RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W IRC24P40580 263 aa5.33□□□□□ -1.56
LSB1YGR136W PDS5Q04264 1277 aa5.33□□□□□ -1.56
LSB1YGR136W KAR5Q04746 504 aa5.33□□□□□ -1.56
LSB1YGR136W PSK1P31374 1356 aa5.32□□□□□ -1.56
LSB1YGR136W SRS2P12954 1174 aa5.32□□□□□ -1.56
LSB1YGR136W VAN1P23642 535 aa5.32□□□□□ -1.56
LSB1YGR136W ACS2P52910 683 aaKnown RBP5.32□□□□□ -1.56
LSB1YGR136W HDA3Q06623 655 aa5.32□□□□□ -1.56
LSB1YGR136W MSC6Q08818 692 aaKnown RBP5.32□□□□□ -1.56
LSB1YGR136W RPS24AP0CX31 135 aaKnown RBP5.31□□□□□ -1.56
LSB1YGR136W RPS24BP0CX32 135 aaKnown RBP5.31□□□□□ -1.56
LSB1YGR136W RRN6P32786 894 aa5.31□□□□□ -1.56
LSB1YGR136W PPX1P38698 397 aa5.31□□□□□ -1.56
LSB1YGR136W ERP5P38819 212 aa5.31□□□□□ -1.56
LSB1YGR136W MTR4P47047 1073 aaKnown RBP5.31□□□□□ -1.56
LSB1YGR136W ROM1P53046 1155 aa5.31□□□□□ -1.56
LSB1YGR136W ATG1P53104 897 aa5.31□□□□□ -1.56
LSB1YGR136W ALO1P54783 526 aaKnown RBP5.31□□□□□ -1.56
LSB1YGR136W YMR074CQ04773 145 aa5.31□□□□□ -1.56
LSB1YGR136W TRS33Q99394 268 aa5.31□□□□□ -1.56
LSB1YGR136W RRP5Q05022 1729 aaKnown RBP5.31□□□□□ -1.56
LSB1YGR136W LEU1P07264 779 aaKnown RBP5.3□□□□□ -1.56
LSB1YGR136W MSC7P38694 644 aa5.3□□□□□ -1.56
LSB1YGR136W PNP1Q05788 311 aa5.3□□□□□ -1.56
LSB1YGR136W TY4B-HP0C2J7 1802 aa5.3□□□□□ -1.56
LSB1YGR136W TY4B-JP47024 1803 aa5.3□□□□□ -1.56
LSB1YGR136W ADE6P38972 1358 aaKnown RBP5.29□□□□□ -1.56
LSB1YGR136W RPP1AP05318 106 aaPredicted RBP5.29□□□□□ -1.56
LSB1YGR136W TRL1P09880 827 aaKnown RBP5.29□□□□□ -1.56
LSB1YGR136W UBP1P25037 809 aa5.29□□□□□ -1.56
LSB1YGR136W OMA1P36163 345 aa5.29□□□□□ -1.56
LSB1YGR136W PAM1P37304 830 aaKnown RBP5.29□□□□□ -1.56
LSB1YGR136W TPS3P38426 1054 aaKnown RBP5.29□□□□□ -1.56
LSB1YGR136W ACF4P47129 309 aa5.29□□□□□ -1.56
LSB1YGR136W INP52P50942 1183 aa5.29□□□□□ -1.56
LSB1YGR136W PRP43P53131 767 aaKnown RBP5.29□□□□□ -1.56
LSB1YGR136W SVF1Q05515 481 aa5.29□□□□□ -1.56
LSB1YGR136W YPQ2Q06328 317 aa5.29□□□□□ -1.56
LSB1YGR136W MLP1Q02455 1875 aaKnown RBP5.28□□□□□ -1.56
LSB1YGR136W FUR4P05316 633 aaKnown RBP5.28□□□□□ -1.56
LSB1YGR136W CWH41P53008 833 aa5.28□□□□□ -1.56
LSB1YGR136W PUN1Q06991 263 aa5.28□□□□□ -1.56
LSB1YGR136W SLM3Q12093 417 aa5.28□□□□□ -1.56
LSB1YGR136W AIM9P40053 627 aaKnown RBP5.27□□□□□ -1.57
LSB1YGR136W PDI1P17967 522 aaKnown RBP5.26□□□□□ -1.57
LSB1YGR136W YHL050CP38721 697 aa5.26□□□□□ -1.57
LSB1YGR136W YHR219WP38900 624 aa5.26□□□□□ -1.57
LSB1YGR136W MDJ2P42834 146 aa5.26□□□□□ -1.57
LSB1YGR136W BUD9P53226 547 aa5.26□□□□□ -1.57
LSB1YGR136W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
LSB1YGR136W RGP1P16664 663 aa5.25□□□□□ -1.57
LSB1YGR136W GRS1P38088 690 aaKnown RBP5.25□□□□□ -1.57
LSB1YGR136W DOT5P40553 215 aa5.25□□□□□ -1.57
LSB1YGR136W ALD2P47771 506 aa5.25□□□□□ -1.57
LSB1YGR136W LSO1Q3E827 93 aa5.25□□□□□ -1.57
LSB1YGR136W NHA1Q99271 985 aa5.25□□□□□ -1.57
LSB1YGR136W BOL3P39724 118 aa5.24□□□□□ -1.57
LSB1YGR136W XKS1P42826 600 aa5.24□□□□□ -1.57
LSB1YGR136W RPN11P43588 306 aaKnown RBP5.24□□□□□ -1.57
LSB1YGR136W YJL181WP46987 611 aa5.24□□□□□ -1.57
LSB1YGR136W RRP15Q06511 250 aaPredicted RBP5.24□□□□□ -1.57
LSB1YGR136W YML133CQ03099 1374 aa5.24□□□□□ -1.57
LSB1YGR136W YLL067CQ07888 1374 aa5.24□□□□□ -1.57
LSB1YGR136W YLL066CQ99208 1374 aa5.24□□□□□ -1.57
LSB1YGR136W YRF1-2P40105 1681 aa5.24□□□□□ -1.57
LSB1YGR136W SWI5P08153 709 aa5.23□□□□□ -1.57
LSB1YGR136W YEF3P16521 1044 aaKnown RBP5.23□□□□□ -1.57
LSB1YGR136W NGR1P32831 672 aaKnown RBP5.23□□□□□ -1.57
LSB1YGR136W YKL133CP36066 463 aa5.23□□□□□ -1.57
LSB1YGR136W IOC4Q04213 475 aa5.23□□□□□ -1.57
LSB1YGR136W RSF2P46974 1380 aa5.22□□□□□ -1.57
LSB1YGR136W CYT1P07143 309 aa5.22□□□□□ -1.57
LSB1YGR136W PRS1P32895 427 aaKnown RBP5.22□□□□□ -1.57
LSB1YGR136W NTH2P35172 780 aa5.22□□□□□ -1.57
LSB1YGR136W PGM2P37012 569 aaKnown RBP5.22□□□□□ -1.57
LSB1YGR136W ALG14P38242 237 aa5.22□□□□□ -1.57
LSB1YGR136W MGE1P38523 228 aa5.22□□□□□ -1.57
LSB1YGR136W QDR1P40475 563 aa5.22□□□□□ -1.57
LSB1YGR136W POL32P47110 350 aa5.22□□□□□ -1.57
LSB1YGR136W HEH2Q03281 663 aa5.22□□□□□ -1.57
LSB1YGR136W YRF1-3P0CX14 1859 aa5.22□□□□□ -1.57
LSB1YGR136W YRF1-7P0CX15 1859 aa5.22□□□□□ -1.57
LSB1YGR136W YRF1-6P53819 1859 aa5.22□□□□□ -1.57
LSB1YGR136W URB1P34241 1764 aaKnown RBP5.21□□□□□ -1.57
LSB1YGR136W RPP0P05317 312 aaKnown RBP5.21□□□□□ -1.58
LSB1YGR136W RPS6AP0CX37 236 aaKnown RBP5.21□□□□□ -1.58
LSB1YGR136W RPS6BP0CX38 236 aaPredicted RBP5.21□□□□□ -1.58
LSB1YGR136W MCM1P11746 286 aa5.21□□□□□ -1.58
LSB1YGR136W GRX4P32642 244 aa5.21□□□□□ -1.58
LSB1YGR136W GLO3P38682 493 aaKnown RBP5.21□□□□□ -1.58
LSB1YGR136W YTA6P40328 754 aa5.21□□□□□ -1.58
LSB1YGR136W YNL165WP53891 406 aa5.21□□□□□ -1.58
LSB1YGR136W FOX2Q02207 900 aaKnown RBP5.21□□□□□ -1.58
LSB1YGR136W ROM2P51862 1356 aaKnown RBP5.2□□□□□ -1.58
LSB1YGR136W COBP00163 385 aa5.2□□□□□ -1.58
LSB1YGR136W AI3P03877 415 aa5.2□□□□□ -1.58
LSB1YGR136W TAP42Q04372 366 aa5.2□□□□□ -1.58
LSB1YGR136W NUT2Q06213 157 aa5.2□□□□□ -1.58
LSB1YGR136W HIM1Q06674 414 aa5.2□□□□□ -1.58
LSB1YGR136W SNF2P22082 1703 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms