RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Cog6Q8R3I3 657 aa18.95■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 MvpQ9EQK5 861 aa18.95■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 PtpruB1AUH1 1446 aa18.94■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 Kif1aP33173 1695 aa18.94■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 Brd1E9PZ26 1189 aaKnown RBP18.93■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 Usp16Q99LG0 825 aa18.93■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 IghaA0A0A6YXW6 389 aa18.93■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 U2surpQ6NV83 1029 aaKnown RBP18.93■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 Spef2Q8C9J3 1734 aa18.92■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 Aplp1Q03157 653 aa18.92■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 Ankrd44B2RXR6 993 aa18.91■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 Gtf3c3Q3TMP1 882 aa18.91■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 KnstrnQ9D9Z1 312 aaKnown RBP18.91■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 CatipB9EKE5 520 aa18.91■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 Kif2cQ922S8 721 aa18.91■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 Gemin5Q8BX17 1502 aaKnown RBP18.9■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 Klhdc4Q921I2 584 aa18.89■□□□□ 0.62
Nkx3-1-201ENSMUST00000022646 HnrnpmQ9D0E1 729 aaKnown RBP18.88■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Hoxb7P09024 217 aa18.88■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Wwc1Q5SXA9 1104 aa18.88■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Chmp4bQ9D8B3 224 aaKnown RBP18.88■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Pik3c2bE9QAN8 1632 aa18.87■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Cps1Q8C196 1500 aa18.87■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 MpripP97434 1024 aa18.87■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Eif4a2P10630 407 aa18.86■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Stk31Q99MW1 1018 aa18.86■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Chd4Q6PDQ2 1915 aaKnown RBP18.86■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Catsper2A2ARP9 588 aa18.85■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Sos1Q62245 1319 aa18.85■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 LifrP42703 1092 aa18.84■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Dip2bQ3UH60 1574 aa18.84■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Ric3Q8BPM6 367 aa18.84■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Cetn4Q8K4K1 168 aa18.84■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Cavin2Q63918 418 aaKnown RBP18.84■□□□□ 0.61
Nkx3-1-201ENSMUST00000022646 Wdr63B2RY71 923 aa18.83■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Terf2O35144 541 aa18.83■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 CarsQ9ER72 831 aaKnown RBP18.83■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 MarsQ68FL6 902 aaKnown RBP18.83■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Antxr1Q9CZ52 562 aa18.83■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Tnrc6bQ8BKI2 1810 aaKnown RBP18.82■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Trim27Q62158 513 aa18.82■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 NgefQ8CHT1 710 aa18.82■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 1700019A02RikA0A087WPV9 146 aa18.81■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Astn2Q80Z10 1352 aa18.79■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Kif24Q6NWW5 1356 aa18.79■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Slit3Q9WVB4 1523 aa18.78■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Aifm3Q3TY86 605 aa18.78■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Q3UJC8 639 aa18.78■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Tbc1d9Q3UYK3 1264 aa18.78■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Spryd3E9Q9B3 442 aa18.78■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Nek4Q9Z1J2 792 aa18.78■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Gm10093D3YYI8 482 aa18.77■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Hdac1O09106 482 aaKnown RBP18.77■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 PzpQ61838 1495 aa18.77■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Chd2E9PZM4 1827 aaKnown RBP18.77■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Dnajc5gQ8C632 165 aa18.77■□□□□ 0.6
Nkx3-1-201ENSMUST00000022646 Pibf1E9Q6K3 756 aa18.77■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 GorabQ8BRM2 368 aa18.77■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Triml2E9PW10 424 aa18.76■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 HnrnpuQ8VEK3 800 aaKnown RBP18.76■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Ccdc146E9Q9F7 977 aa18.75■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Sirt1Q923E4 737 aa18.75■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Tfip11Q9ERA6 838 aaKnown RBP18.75■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Rfx1P48377 963 aa18.75■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 TmpoQ61033 693 aaKnown RBP18.75■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Eif4g2Q62448 906 aaKnown RBP18.75■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Rab11fip3Q8CHD8 1047 aa18.75■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Med1Q925J9 1575 aa18.74■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Cgnl1Q6AW69 1298 aa18.74■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Nsfl1cQ9CZ44 370 aaKnown RBP18.74■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Chl1P70232 1209 aa18.74■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Ggnbp2Q5SV77 696 aa18.73■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Aldh1l2Q8K009 923 aa18.73■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Kif20bQ80WE4 1774 aaKnown RBP18.73■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Plppr3Q7TPB0 716 aa18.73■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Znf335A2A5K6 1337 aa18.72■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Sox12Q04890 314 aa18.72■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Aldh8a1Q8BH00 487 aa18.72■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 FanclQ9CR14 375 aa18.72■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 N4bp2F8VQG7 1678 aaKnown RBP18.72■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 4930407I10RikD3Z5T8 1512 aa18.71■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Safb2Q80YR5 991 aaKnown RBP18.71■□□□□ 0.59
Nkx3-1-201ENSMUST00000022646 Fgd1P52734 960 aa18.71■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Ssh1Q76I79 1042 aa18.71■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 CemipQ8BI06 1361 aa18.7■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Rreb1Q3UH06 1700 aaKnown RBP18.7■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Mdc1Q5PSV9 1707 aa18.7■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Fam13aQ8BGI4 693 aa18.7■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Tm6sf1P58749 370 aa18.69■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Prim1P20664 417 aa18.69■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Gcc1Q9D4H2 778 aa18.69■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Cdk12Q14AX6 1484 aaKnown RBP18.69■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 NalcnQ8BXR5 1738 aa18.68■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Rtf1A2AQ19 715 aaKnown RBP18.68■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Prkar2bP31324 416 aa18.68■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 CenppQ9CZ92 286 aa18.68■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Snap23O09044 210 aa18.67■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Smarca5Q91ZW3 1051 aaKnown RBP18.67■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Adgrb1Q3UHD1 1582 aa18.67■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Parp14Q2EMV9 1817 aa18.67■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms