RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT3	YKL146W	UBP10	P53874	792 aa	Predicted RBP	5.9	□□□□□ -1.47
AVT3	YKL146W	HCA4	P20448	770 aa	Known RBP	5.89	□□□□□ -1.47
AVT3	YKL146W	MAK31	P23059	88 aa		5.89	□□□□□ -1.47
AVT3	YKL146W	ROX1	P25042	368 aa		5.89	□□□□□ -1.47
AVT3	YKL146W	AKR1	P39010	764 aa		5.89	□□□□□ -1.47
AVT3	YKL146W	SNF7	P39929	240 aa	Known RBP	5.89	□□□□□ -1.47
AVT3	YKL146W	UTP7	P40055	554 aa	Known RBP	5.89	□□□□□ -1.47
AVT3	YKL146W	YGR117C	P53270	476 aa		5.89	□□□□□ -1.47
AVT3	YKL146W	YLR407W	Q06070	228 aa		5.89	□□□□□ -1.47
AVT3	YKL146W	PRE8	P23639	250 aa		5.89	□□□□□ -1.47
AVT3	YKL146W	ADP1	P25371	1049 aa		5.89	□□□□□ -1.47
AVT3	YKL146W	PRO3	P32263	286 aa	Known RBP	5.89	□□□□□ -1.47
AVT3	YKL146W	MAL31	P38156	614 aa		5.89	□□□□□ -1.47
AVT3	YKL146W	RFC5	P38251	354 aa		5.89	□□□□□ -1.47
AVT3	YKL146W	YPL150W	Q12152	901 aa		5.89	□□□□□ -1.47
AVT3	YKL146W	THS1	P04801	734 aa	Known RBP	5.88	□□□□□ -1.47
AVT3	YKL146W	CBP1	P07252	654 aa		5.88	□□□□□ -1.47
AVT3	YKL146W	SRM1	P21827	482 aa		5.88	□□□□□ -1.47
AVT3	YKL146W	RTG2	P32608	588 aa	Known RBP	5.88	□□□□□ -1.47
AVT3	YKL146W	PAM1	P37304	830 aa	Known RBP	5.88	□□□□□ -1.47
AVT3	YKL146W	YBL028C	P38202	106 aa		5.88	□□□□□ -1.47
AVT3	YKL146W	CSM2	P40465	213 aa		5.88	□□□□□ -1.47
AVT3	YKL146W	HAP5	Q02516	242 aa		5.88	□□□□□ -1.47
AVT3	YKL146W	YDL124W	Q07551	312 aa	Known RBP	5.88	□□□□□ -1.47
AVT3	YKL146W	HSP82	P02829	709 aa	Known RBP	5.87	□□□□□ -1.47
AVT3	YKL146W	PMA1	P05030	918 aa	Known RBP	5.87	□□□□□ -1.47
AVT3	YKL146W	DIT2	P21595	489 aa		5.87	□□□□□ -1.47
AVT3	YKL146W	BMH2	P34730	273 aa	Known RBP	5.87	□□□□□ -1.47
AVT3	YKL146W	RPN10	P38886	268 aa	Known RBP	5.87	□□□□□ -1.47
AVT3	YKL146W	HYR1	P40581	163 aa	Known RBP	5.87	□□□□□ -1.47
AVT3	YKL146W	RPT6	Q01939	405 aa	Known RBP	5.87	□□□□□ -1.47
AVT3	YKL146W	MYO5	Q04439	1219 aa	Known RBP	5.87	□□□□□ -1.47
AVT3	YKL146W	PEX19	Q07418	342 aa		5.87	□□□□□ -1.47
AVT3	YKL146W	ACE2	P21192	770 aa		5.87	□□□□□ -1.47
AVT3	YKL146W	CBP3	P21560	335 aa		5.87	□□□□□ -1.47
AVT3	YKL146W	SWI4	P25302	1093 aa	Known RBP	5.87	□□□□□ -1.47
AVT3	YKL146W	RPL8B	P29453	256 aa	Known RBP	5.87	□□□□□ -1.47
AVT3	YKL146W	CDC27	P38042	758 aa		5.87	□□□□□ -1.47
AVT3	YKL146W	ARL1	P38116	183 aa	Known RBP	5.87	□□□□□ -1.47
AVT3	YKL146W	MAL33	P38157	468 aa		5.87	□□□□□ -1.47
AVT3	YKL146W	CST26	P38226	397 aa		5.87	□□□□□ -1.47
AVT3	YKL146W	NIT1	P40447	199 aa		5.87	□□□□□ -1.47
AVT3	YKL146W	EMP47	P43555	445 aa		5.87	□□□□□ -1.47
AVT3	YKL146W	YOR111W	Q99210	232 aa		5.87	□□□□□ -1.47
AVT3	YKL146W	YLR278C	Q05854	1341 aa		5.87	□□□□□ -1.47
AVT3	YKL146W	PBS2	P08018	668 aa		5.86	□□□□□ -1.47
AVT3	YKL146W	KEX1	P09620	729 aa		5.86	□□□□□ -1.47
AVT3	YKL146W	RNR3	P21672	869 aa	Known RBP	5.86	□□□□□ -1.47
AVT3	YKL146W	RAD53	P22216	821 aa		5.86	□□□□□ -1.47
AVT3	YKL146W	RDS1	P25611	832 aa		5.86	□□□□□ -1.47
AVT3	YKL146W	CIR1	P42940	261 aa		5.86	□□□□□ -1.47
AVT3	YKL146W	PIL1	P53252	339 aa	Known RBP	5.86	□□□□□ -1.47
AVT3	YKL146W	CLC1	P17891	233 aa		5.86	□□□□□ -1.47
AVT3	YKL146W	KEL1	P38853	1164 aa	Known RBP	5.86	□□□□□ -1.47
AVT3	YKL146W	RSM25	P40496	264 aa		5.86	□□□□□ -1.47
AVT3	YKL146W	FOL1	P53848	824 aa		5.86	□□□□□ -1.47
AVT3	YKL146W	VPS30	Q02948	557 aa		5.86	□□□□□ -1.47
AVT3	YKL146W	GDE1	Q02979	1223 aa		5.86	□□□□□ -1.47
AVT3	YKL146W	SKG3	Q06315	1026 aa		5.86	□□□□□ -1.47
AVT3	YKL146W	CLF1	Q12309	687 aa	Predicted RBP	5.86	□□□□□ -1.47
AVT3	YKL146W	CHS3	P29465	1165 aa		5.85	□□□□□ -1.47
AVT3	YKL146W	RXT2	P38255	430 aa		5.85	□□□□□ -1.47
AVT3	YKL146W	PES4	P39684	611 aa		5.85	□□□□□ -1.47
AVT3	YKL146W	ATG36	P46983	293 aa		5.85	□□□□□ -1.47
AVT3	YKL146W	YDR341C	Q05506	607 aa	Known RBP	5.85	□□□□□ -1.47
AVT3	YKL146W	APC11	Q12157	165 aa		5.85	□□□□□ -1.47
AVT3	YKL146W	MET6	P05694	767 aa	Known RBP	5.84	□□□□□ -1.47
AVT3	YKL146W	NUC1	P08466	329 aa		5.84	□□□□□ -1.47
AVT3	YKL146W	PGI1	P12709	554 aa	Known RBP	5.84	□□□□□ -1.47
AVT3	YKL146W	GAL2	P13181	574 aa		5.84	□□□□□ -1.47
AVT3	YKL146W	MBR1	P23493	339 aa		5.84	□□□□□ -1.47
AVT3	YKL146W	TPS3	P38426	1054 aa	Known RBP	5.84	□□□□□ -1.47
AVT3	YKL146W	CCT5	P40413	562 aa	Known RBP	5.84	□□□□□ -1.47
AVT3	YKL146W	PCI8	P40512	444 aa		5.84	□□□□□ -1.47
AVT3	YKL146W	LAP2	Q10740	671 aa		5.84	□□□□□ -1.47
AVT3	YKL146W	CIT1	P00890	479 aa		5.84	□□□□□ -1.47
AVT3	YKL146W	TUB2	P02557	457 aa	Known RBP	5.84	□□□□□ -1.47
AVT3	YKL146W	CDC6	P09119	513 aa		5.84	□□□□□ -1.47
AVT3	YKL146W	ELM1	P32801	640 aa		5.84	□□□□□ -1.47
AVT3	YKL146W	BRL1	P38770	471 aa		5.84	□□□□□ -1.47
AVT3	YKL146W	TOM71	P38825	639 aa	Known RBP	5.84	□□□□□ -1.47
AVT3	YKL146W	YCK3	P39962	524 aa		5.84	□□□□□ -1.47
AVT3	YKL146W	MDM1	Q01846	1127 aa		5.84	□□□□□ -1.47
AVT3	YKL146W	MYO1	P08964	1928 aa		5.84	□□□□□ -1.48
AVT3	YKL146W	ASF1	P32447	279 aa		5.83	□□□□□ -1.48
AVT3	YKL146W	VPS45	P38932	577 aa		5.83	□□□□□ -1.48
AVT3	YKL146W	RVS167	P39743	482 aa	Known RBP	5.83	□□□□□ -1.48
AVT3	YKL146W	ETT1	Q08421	412 aa	Known RBP	5.83	□□□□□ -1.48
AVT3	YKL146W	DSE3	Q08729	430 aa		5.83	□□□□□ -1.48
AVT3	YKL146W	FRS2	P15625	503 aa	Known RBP	5.83	□□□□□ -1.48
AVT3	YKL146W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
AVT3	YKL146W	RGP1	P16664	663 aa		5.83	□□□□□ -1.48
AVT3	YKL146W	SAM2	P19358	384 aa	Known RBP	5.83	□□□□□ -1.48
AVT3	YKL146W	SRP54	P20424	541 aa	Known RBP	5.83	□□□□□ -1.48
AVT3	YKL146W	VPS1	P21576	704 aa	Known RBP	5.83	□□□□□ -1.48
AVT3	YKL146W	UBP9	P39967	754 aa		5.83	□□□□□ -1.48
AVT3	YKL146W	PEA2	P40091	420 aa		5.83	□□□□□ -1.48
AVT3	YKL146W	FAR11	P53917	953 aa		5.83	□□□□□ -1.48
AVT3	YKL146W	PUS5	Q06244	254 aa		5.83	□□□□□ -1.48
AVT3	YKL146W	DCS2	Q12123	353 aa		5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms