RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	NUR1	Q12066	484 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	CPS1	P27614	576 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	GDA1	P32621	518 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	NUF2	P33895	451 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	SHE10	P53075	577 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	ADE12	P80210	433 aa	Known RBP	4.53	□□□□□ -1.68
PIM1	YBL022C	LHS1	P36016	881 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	MTR4	P47047	1073 aa	Known RBP	4.53	□□□□□ -1.68
PIM1	YBL022C	TMA22	P47089	198 aa	Predicted RBP	4.53	□□□□□ -1.68
PIM1	YBL022C	SNU71	P53207	620 aa	Known RBP	4.53	□□□□□ -1.68
PIM1	YBL022C	YGR122W	P53272	402 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	ADA2	Q02336	434 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	RLP24	Q07915	199 aa	Known RBP	4.53	□□□□□ -1.68
PIM1	YBL022C	CDC10	P25342	322 aa	Known RBP	4.53	□□□□□ -1.68
PIM1	YBL022C	CDC60	P26637	1090 aa	Known RBP	4.53	□□□□□ -1.68
PIM1	YBL022C	TAF1	P46677	1066 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	SPO19	Q03029	223 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	ATG26	Q06321	1198 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	ARR1	Q06596	294 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	YDR306C	Q06640	478 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	DNL4	Q08387	944 aa	Predicted RBP	4.53	□□□□□ -1.68
PIM1	YBL022C	ELG1	Q12050	791 aa		4.53	□□□□□ -1.68
PIM1	YBL022C	HXT1	P32465	570 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	STO1	P34160	861 aa	Known RBP	4.52	□□□□□ -1.69
PIM1	YBL022C	SMF1	P38925	575 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	YRB1	P41920	201 aa	Known RBP	4.52	□□□□□ -1.69
PIM1	YBL022C	STB1	P42845	420 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	MRPS35	P53292	345 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	YMR196W	Q04336	1088 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	KRE28	Q04431	385 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	POB3	Q04636	552 aa	Known RBP	4.52	□□□□□ -1.69
PIM1	YBL022C	LIN1	P38852	340 aa	Predicted RBP	4.52	□□□□□ -1.69
PIM1	YBL022C	GYP7	P48365	746 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	HUL5	P53119	910 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	SGD1	Q06132	899 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	LCB5	Q06147	687 aa	Known RBP	4.52	□□□□□ -1.69
PIM1	YBL022C	DCS2	Q12123	353 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	PAP1	P29468	568 aa	Known RBP	4.52	□□□□□ -1.69
PIM1	YBL022C	SEC66	P33754	206 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	VPS35	P34110	944 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	REI1	P38344	393 aa	Predicted RBP	4.52	□□□□□ -1.69
PIM1	YBL022C	BOI2	P39969	1040 aa		4.52	□□□□□ -1.69
PIM1	YBL022C	TMA64	Q04600	565 aa	Known RBP	4.52	□□□□□ -1.69
PIM1	YBL022C	TDA5	Q06417	326 aa	Known RBP	4.52	□□□□□ -1.69
PIM1	YBL022C	OSM1	P21375	501 aa	Known RBP	4.51	□□□□□ -1.69
PIM1	YBL022C	HCS1	P34243	683 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	OCT1	P35999	772 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	TDA3	P38758	523 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	SPT8	P38915	602 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	HST2	P53686	357 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	RSM24	Q03976	319 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	YLH47	Q06493	454 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	ADH4	P10127	382 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	CDC15	P27636	974 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	TYS1	P36421	394 aa	Known RBP	4.51	□□□□□ -1.69
PIM1	YBL022C	HOS4	P40480	1083 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	PXA1	P41909	870 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	TRS85	P46944	698 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	PRP43	P53131	767 aa	Known RBP	4.51	□□□□□ -1.69
PIM1	YBL022C	YPL109C	Q02981	657 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	PKH3	Q03306	898 aa	Predicted RBP	4.51	□□□□□ -1.69
PIM1	YBL022C	PPM1	Q04081	328 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	HIF1	Q12373	385 aa		4.51	□□□□□ -1.69
PIM1	YBL022C	MATALPHA2	P0CY08	210 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	HMLALPHA2	P0CY09	210 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	ECM4	P36156	370 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	APT1	P49435	187 aa	Known RBP	4.5	□□□□□ -1.69
PIM1	YBL022C	SUB1	P54000	292 aa	Known RBP	4.5	□□□□□ -1.69
PIM1	YBL022C	NKP1	Q12493	238 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	TY4B-P	A0A0B7P3V8	1104 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	BUD2	P33314	1104 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	VID27	P40157	782 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	SPO22	P40511	975 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	YIL001W	P40560	513 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	HGH1	P48362	394 aa	Known RBP	4.5	□□□□□ -1.69
PIM1	YBL022C	ERG5	P54781	538 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	YCG1	Q06680	1035 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	SUP45	P12385	437 aa	Known RBP	4.5	□□□□□ -1.69
PIM1	YBL022C	NAT1	P12945	854 aa	Known RBP	4.5	□□□□□ -1.69
PIM1	YBL022C	KAR2	P16474	682 aa	Known RBP	4.5	□□□□□ -1.69
PIM1	YBL022C	NTH2	P35172	780 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	YKR023W	P36119	530 aa	Known RBP	4.5	□□□□□ -1.69
PIM1	YBL022C	MCX1	P38323	520 aa	Predicted RBP	4.5	□□□□□ -1.69
PIM1	YBL022C	NUP60	P39705	539 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	GCN20	P43535	752 aa	Known RBP	4.5	□□□□□ -1.69
PIM1	YBL022C	ILM1	P47155	203 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	HFM1	P51979	1187 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	ASI1	P54074	624 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	MFM1	Q02783	413 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	VPS38	Q05919	439 aa		4.5	□□□□□ -1.69
PIM1	YBL022C	NOB1	Q08444	459 aa	Known RBP	4.5	□□□□□ -1.69
PIM1	YBL022C	SWI6	P09959	803 aa		4.49	□□□□□ -1.69
PIM1	YBL022C	SPO11	P23179	398 aa		4.49	□□□□□ -1.69
PIM1	YBL022C	UGA2	P38067	497 aa		4.49	□□□□□ -1.69
PIM1	YBL022C	RRM3	P38766	723 aa		4.49	□□□□□ -1.69
PIM1	YBL022C	YIR042C	P40586	236 aa		4.49	□□□□□ -1.69
PIM1	YBL022C	CCM1	P48237	864 aa	Predicted RBP	4.49	□□□□□ -1.69
PIM1	YBL022C	YML119W	Q03208	357 aa		4.49	□□□□□ -1.69
PIM1	YBL022C	SXM1	Q04175	944 aa	Known RBP	4.49	□□□□□ -1.69
PIM1	YBL022C	RBA50	Q04418	439 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms