RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C PNP1Q05788 311 aa5.22□□□□□ -1.57
SDO1YLR022C URN1Q06525 465 aaKnown RBP5.22□□□□□ -1.57
SDO1YLR022C LDH1P38139 375 aa5.21□□□□□ -1.58
SDO1YLR022C TED1P40533 473 aa5.21□□□□□ -1.58
SDO1YLR022C HAP1P0CE41 1502 aa5.21□□□□□ -1.58
SDO1YLR022C TY1B-NL2Q99337 1749 aaKnown RBP5.2□□□□□ -1.58
SDO1YLR022C PGM1P33401 570 aaKnown RBP5.2□□□□□ -1.58
SDO1YLR022C GIP1P38229 639 aa5.2□□□□□ -1.58
SDO1YLR022C YER156CP40093 338 aaKnown RBP5.2□□□□□ -1.58
SDO1YLR022C YJL181WP46987 611 aa5.2□□□□□ -1.58
SDO1YLR022C ARI1P53111 347 aaKnown RBP5.2□□□□□ -1.58
SDO1YLR022C APC11Q12157 165 aa5.2□□□□□ -1.58
SDO1YLR022C SSA1P10591 642 aaKnown RBP5.18□□□□□ -1.58
SDO1YLR022C COQ2P32378 372 aa5.18□□□□□ -1.58
SDO1YLR022C RRN6P32786 894 aa5.18□□□□□ -1.58
SDO1YLR022C ELM1P32801 640 aa5.18□□□□□ -1.58
SDO1YLR022C KTR2P33550 425 aa5.18□□□□□ -1.58
SDO1YLR022C ISW1P38144 1129 aa5.18□□□□□ -1.58
SDO1YLR022C SOK2P53438 785 aaPredicted RBP5.18□□□□□ -1.58
SDO1YLR022C LSO1Q3E827 93 aa5.18□□□□□ -1.58
SDO1YLR022C TRP3P00937 484 aa5.17□□□□□ -1.58
SDO1YLR022C MSN1P22148 382 aa5.17□□□□□ -1.58
SDO1YLR022C SFA1P32771 386 aa5.17□□□□□ -1.58
SDO1YLR022C BOI1P38041 980 aaKnown RBP5.17□□□□□ -1.58
SDO1YLR022C YBT1P32386 1661 aa5.16□□□□□ -1.58
SDO1YLR022C YKR073CP36153 106 aa5.16□□□□□ -1.58
SDO1YLR022C BOL3P39724 118 aa5.16□□□□□ -1.58
SDO1YLR022C GIP2P40036 548 aa5.16□□□□□ -1.58
SDO1YLR022C PPT1P53043 513 aa5.16□□□□□ -1.58
SDO1YLR022C TY4B-PA0A0B7P3V8 1104 aa5.15□□□□□ -1.59
SDO1YLR022C HXT8P40886 569 aa5.15□□□□□ -1.59
SDO1YLR022C SLP1Q12232 587 aa5.15□□□□□ -1.59
SDO1YLR022C YLR122CQ12312 125 aa5.15□□□□□ -1.59
SDO1YLR022C TY4A-HQ6Q5P6 413 aa5.15□□□□□ -1.59
SDO1YLR022C FUR4P05316 633 aaKnown RBP5.14□□□□□ -1.59
SDO1YLR022C KAE1P36132 386 aa5.14□□□□□ -1.59
SDO1YLR022C AKR1P39010 764 aa5.14□□□□□ -1.59
SDO1YLR022C YIL165CP40446 119 aa5.14□□□□□ -1.59
SDO1YLR022C RPL34AP87262 121 aaPredicted RBP5.14□□□□□ -1.59
SDO1YLR022C TY1A-NL1Q12391 440 aaKnown RBP5.14□□□□□ -1.59
SDO1YLR022C SEC7P11075 2009 aaKnown RBP5.13□□□□□ -1.59
SDO1YLR022C RPB10P22139 70 aa5.13□□□□□ -1.59
SDO1YLR022C RSC6P25632 483 aa5.13□□□□□ -1.59
SDO1YLR022C NAM7P30771 971 aaKnown RBP5.13□□□□□ -1.59
SDO1YLR022C YBR287WP38355 427 aa5.13□□□□□ -1.59
SDO1YLR022C RGD2P43556 714 aa5.13□□□□□ -1.59
SDO1YLR022C MED7Q08278 222 aa5.13□□□□□ -1.59
SDO1YLR022C NUP188P52593 1655 aaKnown RBP5.12□□□□□ -1.59
SDO1YLR022C LIP5P32875 414 aa5.12□□□□□ -1.59
SDO1YLR022C TOS1P38288 455 aa5.12□□□□□ -1.59
SDO1YLR022C FIR1P40020 876 aa5.12□□□□□ -1.59
SDO1YLR022C NTA1P40354 457 aa5.12□□□□□ -1.59
SDO1YLR022C SUT1P53032 299 aaKnown RBP5.12□□□□□ -1.59
SDO1YLR022C YGR130CP53278 816 aa5.12□□□□□ -1.59
SDO1YLR022C EMG1Q06287 252 aaKnown RBP5.12□□□□□ -1.59
SDO1YLR022C RSC2Q06488 889 aa5.12□□□□□ -1.59
SDO1YLR022C IML1P47170 1584 aa5.12□□□□□ -1.59
SDO1YLR022C SMC1P32908 1225 aa5.1□□□□□ -1.59
SDO1YLR022C KAR5Q04746 504 aa5.1□□□□□ -1.59
SDO1YLR022C VMR1P38735 1592 aa5.09□□□□□ -1.59
SDO1YLR022C BCK1Q01389 1478 aa5.09□□□□□ -1.59
SDO1YLR022C CHS2P14180 963 aa5.09□□□□□ -1.59
SDO1YLR022C GEF1P37020 779 aa5.09□□□□□ -1.59
SDO1YLR022C SAF1P38352 637 aa5.09□□□□□ -1.59
SDO1YLR022C AIM46P38885 310 aa5.09□□□□□ -1.59
SDO1YLR022C RAD55P38953 406 aa5.09□□□□□ -1.59
SDO1YLR022C INP51P40559 946 aaKnown RBP5.09□□□□□ -1.59
SDO1YLR022C ATG1P53104 897 aa5.09□□□□□ -1.59
SDO1YLR022C PDR11P40550 1411 aa5.08□□□□□ -1.6
SDO1YLR022C PAN5P38787 379 aa5.08□□□□□ -1.6
SDO1YLR022C DSE4P53753 1117 aa5.08□□□□□ -1.6
SDO1YLR022C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
SDO1YLR022C REC8Q12188 680 aa5.08□□□□□ -1.6
SDO1YLR022C TIF6Q12522 245 aaKnown RBP5.08□□□□□ -1.6
SDO1YLR022C CDC3P32457 520 aaKnown RBP5.07□□□□□ -1.6
SDO1YLR022C IRS4P36115 615 aaKnown RBP5.07□□□□□ -1.6
SDO1YLR022C TFA2P36145 328 aa5.07□□□□□ -1.6
SDO1YLR022C GLO3P38682 493 aaKnown RBP5.07□□□□□ -1.6
SDO1YLR022C IPL1P38991 367 aa5.07□□□□□ -1.6
SDO1YLR022C PSY2P40164 858 aa5.07□□□□□ -1.6
SDO1YLR022C QDR1P40475 563 aa5.07□□□□□ -1.6
SDO1YLR022C CTH1P47976 325 aa5.07□□□□□ -1.6
SDO1YLR022C ALD3P54114 506 aa5.07□□□□□ -1.6
SDO1YLR022C FUS1P11710 512 aa5.06□□□□□ -1.6
SDO1YLR022C PUB1P32588 453 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
SDO1YLR022C UBP5P39944 805 aa5.06□□□□□ -1.6
SDO1YLR022C ACF4P47129 309 aa5.06□□□□□ -1.6
SDO1YLR022C UFD2P54860 961 aa5.06□□□□□ -1.6
SDO1YLR022C TAF7Q05021 590 aa5.06□□□□□ -1.6
SDO1YLR022C BIO5P53744 561 aaKnown RBP5.05□□□□□ -1.6
SDO1YLR022C GIS1Q03833 894 aa5.05□□□□□ -1.6
SDO1YLR022C SOG2Q08817 791 aa5.05□□□□□ -1.6
SDO1YLR022C ENT1Q12518 454 aa5.05□□□□□ -1.6
SDO1YLR022C CYC7P00045 113 aa5.04□□□□□ -1.6
SDO1YLR022C TRL1P09880 827 aaKnown RBP5.04□□□□□ -1.6
SDO1YLR022C GUP1P53154 560 aa5.04□□□□□ -1.6
SDO1YLR022C IMH1Q06704 911 aaKnown RBP5.04□□□□□ -1.6
SDO1YLR022C BRE4Q07660 1125 aa5.04□□□□□ -1.6
SDO1YLR022C LEM3P42838 414 aa5.03□□□□□ -1.6
SDO1YLR022C RSC4Q02206 625 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms