RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W MAL31P38156 614 aa7.51□□□□□ -1.21
RGD2YFL047W CCC2P38995 1004 aa7.51□□□□□ -1.21
RGD2YFL047W MGA2P40578 1113 aa7.51□□□□□ -1.21
RGD2YFL047W YJL181WP46987 611 aa7.51□□□□□ -1.21
RGD2YFL047W CAF130P53280 1122 aaPredicted RBP7.51□□□□□ -1.21
RGD2YFL047W RPT4P53549 437 aaKnown RBP7.51□□□□□ -1.21
RGD2YFL047W IRC4Q03036 179 aa7.51□□□□□ -1.21
RGD2YFL047W GFD1Q04839 188 aaKnown RBP7.51□□□□□ -1.21
RGD2YFL047W HCR1Q05775 265 aaKnown RBP7.51□□□□□ -1.21
RGD2YFL047W UBC1P21734 215 aaKnown RBP7.51□□□□□ -1.21
RGD2YFL047W STE11P23561 717 aa7.51□□□□□ -1.21
RGD2YFL047W MSH3P25336 1018 aa7.51□□□□□ -1.21
RGD2YFL047W YET1P35723 206 aa7.51□□□□□ -1.21
RGD2YFL047W RTS1P38903 757 aa7.51□□□□□ -1.21
RGD2YFL047W RAD26P40352 1085 aa7.51□□□□□ -1.21
RGD2YFL047W YIL055CP40523 627 aaKnown RBP7.51□□□□□ -1.21
RGD2YFL047W GDE1Q02979 1223 aa7.51□□□□□ -1.21
RGD2YFL047W MET6P05694 767 aaKnown RBP7.5□□□□□ -1.21
RGD2YFL047W MAK31P23059 88 aa7.5□□□□□ -1.21
RGD2YFL047W SEC65P29478 273 aa7.5□□□□□ -1.21
RGD2YFL047W APT1P49435 187 aaKnown RBP7.5□□□□□ -1.21
RGD2YFL047W YGR237CP50089 785 aa7.5□□□□□ -1.21
RGD2YFL047W UTP13Q05946 817 aaKnown RBP7.5□□□□□ -1.21
RGD2YFL047W BUG1Q12191 341 aa7.5□□□□□ -1.21
RGD2YFL047W CAF20P12962 161 aaKnown RBP7.49□□□□□ -1.21
RGD2YFL047W ASF1P32447 279 aa7.49□□□□□ -1.21
RGD2YFL047W MYO5Q04439 1219 aaKnown RBP7.49□□□□□ -1.21
RGD2YFL047W MRD1Q06106 887 aaKnown RBP7.49□□□□□ -1.21
RGD2YFL047W DIB1Q06819 143 aaPredicted RBP7.49□□□□□ -1.21
RGD2YFL047W RPS6AP0CX37 236 aaKnown RBP7.49□□□□□ -1.21
RGD2YFL047W RPS6BP0CX38 236 aaPredicted RBP7.49□□□□□ -1.21
RGD2YFL047W RNR3P21672 869 aaKnown RBP7.49□□□□□ -1.21
RGD2YFL047W PRO3P32263 286 aaKnown RBP7.49□□□□□ -1.21
RGD2YFL047W FRD1P32614 470 aaKnown RBP7.49□□□□□ -1.21
RGD2YFL047W SAP190P36123 1033 aa7.49□□□□□ -1.21
RGD2YFL047W SEC9P40357 651 aa7.49□□□□□ -1.21
RGD2YFL047W LSC2P53312 427 aa7.49□□□□□ -1.21
RGD2YFL047W ALF1P53904 254 aa7.49□□□□□ -1.21
RGD2YFL047W BDF2Q07442 638 aa7.49□□□□□ -1.21
RGD2YFL047W YKL068W-AQ3E826 78 aa7.49□□□□□ -1.21
RGD2YFL047W RIT1P23796 513 aa7.48□□□□□ -1.21
RGD2YFL047W KRE2P27809 442 aa7.48□□□□□ -1.21
RGD2YFL047W STO1P34160 861 aaKnown RBP7.48□□□□□ -1.21
RGD2YFL047W YFH7P43591 353 aa7.48□□□□□ -1.21
RGD2YFL047W VPS38Q05919 439 aa7.48□□□□□ -1.21
RGD2YFL047W RIX7Q07844 837 aaKnown RBP7.48□□□□□ -1.21
RGD2YFL047W PSR2Q07949 397 aa7.48□□□□□ -1.21
RGD2YFL047W ATG9Q12142 997 aa7.48□□□□□ -1.21
RGD2YFL047W NBL1Q3E7Y6 73 aa7.48□□□□□ -1.21
RGD2YFL047W NOP14Q99207 810 aaKnown RBP7.48□□□□□ -1.21
RGD2YFL047W HIR1P32479 840 aa7.48□□□□□ -1.21
RGD2YFL047W YGL138CP53122 345 aa7.48□□□□□ -1.21
RGD2YFL047W EBS1Q03466 884 aaKnown RBP7.48□□□□□ -1.21
RGD2YFL047W RRB1Q04225 511 aaKnown RBP7.48□□□□□ -1.21
RGD2YFL047W GIS4Q04233 774 aa7.48□□□□□ -1.21
RGD2YFL047W CDC37P06101 506 aaKnown RBP7.47□□□□□ -1.21
RGD2YFL047W SNF3P10870 884 aa7.47□□□□□ -1.21
RGD2YFL047W ALG1P16661 449 aa7.47□□□□□ -1.21
RGD2YFL047W BCD1P38772 366 aa7.47□□□□□ -1.21
RGD2YFL047W DAK2P43550 591 aa7.47□□□□□ -1.21
RGD2YFL047W UTP22P53254 1237 aaPredicted RBP7.47□□□□□ -1.21
RGD2YFL047W NSG2P53898 299 aa7.47□□□□□ -1.21
RGD2YFL047W NAF1P53919 492 aaKnown RBP7.47□□□□□ -1.21
RGD2YFL047W YDR341CQ05506 607 aaKnown RBP7.47□□□□□ -1.21
RGD2YFL047W TOS4Q06266 489 aa7.47□□□□□ -1.21
RGD2YFL047W YOR296WQ08748 1289 aa7.47□□□□□ -1.21
RGD2YFL047W CEX1Q12453 761 aa7.47□□□□□ -1.21
RGD2YFL047W HIS4P00815 799 aaKnown RBP7.46□□□□□ -1.21
RGD2YFL047W STI1P15705 589 aaKnown RBP RIP-Chip data7.46□□□□□ -1.21not detected
RGD2YFL047W MDL2P33311 773 aa7.46□□□□□ -1.21
RGD2YFL047W CTM1P38818 585 aa7.46□□□□□ -1.21
RGD2YFL047W SPT8P38915 602 aa7.46□□□□□ -1.21
RGD2YFL047W CAJ1P39101 391 aa7.46□□□□□ -1.21
RGD2YFL047W VID27P40157 782 aa7.46□□□□□ -1.21
RGD2YFL047W ALG2P43636 503 aa7.46□□□□□ -1.21
RGD2YFL047W AIP1P46680 615 aaKnown RBP7.46□□□□□ -1.21
RGD2YFL047W LYS4P49367 693 aaPredicted RBP7.46□□□□□ -1.21
RGD2YFL047W TLG2Q08144 397 aa7.46□□□□□ -1.21
RGD2YFL047W HMI1Q12039 706 aa7.46□□□□□ -1.21
RGD2YFL047W RAD61Q99359 647 aa7.46□□□□□ -1.21
RGD2YFL047W SPO11P23179 398 aa7.46□□□□□ -1.22
RGD2YFL047W SPB4P25808 606 aaPredicted RBP7.46□□□□□ -1.22
RGD2YFL047W DPB3P27344 201 aa7.46□□□□□ -1.22
RGD2YFL047W REI1P38344 393 aaPredicted RBP7.46□□□□□ -1.22
RGD2YFL047W BOP3P53958 396 aa7.46□□□□□ -1.22
RGD2YFL047W SML1Q04964 104 aa7.46□□□□□ -1.22
RGD2YFL047W YOL098CQ12496 1037 aa7.46□□□□□ -1.22
RGD2YFL047W PSO2P30620 661 aa7.45□□□□□ -1.22
RGD2YFL047W EFM2P38347 419 aa7.45□□□□□ -1.22
RGD2YFL047W ERG7P38604 731 aa7.45□□□□□ -1.22
RGD2YFL047W PRY3P47033 881 aa7.45□□□□□ -1.22
RGD2YFL047W RBA50Q04418 439 aa7.45□□□□□ -1.22
RGD2YFL047W YOL075CQ08234 1294 aa7.45□□□□□ -1.22
RGD2YFL047W MIP6P38760 659 aaKnown RBP7.45□□□□□ -1.22
RGD2YFL047W NDC80P40460 691 aa7.45□□□□□ -1.22
RGD2YFL047W FYV8P46949 817 aaKnown RBP7.45□□□□□ -1.22
RGD2YFL047W TIP41Q12199 356 aa7.45□□□□□ -1.22
RGD2YFL047W SEC23P15303 768 aaKnown RBP7.44□□□□□ -1.22
RGD2YFL047W MSH1P25846 959 aa7.44□□□□□ -1.22
RGD2YFL047W ATG3P40344 310 aa7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms