RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Znf326O88291 580 aa12.1□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 TatQ8QZR1 454 aa12.1□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Cluap1Q8R3P7 413 aa12.1□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 TmpoQ61033 693 aaKnown RBP12.1□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Ttc21aQ8C0S4 1314 aa12.1□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Pibf1E9Q6K3 756 aa12.1□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Fgd1P52734 960 aa12.09□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Q8BT18 775 aa12.09□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Nlgn1Q99K10 843 aa12.09□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Lmod3E9QA62 571 aa12.08□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Ccne1Q61457 408 aa12.08□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Smc5Q8CG46 1101 aaKnown RBP12.08□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 HypkQ9CR41 129 aa12.08□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Irx6Q9ER75 438 aa12.08□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Fam135bQ9DAI6 1403 aa12.08□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Sos1Q62245 1319 aa12.07□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Gsdma3Q5Y4Y6 464 aa12.07□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Nutm1Q8BHP2 1126 aa12.07□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Kdm2bQ6P1G2 1309 aa12.07□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Q3TQI7 289 aaKnown RBP12.07□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Ccdc9Q8VC31 543 aaKnown RBP12.07□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Hsp90aa1P07901 733 aaKnown RBP12.06□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Atf3Q60765 181 aa12.06□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Plekhm2Q80TQ5 1018 aa12.06□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Pik3c2bE9QAN8 1632 aa12.06□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Usp32F8VPZ3 1604 aa12.06□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Bcl9Q9D219 1425 aa12.06□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Pip4k2bQ80XI4 416 aa12.06□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Ipo9Q91YE6 1041 aa12.06□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Maco1Q7TQE6 664 aaKnown RBP12.06□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 TimelessQ9R1X4 1197 aa12.06□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Duxf3A0A0N4SV92 674 aa12.05□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Fmnl2A2APV2 1086 aa12.05□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Uhrf1bp1B2KF50 1429 aa12.05□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 CemipQ8BI06 1361 aa12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Kcnh5Q920E3 988 aa12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Nckap5lQ6GQX2 1323 aa12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Map7O88735 730 aa12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Hsp90ab1P11499 724 aaKnown RBP12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Ric3Q8BPM6 367 aa12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Atl3Q91YH5 541 aa12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 CanxP35564 591 aaKnown RBP12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Ggnbp2Q5SV77 696 aa12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Cdk12Q14AX6 1484 aaKnown RBP12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Vamp4O70480 141 aa12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Aldh1l1Q8R0Y6 902 aa12.04□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Tns3Q5SSZ5 1440 aa12.03□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Eya1P97767 591 aa12.03□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Tmem132eQ6IEE6 982 aa12.03□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Rad17Q6NXW6 688 aa12.03□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Tnrc6bQ8BKI2 1810 aaKnown RBP12.03□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 HnrnpuQ8VEK3 800 aaKnown RBP12.02□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Klhdc4Q921I2 584 aa12.02□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 FancaQ9JL70 1439 aa12.02□□□□□ -0.48
Sh3rf1-202ENSMUST00000209611 Hoxc9P09633 260 aa12.02□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Q3UPC7 1272 aa12.02□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Slc35g1Q8BY79 368 aa12.02□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Slain2Q8CI08 581 aa12.02□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Znf541Q0GGX2 1363 aa12.02□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Abcc10Q8R4P9 1501 aa12.02□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Scaf1Q5U4C3 1256 aaKnown RBP12.02□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Farp2Q91VS8 1065 aa12.02□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Tnnt1O88346 262 aa12.01□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Ipo8Q7TMY7 1010 aa12.01□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 GnpatP98192 678 aa12.01□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Ppm1gQ61074 542 aa12.01□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Kif1aP33173 1695 aa12.01□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 KarsQ99MN1 595 aaKnown RBP12.01□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Atp7bQ64446 1462 aa12□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Arap3Q8R5G7 1538 aa12□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Lmtk3Q5XJV6 1424 aa12□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 MvpQ9EQK5 861 aa12□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Zmym3Q9JLM4 1370 aa11.99□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 ArxO35085 564 aa11.99□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 KnstrnQ9D9Z1 312 aaKnown RBP11.99□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Sv2bQ8BG39 683 aa11.98□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Ppp1r3fQ9JIG4 799 aa11.98□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Wdr17E9Q271 1322 aa11.98□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 IbspQ61711 324 aa11.98□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Cavin2Q63918 418 aaKnown RBP11.98□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Tmem2Q5FWI3 1383 aa11.98□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Ncoa4Q5U4H9 625 aa11.97□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Ak7Q9D2H2 614 aa11.97□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Rims2Q9EQZ7 1530 aa11.97□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Znf521Q6KAS7 1311 aa11.97□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Ppp2r3aB2RXC8 1150 aa11.97□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Ano8Q6PB70 1060 aa11.97□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Dnajc10Q9DC23 793 aa11.97□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Rlbp1Q9Z275 317 aa11.97□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Nsd3Q6P2L6 1439 aa11.97□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Gm10471E9Q1C7 252 aa11.96□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Gm21698A0A087WQP8 267 aa11.96□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Gm21671G3UY31 267 aa11.96□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Dzip1Q8BMD2 852 aa11.96□□□□□ -0.49
Sh3rf1-202ENSMUST00000209611 Ankrd44B2RXR6 993 aa11.96□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 ChgaP26339 463 aaKnown RBP11.96□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 SkilQ60665 675 aa11.96□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Ccdc183A2AJB1 534 aa11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Hs1bp3Q3TC93 395 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms