RNA–Protein interactions for RNA: YER109C

FLO8, Transcript of Transcription factor, yeast

Gene FLO8, Length 2,400 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FLO8	YER109C	PRE8	P23639	250 aa		4.9	□□□□□ -1.62
FLO8	YER109C	RPL8B	P29453	256 aa	Known RBP	4.9	□□□□□ -1.62
FLO8	YER109C	MAP2	P38174	421 aa	Known RBP	4.9	□□□□□ -1.62
FLO8	YER109C	BUD6	P41697	788 aa		4.9	□□□□□ -1.62
FLO8	YER109C	VPS30	Q02948	557 aa		4.9	□□□□□ -1.62
FLO8	YER109C	YDR461C-A	Q2V2P7	80 aa		4.9	□□□□□ -1.62
FLO8	YER109C	CDC6	P09119	513 aa		4.89	□□□□□ -1.63
FLO8	YER109C	FBP1	P09201	348 aa		4.89	□□□□□ -1.63
FLO8	YER109C	BIK1	P11709	440 aa		4.89	□□□□□ -1.63
FLO8	YER109C	MBR1	P23493	339 aa		4.89	□□□□□ -1.63
FLO8	YER109C	SIS2	P36024	562 aa		4.89	□□□□□ -1.63
FLO8	YER109C	RPN10	P38886	268 aa	Known RBP	4.89	□□□□□ -1.63
FLO8	YER109C	UBP9	P39967	754 aa		4.89	□□□□□ -1.63
FLO8	YER109C	ACA1	P39970	489 aa		4.89	□□□□□ -1.63
FLO8	YER109C	PEA2	P40091	420 aa		4.89	□□□□□ -1.63
FLO8	YER109C	RPT6	Q01939	405 aa	Known RBP	4.89	□□□□□ -1.63
FLO8	YER109C	SMD2	Q06217	110 aa	Known RBP	4.89	□□□□□ -1.63
FLO8	YER109C	RKM4	Q12504	494 aa		4.89	□□□□□ -1.63
FLO8	YER109C	RDS1	P25611	832 aa		4.88	□□□□□ -1.63
FLO8	YER109C	PRX1	P34227	261 aa	Known RBP	4.88	□□□□□ -1.63
FLO8	YER109C	SPO22	P40511	975 aa		4.88	□□□□□ -1.63
FLO8	YER109C	CTR1	P49573	406 aa		4.88	□□□□□ -1.63
FLO8	YER109C	OXR1	Q08952	273 aa		4.88	□□□□□ -1.63
FLO8	YER109C	PCL8	Q08966	492 aa		4.88	□□□□□ -1.63
FLO8	YER109C	MET6	P05694	767 aa	Known RBP	4.88	□□□□□ -1.63
FLO8	YER109C	MATALPHA2	P0CY08	210 aa		4.88	□□□□□ -1.63
FLO8	YER109C	HMLALPHA2	P0CY09	210 aa		4.88	□□□□□ -1.63
FLO8	YER109C	KIN1	P13185	1064 aa		4.88	□□□□□ -1.63
FLO8	YER109C	DID4	P36108	232 aa		4.88	□□□□□ -1.63
FLO8	YER109C	PCI8	P40512	444 aa		4.88	□□□□□ -1.63
FLO8	YER109C	EIS1	Q05050	843 aa	Known RBP	4.88	□□□□□ -1.63
FLO8	YER109C	HRQ1	Q05549	1077 aa		4.88	□□□□□ -1.63
FLO8	YER109C	UTP4	Q06679	776 aa	Known RBP	4.88	□□□□□ -1.63
FLO8	YER109C	SWI4	P25302	1093 aa	Known RBP	4.87	□□□□□ -1.63
FLO8	YER109C	SPB4	P25808	606 aa	Predicted RBP	4.87	□□□□□ -1.63
FLO8	YER109C	CST26	P38226	397 aa		4.87	□□□□□ -1.63
FLO8	YER109C	TPS3	P38426	1054 aa	Known RBP	4.87	□□□□□ -1.63
FLO8	YER109C	FOL1	P53848	824 aa		4.87	□□□□□ -1.63
FLO8	YER109C	CWC15	Q03772	175 aa	Known RBP	4.87	□□□□□ -1.63
FLO8	YER109C	APC11	Q12157	165 aa		4.87	□□□□□ -1.63
FLO8	YER109C	RGP1	P16664	663 aa		4.87	□□□□□ -1.63
FLO8	YER109C	SRP54	P20424	541 aa	Known RBP	4.87	□□□□□ -1.63
FLO8	YER109C	SHP1	P34223	423 aa		4.87	□□□□□ -1.63
FLO8	YER109C	VPS24	P36095	224 aa	Known RBP	4.87	□□□□□ -1.63
FLO8	YER109C	YIL089W	P40500	205 aa		4.87	□□□□□ -1.63
FLO8	YER109C	YJL007C	P47080	104 aa		4.87	□□□□□ -1.63
FLO8	YER109C	ASE1	P50275	885 aa		4.87	□□□□□ -1.63
FLO8	YER109C	PIL1	P53252	339 aa	Known RBP	4.87	□□□□□ -1.63
FLO8	YER109C	YGR273C	P53329	174 aa		4.87	□□□□□ -1.63
FLO8	YER109C	ECM23	Q02710	187 aa		4.87	□□□□□ -1.63
FLO8	YER109C	MYO5	Q04439	1219 aa	Known RBP	4.87	□□□□□ -1.63
FLO8	YER109C	CSR2	Q12734	1121 aa		4.87	□□□□□ -1.63
FLO8	YER109C	CIT1	P00890	479 aa		4.86	□□□□□ -1.63
FLO8	YER109C	SAM1	P10659	382 aa	Known RBP	4.86	□□□□□ -1.63
FLO8	YER109C	YDJ1	P25491	409 aa	Known RBP	4.86	□□□□□ -1.63
FLO8	YER109C	GEF1	P37020	779 aa		4.86	□□□□□ -1.63
FLO8	YER109C	MAL33	P38157	468 aa		4.86	□□□□□ -1.63
FLO8	YER109C	ORC6	P38826	435 aa		4.86	□□□□□ -1.63
FLO8	YER109C	YDR341C	Q05506	607 aa	Known RBP	4.86	□□□□□ -1.63
FLO8	YER109C	GIN4	Q12263	1142 aa		4.86	□□□□□ -1.63
FLO8	YER109C	FRS2	P15625	503 aa	Known RBP	4.86	□□□□□ -1.63
FLO8	YER109C	DIT2	P21595	489 aa		4.86	□□□□□ -1.63
FLO8	YER109C	BCH2	P36122	765 aa		4.86	□□□□□ -1.63
FLO8	YER109C	MAL31	P38156	614 aa		4.86	□□□□□ -1.63
FLO8	YER109C	YLR407W	Q06070	228 aa		4.86	□□□□□ -1.63
FLO8	YER109C	CSC1	Q06538	782 aa		4.86	□□□□□ -1.63
FLO8	YER109C	ELG1	Q12050	791 aa		4.86	□□□□□ -1.63
FLO8	YER109C	NUC1	P08466	329 aa		4.85	□□□□□ -1.63
FLO8	YER109C	IXR1	P33417	597 aa		4.85	□□□□□ -1.63
FLO8	YER109C	PEX14	P53112	341 aa		4.85	□□□□□ -1.63
FLO8	YER109C	EAF7	P53911	425 aa	Known RBP	4.85	□□□□□ -1.63
FLO8	YER109C	DCS2	Q12123	353 aa		4.85	□□□□□ -1.63
FLO8	YER109C	TRS33	Q99394	268 aa		4.85	□□□□□ -1.63
FLO8	YER109C	RNR3	P21672	869 aa	Known RBP	4.85	□□□□□ -1.63
FLO8	YER109C	NPL4	P33755	580 aa		4.85	□□□□□ -1.63
FLO8	YER109C	RXT2	P38255	430 aa		4.85	□□□□□ -1.63
FLO8	YER109C	VPS45	P38932	577 aa		4.85	□□□□□ -1.63
FLO8	YER109C	UBP10	P53874	792 aa	Predicted RBP	4.85	□□□□□ -1.63
FLO8	YER109C	AIM33	Q04516	312 aa		4.85	□□□□□ -1.63
FLO8	YER109C	SKG3	Q06315	1026 aa		4.85	□□□□□ -1.63
FLO8	YER109C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
FLO8	YER109C	TUF1	P02992	437 aa	Known RBP	4.84	□□□□□ -1.63
FLO8	YER109C	MPH3	P0CE00	602 aa		4.84	□□□□□ -1.63
FLO8	YER109C	ETP1	P38748	585 aa	Known RBP	4.84	□□□□□ -1.63
FLO8	YER109C	MDM1	Q01846	1127 aa		4.84	□□□□□ -1.63
FLO8	YER109C	YML037C	Q03703	340 aa		4.84	□□□□□ -1.63
FLO8	YER109C	TRS120	Q04183	1289 aa		4.84	□□□□□ -1.63
FLO8	YER109C	PEX19	Q07418	342 aa		4.84	□□□□□ -1.63
FLO8	YER109C	DSE3	Q08729	430 aa		4.84	□□□□□ -1.63
FLO8	YER109C	MSP1	P28737	362 aa		4.84	□□□□□ -1.64
FLO8	YER109C	YHL017W	P38745	532 aa		4.84	□□□□□ -1.64
FLO8	YER109C	CIR1	P42940	261 aa		4.84	□□□□□ -1.64
FLO8	YER109C	CIT3	P43635	486 aa		4.84	□□□□□ -1.64
FLO8	YER109C	YGL039W	P53183	348 aa	Known RBP	4.84	□□□□□ -1.64
FLO8	YER109C	SSL2	Q00578	843 aa		4.84	□□□□□ -1.64
FLO8	YER109C	PSR2	Q07949	397 aa		4.84	□□□□□ -1.64
FLO8	YER109C	HXK1	P04806	485 aa	Known RBP	4.83	□□□□□ -1.64
FLO8	YER109C	GAL2	P13181	574 aa		4.83	□□□□□ -1.64
FLO8	YER109C	MCM4	P30665	933 aa	Known RBP	4.83	□□□□□ -1.64
FLO8	YER109C	LYS14	P40971	790 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms