RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C REI1P38344 393 aaPredicted RBP6.92□□□□□ -1.3
CTK2YJL006C OYE3P41816 400 aaPredicted RBP6.92□□□□□ -1.3
CTK2YJL006C ACF4P47129 309 aa6.92□□□□□ -1.3
CTK2YJL006C HSP78P33416 811 aa6.91□□□□□ -1.3
CTK2YJL006C YHL008CP38750 627 aa6.91□□□□□ -1.3
CTK2YJL006C MSH4P40965 878 aaPredicted RBP6.91□□□□□ -1.3
CTK2YJL006C MSH6Q03834 1242 aa6.91□□□□□ -1.3
CTK2YJL006C TRS120Q04183 1289 aa6.91□□□□□ -1.3
CTK2YJL006C BSC2Q05611 235 aa6.9□□□□□ -1.3
CTK2YJL006C GAS1P22146 559 aaKnown RBP6.89□□□□□ -1.31
CTK2YJL006C EAR1Q03212 550 aa6.89□□□□□ -1.31
CTK2YJL006C MNL2Q12205 849 aa6.89□□□□□ -1.31
CTK2YJL006C FLP1P03870 423 aa6.88□□□□□ -1.31
CTK2YJL006C SAP155P43612 1002 aa6.88□□□□□ -1.31
CTK2YJL006C ALT1P52893 592 aa6.88□□□□□ -1.31
CTK2YJL006C PRP43P53131 767 aaKnown RBP6.88□□□□□ -1.31
CTK2YJL006C ADP1P25371 1049 aa6.87□□□□□ -1.31
CTK2YJL006C CDC55Q00362 526 aa6.87□□□□□ -1.31
CTK2YJL006C NUT1P53114 1132 aa6.86□□□□□ -1.31
CTK2YJL006C ELA1P53861 379 aaPredicted RBP6.86□□□□□ -1.31
CTK2YJL006C PMT7Q06644 662 aa6.86□□□□□ -1.31
CTK2YJL006C TRE1Q08919 783 aa6.86□□□□□ -1.31
CTK2YJL006C NFS1P25374 497 aa6.85□□□□□ -1.31
CTK2YJL006C YGR045CP53229 120 aa6.85□□□□□ -1.31
CTK2YJL006C YAF9P53930 226 aa6.85□□□□□ -1.31
CTK2YJL006C SSY1Q03770 852 aa6.85□□□□□ -1.31
CTK2YJL006C YVC1Q12324 675 aa6.85□□□□□ -1.31
CTK2YJL006C MCM5P29496 775 aaKnown RBP6.84□□□□□ -1.31
CTK2YJL006C INP54Q08227 384 aaKnown RBP6.84□□□□□ -1.31
CTK2YJL006C AVO1Q08236 1176 aa6.84□□□□□ -1.31
CTK2YJL006C TRL1P09880 827 aaKnown RBP6.83□□□□□ -1.32
CTK2YJL006C TY1A-LR4P0C2I8 440 aaKnown RBP6.83□□□□□ -1.32
CTK2YJL006C TY1A-DR6P0CX70 440 aa6.83□□□□□ -1.32
CTK2YJL006C TY1A-ER1P0CX71 440 aa6.83□□□□□ -1.32
CTK2YJL006C TY1A-LR2P0CX72 440 aa6.83□□□□□ -1.32
CTK2YJL006C TY1A-PLP0CX73 440 aa6.83□□□□□ -1.32
CTK2YJL006C TY1A-JR1P0CX74 440 aa6.83□□□□□ -1.32
CTK2YJL006C TY1A-LR3P0CX75 440 aa6.83□□□□□ -1.32
CTK2YJL006C TY1A-ML2P0CX76 440 aa6.83□□□□□ -1.32
CTK2YJL006C SMY2P32909 740 aaKnown RBP6.83□□□□□ -1.32
CTK2YJL006C PEX7P39108 375 aa6.83□□□□□ -1.32
CTK2YJL006C TY1A-GR1Q12085 440 aa6.83□□□□□ -1.32
CTK2YJL006C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.83□□□□□ -1.32
CTK2YJL006C TY1A-OLQ92392 440 aaKnown RBP6.83□□□□□ -1.32
CTK2YJL006C PRO1P32264 428 aa6.82□□□□□ -1.32
CTK2YJL006C CDA2Q06703 312 aa6.82□□□□□ -1.32
CTK2YJL006C TSA1P34760 196 aaKnown RBP6.81□□□□□ -1.32
CTK2YJL006C NNK1P36003 928 aa6.81□□□□□ -1.32
CTK2YJL006C ARL1P38116 183 aaKnown RBP6.81□□□□□ -1.32
CTK2YJL006C RVS167P39743 482 aaKnown RBP6.81□□□□□ -1.32
CTK2YJL006C MON1P53129 644 aa6.81□□□□□ -1.32
CTK2YJL006C ORC3P54790 616 aa6.81□□□□□ -1.32
CTK2YJL006C YKL077WP36081 392 aa6.8□□□□□ -1.32
CTK2YJL006C GRS1P38088 690 aaKnown RBP6.8□□□□□ -1.32
CTK2YJL006C YCR015CP25616 317 aa6.79□□□□□ -1.32
CTK2YJL006C YKL222CP35995 705 aa6.79□□□□□ -1.32
CTK2YJL006C LPX1Q12405 387 aaKnown RBP6.79□□□□□ -1.32
CTK2YJL006C PTC7P38797 343 aa6.78□□□□□ -1.32
CTK2YJL006C ESC8Q08119 714 aa6.78□□□□□ -1.32
CTK2YJL006C SSA1P10591 642 aaKnown RBP6.77□□□□□ -1.33
CTK2YJL006C MDJ2P42834 146 aa6.77□□□□□ -1.33
CTK2YJL006C SLS1P42900 643 aa6.77□□□□□ -1.33
CTK2YJL006C GPI13Q07830 1017 aa6.77□□□□□ -1.33
CTK2YJL006C NOC3Q07896 663 aaPredicted RBP6.77□□□□□ -1.33
CTK2YJL006C EXO5P38289 585 aa6.76□□□□□ -1.33
CTK2YJL006C ERP5P38819 212 aa6.76□□□□□ -1.33
CTK2YJL006C PUS7Q08647 676 aaKnown RBP6.76□□□□□ -1.33
CTK2YJL006C CDC3P32457 520 aaKnown RBP6.75□□□□□ -1.33
CTK2YJL006C SHU2P38957 223 aa6.75□□□□□ -1.33
CTK2YJL006C GTS1P40956 396 aa6.75□□□□□ -1.33
CTK2YJL006C FRT1Q99332 602 aa6.75□□□□□ -1.33
CTK2YJL006C THI80P35202 319 aa6.74□□□□□ -1.33
CTK2YJL006C TAF1P46677 1066 aa6.74□□□□□ -1.33
CTK2YJL006C TPP1Q03796 238 aa6.74□□□□□ -1.33
CTK2YJL006C YBL113CQ7M4S9 792 aa6.74□□□□□ -1.33
CTK2YJL006C NEM1P38757 446 aa6.73□□□□□ -1.33
CTK2YJL006C SAM37P50110 327 aa6.73□□□□□ -1.33
CTK2YJL006C NUT2Q06213 157 aa6.73□□□□□ -1.33
CTK2YJL006C YCS4Q06156 1176 aa6.72□□□□□ -1.33
CTK2YJL006C PRP6P19735 899 aaPredicted RBP6.71□□□□□ -1.34
CTK2YJL006C NMD3P38861 518 aaKnown RBP6.71□□□□□ -1.34
CTK2YJL006C YAR028WP39548 234 aa6.71□□□□□ -1.34
CTK2YJL006C GIP4P39732 760 aa6.7□□□□□ -1.34
CTK2YJL006C MTR4P47047 1073 aaKnown RBP6.7□□□□□ -1.34
CTK2YJL006C MRPL22P53881 309 aa6.7□□□□□ -1.34
CTK2YJL006C HAT1Q12341 374 aa6.7□□□□□ -1.34
CTK2YJL006C RET1P22276 1149 aaKnown RBP6.69□□□□□ -1.34
CTK2YJL006C AIM3P38266 947 aaKnown RBP6.69□□□□□ -1.34
CTK2YJL006C NOG1Q02892 647 aaKnown RBP6.69□□□□□ -1.34
CTK2YJL006C YLR257WQ06146 321 aaKnown RBP6.69□□□□□ -1.34
CTK2YJL006C YDL177CQ12257 170 aa6.69□□□□□ -1.34
CTK2YJL006C CIC1P38779 376 aaKnown RBP6.68□□□□□ -1.34
CTK2YJL006C UTP5Q04177 643 aaKnown RBP6.68□□□□□ -1.34
CTK2YJL006C YHL012WP38709 493 aa6.67□□□□□ -1.34
CTK2YJL006C ETP1P38748 585 aaKnown RBP6.67□□□□□ -1.34
CTK2YJL006C MSH3P25336 1018 aa6.66□□□□□ -1.34
CTK2YJL006C HSE1P38753 452 aa6.66□□□□□ -1.34
CTK2YJL006C PEX13P80667 386 aa6.66□□□□□ -1.34
CTK2YJL006C LAP2Q10740 671 aa6.66□□□□□ -1.34
CTK2YJL006C SAM35P14693 329 aa6.65□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms