RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT6	YGR116W	CTM1	P38818	585 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	ADE16	P54113	591 aa	Known RBP	4.05	□□□□□ -1.76
SPT6	YGR116W	MEC3	Q02574	474 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	YOR223W	Q12015	292 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	CKI1	P20485	582 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	BUD14	P27637	709 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	SEC65	P29478	273 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	YNL035C	P53962	389 aa	Known RBP	4.05	□□□□□ -1.76
SPT6	YGR116W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.04	□□□□□ -1.76
SPT6	YGR116W	ERG5	P54781	538 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	YRF1-2	P40105	1681 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	CBP3	P21560	335 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	UBC6	P33296	250 aa	Predicted RBP	4.04	□□□□□ -1.76
SPT6	YGR116W	ISW1	P38144	1129 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	YML119W	Q03208	357 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	ERV41	Q04651	352 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	SFH1	Q06168	426 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	CMS1	Q07897	291 aa	Known RBP	4.04	□□□□□ -1.76
SPT6	YGR116W	SSA2	P10592	639 aa	Known RBP	4.04	□□□□□ -1.76
SPT6	YGR116W	KRS1	P15180	591 aa	Known RBP	4.04	□□□□□ -1.76
SPT6	YGR116W	RAD53	P22216	821 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	BMH1	P29311	267 aa	Known RBP	4.04	□□□□□ -1.76
SPT6	YGR116W	DPH5	P32469	300 aa	Predicted RBP	4.04	□□□□□ -1.76
SPT6	YGR116W	LOS1	P33418	1100 aa	Predicted RBP	4.04	□□□□□ -1.76
SPT6	YGR116W	YKR018C	P36114	725 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	SMC2	P38989	1170 aa	Known RBP	4.04	□□□□□ -1.76
SPT6	YGR116W	YJR008W	P47085	338 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	NCS2	P53923	493 aa	Predicted RBP	4.04	□□□□□ -1.76
SPT6	YGR116W	BOP3	P53958	396 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	DCS2	Q12123	353 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	TFC8	Q12308	588 aa		4.04	□□□□□ -1.76
SPT6	YGR116W	GCD2	P12754	651 aa	Predicted RBP	4.03	□□□□□ -1.76
SPT6	YGR116W	SPP381	P38282	291 aa	Predicted RBP	4.03	□□□□□ -1.76
SPT6	YGR116W	SIP3	P38717	1229 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	SPC24	Q04477	213 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	APL5	Q08951	932 aa	Known RBP	4.03	□□□□□ -1.76
SPT6	YGR116W	LPD1	P09624	499 aa	Known RBP	4.03	□□□□□ -1.76
SPT6	YGR116W	RPG1	P38249	964 aa	Known RBP	4.03	□□□□□ -1.76
SPT6	YGR116W	SMF1	P38925	575 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	ATG3	P40344	310 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	YIL001W	P40560	513 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	GTR1	Q00582	310 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	VPS64	Q03944	604 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	IMH1	Q06704	911 aa	Known RBP	4.03	□□□□□ -1.76
SPT6	YGR116W	SAC3	P46674	1301 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	UBP1	P25037	809 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	SEC8	P32855	1065 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	TDA3	P38758	523 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	LIN1	P38852	340 aa	Predicted RBP	4.03	□□□□□ -1.76
SPT6	YGR116W	HUL5	P53119	910 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	CUE3	P53137	624 aa	Known RBP	4.03	□□□□□ -1.76
SPT6	YGR116W	CSC1	Q06538	782 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	AFT2	Q08957	416 aa		4.03	□□□□□ -1.76
SPT6	YGR116W	MCM4	P30665	933 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	MRX1	P40050	688 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	SHQ1	P40486	507 aa	Predicted RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	EPL1	P43572	832 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	PKH1	Q03407	766 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	STE20	Q03497	939 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	ALE1	Q08548	619 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	SNU66	Q12420	587 aa	Predicted RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	HCA4	P20448	770 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	RPN10	P38886	268 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	YAP5	P40574	245 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	SET2	P46995	733 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	EST2	Q06163	884 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	TSR1	Q07381	788 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	NEW1	Q08972	1196 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	TAF10	Q12030	206 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	URB1	P34241	1764 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	RRP5	Q05022	1729 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	MET1	P36150	593 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	CCC2	P38995	1004 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	ALD2	P47771	506 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	RTC4	P53850	401 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	YNL144C	P53907	740 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	SEC5	P89102	971 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	MFM1	Q02783	413 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	RIO1	Q12196	484 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	SSK22	P25390	1331 aa	Predicted RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	PUP2	P32379	260 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	PDB1	P32473	366 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	BMH2	P34730	273 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	YET1	P35723	206 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	EFM4	P40516	257 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	SNU71	P53207	620 aa	Known RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	SPN1	Q06505	410 aa	Predicted RBP	4.02	□□□□□ -1.77
SPT6	YGR116W	GYP5	Q12344	894 aa		4.02	□□□□□ -1.77
SPT6	YGR116W	TAL1	P15019	335 aa	Known RBP	4.01	□□□□□ -1.77
SPT6	YGR116W	SPO11	P23179	398 aa		4.01	□□□□□ -1.77
SPT6	YGR116W	BCD1	P38772	366 aa		4.01	□□□□□ -1.77
SPT6	YGR116W	ZPR1	P53303	486 aa	Known RBP	4.01	□□□□□ -1.77
SPT6	YGR116W	ZDS2	P54786	942 aa		4.01	□□□□□ -1.77
SPT6	YGR116W	UBX2	Q04228	584 aa		4.01	□□□□□ -1.77
SPT6	YGR116W	VTI1	Q04338	217 aa		4.01	□□□□□ -1.77
SPT6	YGR116W	YSH1	Q06224	779 aa	Predicted RBP	4.01	□□□□□ -1.77
SPT6	YGR116W	ABP140	Q08641	628 aa	Known RBP	4.01	□□□□□ -1.77
SPT6	YGR116W	TOM70	P07213	617 aa	Known RBP	4.01	□□□□□ -1.77
SPT6	YGR116W	ARG1	P22768	420 aa		4.01	□□□□□ -1.77
SPT6	YGR116W	RRP14	P36080	434 aa	Known RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms