RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W YVC1Q12324 675 aa1.39□□□□□ -2.19
CSE1YGL238W TIF6Q12522 245 aaKnown RBP1.39□□□□□ -2.19
CSE1YGL238W SRS2P12954 1174 aa1.38□□□□□ -2.19
CSE1YGL238W PYC2P32327 1180 aaKnown RBP1.38□□□□□ -2.19
CSE1YGL238W TOD6P34219 525 aa1.38□□□□□ -2.19
CSE1YGL238W IRS4P36115 615 aaKnown RBP1.38□□□□□ -2.19
CSE1YGL238W PSY2P40164 858 aa1.38□□□□□ -2.19
CSE1YGL238W MSH4P40965 878 aaPredicted RBP1.38□□□□□ -2.19
CSE1YGL238W NOB1Q08444 459 aaKnown RBP1.38□□□□□ -2.19
CSE1YGL238W MNL2Q12205 849 aa1.38□□□□□ -2.19
CSE1YGL238W PNS1Q12412 539 aa1.38□□□□□ -2.19
CSE1YGL238W TUB2P02557 457 aaKnown RBP1.38□□□□□ -2.19
CSE1YGL238W RAD55P38953 406 aa1.38□□□□□ -2.19
CSE1YGL238W MEC3Q02574 474 aa1.38□□□□□ -2.19
CSE1YGL238W CLU1Q03690 1277 aaKnown RBP1.38□□□□□ -2.19
CSE1YGL238W YIG1Q08956 461 aa1.38□□□□□ -2.19
CSE1YGL238W YPL277CQ08989 487 aa1.38□□□□□ -2.19
CSE1YGL238W LSO1Q3E827 93 aa1.38□□□□□ -2.19
CSE1YGL238W SHM2P37291 469 aaKnown RBP1.37□□□□□ -2.19
CSE1YGL238W PTC7P38797 343 aa1.37□□□□□ -2.19
CSE1YGL238W CMR1Q12510 522 aaKnown RBP1.37□□□□□ -2.19
CSE1YGL238W YLR358CO13565 187 aa1.37□□□□□ -2.19
CSE1YGL238W HTS1P07263 546 aaKnown RBP1.37□□□□□ -2.19
CSE1YGL238W SMC1P32908 1225 aa1.37□□□□□ -2.19
CSE1YGL238W SUT1P53032 299 aaKnown RBP1.37□□□□□ -2.19
CSE1YGL238W RPS13P05756 151 aaKnown RBP1.37□□□□□ -2.19
CSE1YGL238W PRE10P21242 288 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
CSE1YGL238W RPB10P22139 70 aa1.37□□□□□ -2.19
CSE1YGL238W ETP1P38748 585 aaKnown RBP1.37□□□□□ -2.19
CSE1YGL238W CTS1P29029 562 aa1.36□□□□□ -2.19
CSE1YGL238W RRN6P32786 894 aa1.36□□□□□ -2.19
CSE1YGL238W SMY2P32909 740 aaKnown RBP1.36□□□□□ -2.19
CSE1YGL238W REI1P38344 393 aaPredicted RBP1.36□□□□□ -2.19
CSE1YGL238W BOL3P39724 118 aa1.36□□□□□ -2.19
CSE1YGL238W GTS1P40956 396 aa1.36□□□□□ -2.19
CSE1YGL238W UTP22P53254 1237 aaPredicted RBP1.36□□□□□ -2.19
CSE1YGL238W SLI1P53304 468 aa1.36□□□□□ -2.19
CSE1YGL238W RSC4Q02206 625 aa1.36□□□□□ -2.19
CSE1YGL238W YML083CQ04526 418 aa1.36□□□□□ -2.19
CSE1YGL238W ALG6Q12001 544 aaKnown RBP1.36□□□□□ -2.19
CSE1YGL238W NPR1P22211 790 aa1.36□□□□□ -2.19
CSE1YGL238W YGR045CP53229 120 aa1.36□□□□□ -2.19
CSE1YGL238W NNK1P36003 928 aa1.35□□□□□ -2.19
CSE1YGL238W SNO2P53823 222 aa1.35□□□□□ -2.19
CSE1YGL238W SAM35P14693 329 aa1.35□□□□□ -2.19
CSE1YGL238W TY1A-LR4P0C2I8 440 aaKnown RBP1.34□□□□□ -2.19
CSE1YGL238W TY1A-DR6P0CX70 440 aa1.34□□□□□ -2.19
CSE1YGL238W TY1A-ER1P0CX71 440 aa1.34□□□□□ -2.19
CSE1YGL238W TY1A-LR2P0CX72 440 aa1.34□□□□□ -2.19
CSE1YGL238W TY1A-PLP0CX73 440 aa1.34□□□□□ -2.19
CSE1YGL238W TY1A-JR1P0CX74 440 aa1.34□□□□□ -2.19
CSE1YGL238W TY1A-LR3P0CX75 440 aa1.34□□□□□ -2.19
CSE1YGL238W TY1A-ML2P0CX76 440 aa1.34□□□□□ -2.19
CSE1YGL238W ARL1P38116 183 aaKnown RBP1.34□□□□□ -2.19
CSE1YGL238W TAT2P38967 592 aa1.34□□□□□ -2.19
CSE1YGL238W MPT5P39016 859 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
CSE1YGL238W FOL2P51601 243 aaKnown RBP1.34□□□□□ -2.19
CSE1YGL238W ELA1P53861 379 aaPredicted RBP1.34□□□□□ -2.19
CSE1YGL238W YML122CQ03207 126 aa1.34□□□□□ -2.19
CSE1YGL238W YDR132CQ03900 495 aa1.34□□□□□ -2.19
CSE1YGL238W PUS7Q08647 676 aaKnown RBP1.34□□□□□ -2.19
CSE1YGL238W PUS9Q12069 462 aa1.34□□□□□ -2.19
CSE1YGL238W TY1A-GR1Q12085 440 aa1.34□□□□□ -2.19
CSE1YGL238W TY1A-PR3Q6Q5H1 440 aaKnown RBP1.34□□□□□ -2.19
CSE1YGL238W TY1A-OLQ92392 440 aaKnown RBP1.34□□□□□ -2.19
CSE1YGL238W PNP1Q05788 311 aa1.34□□□□□ -2.2
CSE1YGL238W TRM2P33753 639 aa1.33□□□□□ -2.2
CSE1YGL238W AVO1Q08236 1176 aa1.33□□□□□ -2.2
CSE1YGL238W TRL1P09880 827 aaKnown RBP1.33□□□□□ -2.2
CSE1YGL238W HEM13P11353 328 aaKnown RBP1.33□□□□□ -2.2
CSE1YGL238W CPS1P27614 576 aa1.33□□□□□ -2.2
CSE1YGL238W TPP1Q03796 238 aa1.33□□□□□ -2.2
CSE1YGL238W GPI13Q07830 1017 aa1.33□□□□□ -2.2
CSE1YGL238W MDL2P33311 773 aa1.33□□□□□ -2.2
CSE1YGL238W ECM2P38241 364 aaKnown RBP1.33□□□□□ -2.2
CSE1YGL238W EXO5P38289 585 aa1.33□□□□□ -2.2
CSE1YGL238W CDC6P09119 513 aa1.32□□□□□ -2.2
CSE1YGL238W YHL012WP38709 493 aa1.32□□□□□ -2.2
CSE1YGL238W MSE1P48525 536 aa1.32□□□□□ -2.2
CSE1YGL238W RDH54P38086 958 aa1.32□□□□□ -2.2
CSE1YGL238W MEF2P39677 819 aa1.32□□□□□ -2.2
CSE1YGL238W CTF4Q01454 927 aa1.32□□□□□ -2.2
CSE1YGL238W NOG1Q02892 647 aaKnown RBP1.32□□□□□ -2.2
CSE1YGL238W LAM1P38851 1228 aa1.31□□□□□ -2.2
CSE1YGL238W SPT20P50875 604 aa1.31□□□□□ -2.2
CSE1YGL238W ENV11P53246 860 aa1.31□□□□□ -2.2
CSE1YGL238W SGD1Q06132 899 aa1.31□□□□□ -2.2
CSE1YGL238W RQC2Q12532 1038 aaKnown RBP1.31□□□□□ -2.2
CSE1YGL238W FLP1P03870 423 aa1.31□□□□□ -2.2
CSE1YGL238W RET1P22276 1149 aaKnown RBP1.31□□□□□ -2.2
CSE1YGL238W SRO9P25567 434 aaKnown RBP1.31□□□□□ -2.2
CSE1YGL238W BAP2P38084 609 aa1.31□□□□□ -2.2
CSE1YGL238W GCN5Q03330 439 aa1.31□□□□□ -2.2
CSE1YGL238W FUR4P05316 633 aaKnown RBP1.3□□□□□ -2.2
CSE1YGL238W SRM1P21827 482 aa1.3□□□□□ -2.2
CSE1YGL238W AIM26P32858 118 aa1.3□□□□□ -2.2
CSE1YGL238W YKL077WP36081 392 aa1.3□□□□□ -2.2
CSE1YGL238W SLS1P42900 643 aa1.3□□□□□ -2.2
CSE1YGL238W NUT1P53114 1132 aa1.3□□□□□ -2.2
CSE1YGL238W SUN4P53616 420 aa1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms