RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W RSC30P38781 883 aa7.89□□□□□ -1.15
SWD1YAR003W YNL193WP53870 558 aa7.89□□□□□ -1.15
SWD1YAR003W TOP1P04786 769 aa7.88□□□□□ -1.15
SWD1YAR003W TPM1P17536 199 aaKnown RBP7.88□□□□□ -1.15
SWD1YAR003W ICL1P28240 557 aaPredicted RBP7.88□□□□□ -1.15
SWD1YAR003W OSH3P38713 996 aaKnown RBP7.88□□□□□ -1.15
SWD1YAR003W STM1P39015 273 aaKnown RBP7.88□□□□□ -1.15
SWD1YAR003W JJJ2P46997 583 aa7.88□□□□□ -1.15
SWD1YAR003W ALO1P54783 526 aaKnown RBP7.88□□□□□ -1.15
SWD1YAR003W KIN4Q01919 800 aa7.88□□□□□ -1.15
SWD1YAR003W RPN7Q06103 429 aaKnown RBP7.88□□□□□ -1.15
SWD1YAR003W FPR4Q06205 392 aaPredicted RBP7.88□□□□□ -1.15
SWD1YAR003W PMD1P32634 1753 aa7.87□□□□□ -1.15
SWD1YAR003W RET1P22276 1149 aaKnown RBP7.86□□□□□ -1.15
SWD1YAR003W SPL2P38839 148 aa7.86□□□□□ -1.15
SWD1YAR003W GCR2Q01722 534 aa7.86□□□□□ -1.15
SWD1YAR003W SYH1Q02875 849 aaKnown RBP7.86□□□□□ -1.15
SWD1YAR003W IRC4Q03036 179 aa7.86□□□□□ -1.15
SWD1YAR003W KTR3P38130 404 aaPredicted RBP7.85□□□□□ -1.15
SWD1YAR003W SHC1P39000 512 aa7.85□□□□□ -1.15
SWD1YAR003W DLD1P32891 587 aa7.84□□□□□ -1.15
SWD1YAR003W GEF1P37020 779 aa7.84□□□□□ -1.15
SWD1YAR003W BRN1P38170 754 aa7.84□□□□□ -1.15
SWD1YAR003W YIR042CP40586 236 aa7.84□□□□□ -1.15
SWD1YAR003W MRPS35P53292 345 aa7.84□□□□□ -1.15
SWD1YAR003W SQS1P53866 767 aaKnown RBP7.84□□□□□ -1.15
SWD1YAR003W INM2Q05533 292 aa7.84□□□□□ -1.15
SWD1YAR003W RIM20Q12033 661 aa7.84□□□□□ -1.15
SWD1YAR003W RRG1Q12167 365 aaPredicted RBP7.84□□□□□ -1.15
SWD1YAR003W RAD59Q12223 238 aa7.84□□□□□ -1.15
SWD1YAR003W CYB2P00175 591 aa7.83□□□□□ -1.16
SWD1YAR003W SSA1P10591 642 aaKnown RBP7.83□□□□□ -1.16
SWD1YAR003W LCB1P25045 558 aaKnown RBP7.83□□□□□ -1.16
SWD1YAR003W MDL2P33311 773 aa7.83□□□□□ -1.16
SWD1YAR003W GUA1P38625 525 aaKnown RBP7.83□□□□□ -1.16
SWD1YAR003W HAL5P38970 855 aaKnown RBP7.83□□□□□ -1.16
SWD1YAR003W GSM1P42950 618 aa7.83□□□□□ -1.16
SWD1YAR003W BRE2P43132 505 aa7.83□□□□□ -1.16
SWD1YAR003W YFH7P43591 353 aa7.83□□□□□ -1.16
SWD1YAR003W SEN54Q02825 467 aaPredicted RBP7.83□□□□□ -1.16
SWD1YAR003W PRP42Q03776 544 aaKnown RBP7.83□□□□□ -1.16
SWD1YAR003W MSM1P22438 575 aa7.82□□□□□ -1.16
SWD1YAR003W KIP2P28743 706 aa7.82□□□□□ -1.16
SWD1YAR003W BOI1P38041 980 aaKnown RBP7.82□□□□□ -1.16
SWD1YAR003W GLO3P38682 493 aaKnown RBP7.82□□□□□ -1.16
SWD1YAR003W RRP8P38961 392 aaKnown RBP7.82□□□□□ -1.16
SWD1YAR003W YMR147WP40218 223 aaKnown RBP7.82□□□□□ -1.16
SWD1YAR003W KRI1P42846 591 aaKnown RBP7.82□□□□□ -1.16
SWD1YAR003W IRC8P47046 822 aa7.82□□□□□ -1.16
SWD1YAR003W CRF1Q04930 467 aa7.82□□□□□ -1.16
SWD1YAR003W MET32Q12041 191 aa7.82□□□□□ -1.16
SWD1YAR003W OPI1P21957 404 aa7.81□□□□□ -1.16
SWD1YAR003W RPT3P33298 428 aaKnown RBP7.81□□□□□ -1.16
SWD1YAR003W PTK1P36002 662 aaPredicted RBP7.81□□□□□ -1.16
SWD1YAR003W PIP2P52960 996 aa7.81□□□□□ -1.16
SWD1YAR003W ACK1Q07622 623 aaPredicted RBP7.81□□□□□ -1.16
SWD1YAR003W WRS1Q12109 432 aaKnown RBP7.81□□□□□ -1.16
SWD1YAR003W SIS2P36024 562 aa7.8□□□□□ -1.16
SWD1YAR003W AAP1P37898 856 aaKnown RBP7.8□□□□□ -1.16
SWD1YAR003W PIB2P53191 635 aa7.8□□□□□ -1.16
SWD1YAR003W ATG20Q07528 640 aa7.8□□□□□ -1.16
SWD1YAR003W TAH18Q12181 623 aa7.8□□□□□ -1.16
SWD1YAR003W ARG82P07250 355 aa7.79□□□□□ -1.16
SWD1YAR003W AFT1P22149 690 aa7.79□□□□□ -1.16
SWD1YAR003W AFG2P32794 780 aa7.79□□□□□ -1.16
SWD1YAR003W IXR1P33417 597 aa7.79□□□□□ -1.16
SWD1YAR003W ASH1P34233 588 aa7.79□□□□□ -1.16
SWD1YAR003W IOC3P43596 787 aa7.79□□□□□ -1.16
SWD1YAR003W APL6P46682 809 aa7.79□□□□□ -1.16
SWD1YAR003W HST3P53687 447 aa7.79□□□□□ -1.16
SWD1YAR003W TOS4Q06266 489 aa7.79□□□□□ -1.16
SWD1YAR003W FIG2P25653 1609 aa7.78□□□□□ -1.16
SWD1YAR003W RNR2P09938 399 aaKnown RBP7.78□□□□□ -1.16
SWD1YAR003W MET1P36150 593 aa7.78□□□□□ -1.16
SWD1YAR003W HXT13P39924 564 aa7.78□□□□□ -1.16
SWD1YAR003W SLN1P39928 1220 aaPredicted RBP7.78□□□□□ -1.16
SWD1YAR003W YIR014WP40570 242 aa7.78□□□□□ -1.16
SWD1YAR003W HXT17P53631 564 aa7.78□□□□□ -1.16
SWD1YAR003W SSF2Q12153 453 aaPredicted RBP7.78□□□□□ -1.16
SWD1YAR003W DUR1,2P32528 1835 aaKnown RBP7.78□□□□□ -1.16
SWD1YAR003W FAS2P19097 1887 aaKnown RBP7.77□□□□□ -1.17
SWD1YAR003W VAC17P25591 423 aa7.77□□□□□ -1.17
SWD1YAR003W RPS7AP26786 190 aaKnown RBP7.77□□□□□ -1.17
SWD1YAR003W GRX7P38068 203 aa7.77□□□□□ -1.17
SWD1YAR003W TRM44Q02648 567 aaKnown RBP7.77□□□□□ -1.17
SWD1YAR003W GAS5Q08193 484 aa7.77□□□□□ -1.17
SWD1YAR003W HKR1P41809 1802 aa7.76□□□□□ -1.17
SWD1YAR003W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
SWD1YAR003W SPO22P40511 975 aa7.76□□□□□ -1.17
SWD1YAR003W TIM50Q02776 476 aa7.76□□□□□ -1.17
SWD1YAR003W KAR5Q04746 504 aa7.76□□□□□ -1.17
SWD1YAR003W MRD1Q06106 887 aaKnown RBP7.76□□□□□ -1.17
SWD1YAR003W ESF1Q06344 628 aaKnown RBP7.76□□□□□ -1.17
SWD1YAR003W RLF2Q12495 606 aa7.75□□□□□ -1.17
SWD1YAR003W SNF3P10870 884 aa7.74□□□□□ -1.17
SWD1YAR003W CIC1P38779 376 aaKnown RBP7.74□□□□□ -1.17
SWD1YAR003W ARP5P53946 755 aa7.74□□□□□ -1.17
SWD1YAR003W YPL260WQ08977 551 aa7.74□□□□□ -1.17
SWD1YAR003W LAM4P38800 1345 aa7.74□□□□□ -1.17
SWD1YAR003W SRS2P12954 1174 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms