RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Nom1Q3UFM5 854 aaKnown RBP27.21■■□□□ 1.95
Ccdc9-201ENSMUST00000041010 Sirt1Q923E4 737 aa27.21■■□□□ 1.95
Ccdc9-201ENSMUST00000041010 Rims2Q9EQZ7 1530 aa27.2■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Zranb1Q7M760 708 aa27.2■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Cald1E9QA15 768 aaKnown RBP27.19■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 HnrnpmQ9D0E1 729 aaKnown RBP27.19■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 N4bp2F8VQG7 1678 aaKnown RBP27.18■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Map3k19E9Q3S4 1311 aa27.18■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 IbtkQ6ZPR6 1352 aaKnown RBP27.18■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Kif1aP33173 1695 aa27.17■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Dhx16G3X8X0 1044 aaKnown RBP27.17■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 NinlQ6ZQ12 1394 aa27.16■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Map7O88735 730 aa27.16■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Hs1bp3Q3TC93 395 aa27.16■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Rsph3aQ3UFY4 516 aa27.16■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Iqsec2Q5DU25 1478 aa27.16■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 MlecQ6ZQI3 291 aaKnown RBP27.15■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Idi2Q8BFZ6 227 aa27.15■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Atxn3Q9CVD2 355 aa27.14■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Med1Q925J9 1575 aa27.14■■□□□ 1.94
Ccdc9-201ENSMUST00000041010 Nsfl1cQ9CZ44 370 aaKnown RBP27.13■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 C5P06684 1680 aa27.13■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Als2Q920R0 1651 aa27.12■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Rbm25B2RY56 838 aaKnown RBP27.12■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Q3UJC8 639 aa27.11■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Prdm10Q3UTQ7 1184 aa27.11■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Phlpp1Q8CHE4 1687 aa27.11■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Ripk4Q9ERK0 786 aa27.11■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Ncapd2Q8K2Z4 1392 aa27.1■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Polr3glQ8R0C0 218 aa27.09■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Cluap1Q8R3P7 413 aa27.09■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Irf5P56477 497 aa27.09■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Thsd7aQ69ZU6 1645 aa27.08■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Gm10093D3YYI8 482 aa27.08■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Hdac1O09106 482 aaKnown RBP27.08■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 Mon2Q80TL7 1715 aa27.08■■□□□ 1.93
Ccdc9-201ENSMUST00000041010 VgfQ0VGU4 617 aa27.07■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Pdia4P08003 638 aaKnown RBP27.07■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 CatipB9EKE5 520 aa27.06■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Pdcl2Q78Y63 240 aa27.06■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Rbm10Q99KG3 930 aaKnown RBP27.06■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Rfx1P48377 963 aa27.05■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Unc13bQ9Z1N9 1602 aa27.05■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Gse1Q3U3C9 1213 aa27.05■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Erbb4Q61527 1308 aa27.04■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 DekQ7TNV0 380 aaKnown RBP27.04■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Kif18aQ91WD7 886 aa27.04■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Abcc10Q8R4P9 1501 aa27.04■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Znf335A2A5K6 1337 aa27.03■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 AU019823E9PUQ3 292 aa27.03■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 GsdmaQ9EST1 446 aa27.03■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Ksr2Q3UVC0 959 aa27.02■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 Ccar1Q8CH18 1146 aaKnown RBP27.01■■□□□ 1.92
Ccdc9-201ENSMUST00000041010 P2rx7Q9Z1M0 595 aa27.01■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Nrxn3Q6P9K9 1571 aa26.99■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Ppp1r3fQ9JIG4 799 aa26.98■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 ScaperF8VQ70 1398 aaKnown RBP26.98■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Tmx3Q8BXZ1 456 aa26.98■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Chrna2Q91X60 512 aa26.98■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Mdc1Q5PSV9 1707 aa26.97■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Cog6Q8R3I3 657 aa26.97■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Ush1cQ9ES64 910 aa26.97■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Chd4Q6PDQ2 1915 aaKnown RBP26.97■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Col14a1Q80X19 1797 aa26.97■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Trim26Q99PN3 545 aa26.97■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 KnstrnQ9D9Z1 312 aaKnown RBP26.97■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Zfp91Q62511 572 aa26.96■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Kdm4cQ8VCD7 1054 aa26.96■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 NalcnQ8BXR5 1738 aa26.95■■□□□ 1.91
Ccdc9-201ENSMUST00000041010 Ncbp3Q8BZR9 615 aaKnown RBP26.95■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 SkilQ60665 675 aa26.94■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Mknk2Q8CDB0 459 aa26.94■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Znf316Q6PGE4 1016 aa26.94■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Tns3Q5SSZ5 1440 aa26.94■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Astn2Q80Z10 1352 aa26.94■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Hoxb7P09024 217 aa26.93■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Fez1Q8K0X8 392 aa26.93■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Brd1E9PZ26 1189 aaKnown RBP26.92■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Erich6bQ9D4S6 220 aa26.92■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 C3P01027 1663 aa26.92■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Lekr1B2RVN1 116 aa26.92■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Znf541Q0GGX2 1363 aa26.9■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Trim28Q62318 834 aa26.9■■□□□ 1.9
Ccdc9-201ENSMUST00000041010 Tsen2Q6P7W5 460 aa26.89■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 Gm10563F6WIE4 79 aa26.87■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 Brwd3A2AHJ4 1799 aa26.87■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 Becn1O88597 448 aa26.87■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 Bag4Q8CI61 457 aa26.87■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 Pik3c2aQ61194 1686 aa26.87■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 Tmem94Q7TSH8 1360 aa26.86■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 CemipQ8BI06 1361 aa26.85■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 Col16a1Q8BLX7 1580 aa26.84■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 Bloc1s4Q8VED2 215 aa26.84■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 Apaf1O88879 1249 aa26.84■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 Tfip11Q9ERA6 838 aaKnown RBP26.84■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 U2af1Q9D883 239 aaKnown RBP26.83■■□□□ 1.89
Ccdc9-201ENSMUST00000041010 Scn7aB1AYL1 1681 aa26.82■■□□□ 1.88
Ccdc9-201ENSMUST00000041010 Ubr1O70481 1757 aa26.82■■□□□ 1.88
Ccdc9-201ENSMUST00000041010 Casq1O09165 405 aa26.82■■□□□ 1.88
Ccdc9-201ENSMUST00000041010 Ppp1r15aP17564 657 aa26.82■■□□□ 1.88
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms