RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W TFB2Q02939 513 aa6.57□□□□□ -1.36
VMS1YDR049W ESC2Q06340 456 aa6.57□□□□□ -1.36
VMS1YDR049W GAS4Q08271 471 aa6.57□□□□□ -1.36
VMS1YDR049W SPT7P35177 1332 aa6.56□□□□□ -1.36
VMS1YDR049W CAN1P04817 590 aa6.56□□□□□ -1.36
VMS1YDR049W GUT1P32190 709 aa6.56□□□□□ -1.36
VMS1YDR049W NUP120P35729 1037 aa6.56□□□□□ -1.36
VMS1YDR049W YKL069WP36088 180 aa6.56□□□□□ -1.36
VMS1YDR049W GGA2P38817 585 aaKnown RBP6.56□□□□□ -1.36
VMS1YDR049W CDC45Q08032 650 aa6.56□□□□□ -1.36
VMS1YDR049W MED1Q12321 566 aa6.56□□□□□ -1.36
VMS1YDR049W NAT1P12945 854 aaKnown RBP6.56□□□□□ -1.36
VMS1YDR049W CDC60P26637 1090 aaKnown RBP6.56□□□□□ -1.36
VMS1YDR049W HAL5P38970 855 aaKnown RBP6.56□□□□□ -1.36
VMS1YDR049W ATP22P50273 684 aaPredicted RBP6.56□□□□□ -1.36
VMS1YDR049W GPG1P53130 126 aa6.56□□□□□ -1.36
VMS1YDR049W YGR053CP53234 283 aa6.56□□□□□ -1.36
VMS1YDR049W NST1P53935 1240 aa6.56□□□□□ -1.36
VMS1YDR049W UTP13Q05946 817 aaKnown RBP6.56□□□□□ -1.36
VMS1YDR049W YPL191CQ08930 360 aa6.56□□□□□ -1.36
VMS1YDR049W GAL1P04385 528 aa6.55□□□□□ -1.36
VMS1YDR049W CDC34P14682 295 aa6.55□□□□□ -1.36
VMS1YDR049W ACE2P21192 770 aa6.55□□□□□ -1.36
VMS1YDR049W MRF1P30775 413 aaPredicted RBP6.55□□□□□ -1.36
VMS1YDR049W IMP2'P32351 346 aa6.55□□□□□ -1.36
VMS1YDR049W NOP4P37838 685 aaKnown RBP6.55□□□□□ -1.36
VMS1YDR049W HXT5P38695 592 aa6.55□□□□□ -1.36
VMS1YDR049W RRP8P38961 392 aaKnown RBP6.55□□□□□ -1.36
VMS1YDR049W TIM11P81449 96 aaPredicted RBP6.55□□□□□ -1.36
VMS1YDR049W UME1Q03010 460 aa6.55□□□□□ -1.36
VMS1YDR049W RRP6Q12149 733 aaKnown RBP6.55□□□□□ -1.36
VMS1YDR049W YRR1Q12172 810 aa6.55□□□□□ -1.36
VMS1YDR049W DBP10Q12389 995 aaKnown RBP6.55□□□□□ -1.36
VMS1YDR049W RAD51P25454 400 aa6.54□□□□□ -1.36
VMS1YDR049W EUG1P32474 517 aa6.54□□□□□ -1.36
VMS1YDR049W YKL100CP34248 587 aa6.54□□□□□ -1.36
VMS1YDR049W MXR1P40029 184 aa6.54□□□□□ -1.36
VMS1YDR049W THI73Q07904 523 aa6.54□□□□□ -1.36
VMS1YDR049W OXR1Q08952 273 aa6.54□□□□□ -1.36
VMS1YDR049W CCP1P00431 361 aa6.53□□□□□ -1.36
VMS1YDR049W VAN1P23642 535 aa6.53□□□□□ -1.36
VMS1YDR049W PTP2P29461 750 aa6.53□□□□□ -1.36
VMS1YDR049W VMA8P32610 256 aaKnown RBP6.53□□□□□ -1.36
VMS1YDR049W MOT2P34909 587 aaKnown RBP6.53□□□□□ -1.36
VMS1YDR049W UGO1Q03327 502 aa6.53□□□□□ -1.36
VMS1YDR049W OSH2Q12451 1283 aa6.53□□□□□ -1.36
VMS1YDR049W CHS3P29465 1165 aa6.53□□□□□ -1.36
VMS1YDR049W MCM10P32354 571 aa6.53□□□□□ -1.36
VMS1YDR049W PLC1P32383 869 aa6.53□□□□□ -1.36
VMS1YDR049W YHL008CP38750 627 aa6.53□□□□□ -1.36
VMS1YDR049W TMA108P40462 946 aa6.53□□□□□ -1.36
VMS1YDR049W YPR109WQ06104 294 aa6.53□□□□□ -1.36
VMS1YDR049W TOS4Q06266 489 aa6.53□□□□□ -1.36
VMS1YDR049W SPN1Q06505 410 aaPredicted RBP6.53□□□□□ -1.36
VMS1YDR049W SSP2Q08646 371 aa6.53□□□□□ -1.36
VMS1YDR049W FAP7Q12055 197 aaPredicted RBP6.53□□□□□ -1.36
VMS1YDR049W GAP1P19145 602 aaPredicted RBP6.52□□□□□ -1.37
VMS1YDR049W SLY41P22215 453 aa6.52□□□□□ -1.37
VMS1YDR049W YDR286CQ05530 114 aa6.52□□□□□ -1.37
VMS1YDR049W RSC2Q06488 889 aa6.52□□□□□ -1.37
VMS1YDR049W SPO75Q07798 868 aa6.52□□□□□ -1.37
VMS1YDR049W NEW1Q08972 1196 aaKnown RBP6.52□□□□□ -1.37
VMS1YDR049W YDR056CQ12025 205 aa6.52□□□□□ -1.37
VMS1YDR049W TSC13Q99190 310 aa6.52□□□□□ -1.37
VMS1YDR049W TRS33Q99394 268 aa6.52□□□□□ -1.37
VMS1YDR049W HXK1P04806 485 aaKnown RBP6.51□□□□□ -1.37
VMS1YDR049W PXA2P34230 853 aa6.51□□□□□ -1.37
VMS1YDR049W ARH1P48360 493 aa6.51□□□□□ -1.37
VMS1YDR049W ENV11P53246 860 aa6.51□□□□□ -1.37
VMS1YDR049W BNI5P53890 448 aaKnown RBP6.51□□□□□ -1.37
VMS1YDR049W UFD2P54860 961 aa6.51□□□□□ -1.37
VMS1YDR049W YDR344CQ05510 147 aa6.51□□□□□ -1.37
VMS1YDR049W APA1P16550 321 aaKnown RBP6.51□□□□□ -1.37
VMS1YDR049W HSP60P19882 572 aaKnown RBP6.51□□□□□ -1.37
VMS1YDR049W TPD3P31383 635 aa6.51□□□□□ -1.37
VMS1YDR049W DBF20P32328 564 aa6.51□□□□□ -1.37
VMS1YDR049W HSP78P33416 811 aa6.51□□□□□ -1.37
VMS1YDR049W RIM4P38741 713 aa6.51□□□□□ -1.37
VMS1YDR049W CCT3P39077 534 aaKnown RBP6.51□□□□□ -1.37
VMS1YDR049W MAM1P40065 302 aa6.51□□□□□ -1.37
VMS1YDR049W ATG3P40344 310 aa6.51□□□□□ -1.37
VMS1YDR049W SGM1P47166 707 aa6.51□□□□□ -1.37
VMS1YDR049W TRE2Q08693 809 aa6.51□□□□□ -1.37
VMS1YDR049W SUV3P32580 737 aa6.5□□□□□ -1.37
VMS1YDR049W DUT1P33317 147 aa6.5□□□□□ -1.37
VMS1YDR049W TFC4P33339 1025 aa6.5□□□□□ -1.37
VMS1YDR049W YBR184WP38299 523 aa6.5□□□□□ -1.37
VMS1YDR049W FAA3P39002 694 aa6.5□□□□□ -1.37
VMS1YDR049W SUM1P46676 1062 aa6.5□□□□□ -1.37
VMS1YDR049W ELA1P53861 379 aaPredicted RBP6.5□□□□□ -1.37
VMS1YDR049W YNL193WP53870 558 aa6.5□□□□□ -1.37
VMS1YDR049W ISA1Q07821 250 aaPredicted RBP6.5□□□□□ -1.37
VMS1YDR049W APC5Q08683 685 aa6.5□□□□□ -1.37
VMS1YDR049W PGC1Q08959 321 aa6.5□□□□□ -1.37
VMS1YDR049W RPL8BP29453 256 aaKnown RBP6.49□□□□□ -1.37
VMS1YDR049W NPL4P33755 580 aa6.49□□□□□ -1.37
VMS1YDR049W SDH5Q08230 162 aa6.49□□□□□ -1.37
VMS1YDR049W FAL1Q12099 399 aaKnown RBP6.49□□□□□ -1.37
VMS1YDR049W INO80P53115 1489 aa6.49□□□□□ -1.37
VMS1YDR049W TRM1P15565 570 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms