015 200 aaKnown RBP8.39□□□□□ -1.07
SPE4YLR146C BUD16P39988 312 aa8.39□□□□□ -1.07
SPE4YLR146C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
SPE4YLR146C CAF130P53280 1122 aaPredicted RBP8.39□□□□□ -1.07
SPE4YLR146C BRE1Q07457 700 aaKnown RBP8.39□□□□□ -1.07
SPE4YLR146C BUD20Q08004 166 aaPredicted RBP8.39□□□□□ -1.07
SPE4YLR146C CTI6Q08923 506 aa8.39□□□□□ -1.07
SPE4YLR146C SMC6Q12749 1114 aa8.39□□□□□ -1.07
SPE4YLR146C PRP16P15938 1071 aaPredicted RBP8.38□□□□□ -1.07
SPE4YLR146C PHO13P19881 312 aa8.38□□□□□ -1.07
SPE4YLR146C ECM21P38167 1117 aaKnown RBP8.38□□□□□ -1.07
SPE4YLR146C BOI2P39969 1040 aa8.38□□□□□ -1.07
SPE4YLR146C YDR338CQ05497 695 aa8.38□□□□□ -1.07
SPE4YLR146C PRT1P06103 763 aaKnown RBP8.37□□□□□ -1.07
SPE4YLR146C DIT2P21595 489 aa8.37□□□□□ -1.07
SPE4YLR146C CDC15P27636 974 aa8.37□□□□□ -1.07
SPE4YLR146C DPH5P32469 300 aaPredicted RBP8.37□□□□□ -1.07
SPE4YLR146C PXL1P36166 706 aa8.37□□□□□ -1.07
SPE4YLR146C OLA1P38219 394 aaKnown RBP8.37□□□□□ -1.07
SPE4YLR146C YBR287WP38355 427 aa8.37□□□□□ -1.07
SPE4YLR146C PXA1P41909 870 aa8.37□□□□□ -1.07
SPE4YLR146C YNR021WP53723 404 aaKnown RBP8.37□□□□□ -1.07
SPE4YLR146C OSH2Q12451 1283 aa8.37□□□□□ -1.07
SPE4YLR146C COQ4O13525 335 aa8.36□□□□□ -1.07
SPE4YLR146C PMR1P13586 950 aa8.36□□□□□ -1.07
SPE4YLR146C HEL1P36113 551 aa8.36□□□□□ -1.07
SPE4YLR146C PSY4P38193 441 aa8.36□□□□□ -1.07
SPE4YLR146C CCC2P38995 1004 aa8.36□□□□□ -1.07
SPE4YLR146C NOC2P39744 710 aaKnown RBP8.36□□□□□ -1.07
SPE4YLR146C ILM1P47155 203 aa8.36□□□□□ -1.07
SPE4YLR146C PRP43P53131 767 aaKnown RBP8.36□□□□□ -1.07
SPE4YLR146C NCS2P53923 493 aaPredicted RBP8.36□□□□□ -1.07
SPE4YLR146C SPO19Q03029 223 aa8.36□□□□□ -1.07
SPE4YLR146C VPS38Q05919 439 aa8.36□□□□□ -1.07
SPE4YLR146C SFH1Q06168 426 aa8.36□□□□□ -1.07
SPE4YLR146C AOS1Q06624 347 aa8.36□□□□□ -1.07
SPE4YLR146C TFB4Q12004 338 aa8.36□□□□□ -1.07
SPE4YLR146C YOR223WQ12015 292 aa8.36□□□□□ -1.07
SPE4YLR146C TY4A-HQ6Q5P6 413 aa8.36□□□□□ -1.07
SPE4YLR146C RPL22AP05749 121 aaKnown RBP8.35□□□□□ -1.07
SPE4YLR146C ECM32P32644 1121 aaKnown RBP8.35□□□□□ -1.07
SPE4YLR146C AIR1P40507 360 aaKnown RBP8.35□□□□□ -1.07
SPE4YLR146C YJR079WP47126 109 aa8.35□□□□□ -1.07
SPE4YLR146C DNM1P54861 757 aa8.35□□□□□ -1.07
SPE4YLR146C LCB5Q06147 687 aaKnown RBP8.35□□□□□ -1.07
SPE4YLR146C CMS1Q07897 291 aaKnown RBP8.35□□□□□ -1.07
SPE4YLR146C ABP140Q08641 628 aaKnown RBP8.35□□□□□ -1.07
SPE4YLR146C NCB2Q92317 146 aa8.35□□□□□ -1.07
SPE4YLR146C PDR18P53756 1333 aa8.34□□□□□ -1.07
SPE4YLR146C PUP2P32379 260 aa8.34□□□□□ -1.07
SPE4YLR146C YME2P32843 850 aa8.34□□□□□ -1.07
SPE4YLR146C CNS1P33313 385 aa8.34□□□□□ -1.07
SPE4YLR146C STO1P34160 861 aaKnown RBP8.34□□□□□ -1.07
SPE4YLR146C TPS3P38426 1054 aaKnown RBP8.34□□□□□ -1.07
SPE4YLR146C SEC26P41810 973 aaKnown RBP8.34□□□□□ -1.07
SPE4YLR146C PEX21P50091 288 aa8.34□□□□□ -1.07
SPE4YLR146C VMS1Q04311 632 aaKnown RBP8.34□□□□□ -1.07
SPE4YLR146C GAS4Q08271 471 aa8.34□□□□□ -1.07
SPE4YLR146C SEC23P15303 768 aaKnown RBP8.33□□□□□ -1.08
SPE4YLR146C RGR1P19263 1082 aa8.33□□□□□ -1.08
SPE4YLR146C GAL11P19659 1081 aa8.33□□□□□ -1.08
SPE4YLR146C PRE10P21242 288 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
SPE4YLR146C CDC60P26637 1090 aaKnown RBP8.33□□□□□ -1.08
SPE4YLR146C GAR1P28007 205 aaKnown RBP8.33□□□□□ -1.08
SPE4YLR146C CDC11P32458 415 aa8.33□□□□□ -1.08
SPE4YLR146C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
SPE4YLR146C IAH1P41734 238 aa8.33□□□□□ -1.08
SPE4YLR146C TRS85P46944 698 aa8.33□□□□□ -1.08
SPE4YLR146C YGR122WP53272 402 aa8.33□□□□□ -1.08
SPE4YLR146C MRPS35P53292 345 aa8.33□□□□□ -1.08
SPE4YLR146C BOP3P53958 396 aa8.33□□□□□ -1.08
SPE4YLR146C STE20Q03497 939 aaKnown RBP8.33□□□□□ -1.08
SPE4YLR146C ORM2Q06144 216 aa8.33□□□□□ -1.08
SPE4YLR146C YSH1Q06224 779 aaPredicted RBP8.33□□□□□ -1.08
SPE4YLR146C NOP6Q07623 225 aaKnown RBP8.33□□□□□ -1.08
SPE4YLR146C YOL057WQ08225 711 aa8.33□□□□□ -1.08
SPE4YLR146C NUR1Q12066 484 aa8.33□□□□□ -1.08
SPE4YLR146C ERG12P07277 443 aa8.32□□□□□ -1.08
SPE4YLR146C MATALPHA2P0CY08 210 aa8.32□□□□□ -1.08
SPE4YLR146C HMLALPHA2P0CY09 210 aa8.32□□□□□ -1.08
SPE4YLR146C MRP7P12687 371 aa8.32□□□□□ -1.08
SPE4YLR146C PGI1P12709 554 aaKnown RBP8.32□□□□□ -1.08
SPE4YLR146C KRS1P15180 591 aaKnown RBP8.32□□□□□ -1.08
SPE4YLR146C CDC10P25342 322 aaKnown RBP8.32□□□□□ -1.08
SPE4YLR146C CPS1P27614 576 aa8.32□□□□□ -1.08
SPE4YLR146C PDB1P32473 366 aaKnown RBP8.32□□□□□ -1.08
SPE4YLR146C RAD5P32849 1169 aaPredicted RBP8.32□□□□□ -1.08
SPE4YLR146C SEC9P40357 651 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms