RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Ddit3P35639 168 aa14.22□□□□□ -0.13
Vps54-201ENSMUST00000006221 Ipo4Q8VI75 1082 aa14.22□□□□□ -0.13
Vps54-201ENSMUST00000006221 Usp16Q99LG0 825 aa14.22□□□□□ -0.13
Vps54-201ENSMUST00000006221 Ankrd44B2RXR6 993 aa14.22□□□□□ -0.13
Vps54-201ENSMUST00000006221 Dnttip2Q8R2M2 758 aaKnown RBP14.22□□□□□ -0.13
Vps54-201ENSMUST00000006221 KnstrnQ9D9Z1 312 aaKnown RBP14.22□□□□□ -0.13
Vps54-201ENSMUST00000006221 Wdr63B2RY71 923 aa14.22□□□□□ -0.13
Vps54-201ENSMUST00000006221 Usp32F8VPZ3 1604 aa14.21□□□□□ -0.13
Vps54-201ENSMUST00000006221 Ppp1r15aP17564 657 aa14.21□□□□□ -0.13
Vps54-201ENSMUST00000006221 Mcm4P49717 862 aa14.21□□□□□ -0.13
Vps54-201ENSMUST00000006221 Tbc1d9Q3UYK3 1264 aa14.21□□□□□ -0.13
Vps54-201ENSMUST00000006221 Nek4Q9Z1J2 792 aa14.2□□□□□ -0.14
Vps54-201ENSMUST00000006221 Gnai1B2RSH2 354 aa14.19□□□□□ -0.14
Vps54-201ENSMUST00000006221 Aifm3Q3TY86 605 aa14.19□□□□□ -0.14
Vps54-201ENSMUST00000006221 Rsph6aQ8CDR2 708 aa14.19□□□□□ -0.14
Vps54-201ENSMUST00000006221 Gnai3Q9DC51 354 aa14.19□□□□□ -0.14
Vps54-201ENSMUST00000006221 CarsQ9ER72 831 aaKnown RBP14.19□□□□□ -0.14
Vps54-201ENSMUST00000006221 Itsn1Q9Z0R4 1714 aa14.19□□□□□ -0.14
Vps54-201ENSMUST00000006221 Gm10093D3YYI8 482 aa14.19□□□□□ -0.14
Vps54-201ENSMUST00000006221 Hdac1O09106 482 aaKnown RBP14.19□□□□□ -0.14
Vps54-201ENSMUST00000006221 Trim27Q62158 513 aa14.19□□□□□ -0.14
Vps54-201ENSMUST00000006221 Plcb2A3KGF7 1181 aa14.19□□□□□ -0.14
Vps54-201ENSMUST00000006221 Il4rP16382 810 aa14.19□□□□□ -0.14
Vps54-201ENSMUST00000006221 LifrP42703 1092 aa14.18□□□□□ -0.14
Vps54-201ENSMUST00000006221 Ercc6l2Q9JIM3 1537 aa14.18□□□□□ -0.14
Vps54-201ENSMUST00000006221 1700019A02RikA0A087WPV9 146 aa14.18□□□□□ -0.14
Vps54-201ENSMUST00000006221 IghaA0A0A6YXW6 389 aa14.17□□□□□ -0.14
Vps54-201ENSMUST00000006221 Ccdc146E9Q9F7 977 aa14.17□□□□□ -0.14
Vps54-201ENSMUST00000006221 Wwc1Q5SXA9 1104 aa14.17□□□□□ -0.14
Vps54-201ENSMUST00000006221 Kcnn1Q9EQR3 537 aa14.17□□□□□ -0.14
Vps54-201ENSMUST00000006221 Stk11ipQ3TAA7 1072 aa14.17□□□□□ -0.14
Vps54-201ENSMUST00000006221 Plekhg1F6S200 1446 aa14.16□□□□□ -0.14
Vps54-201ENSMUST00000006221 Nwd1A6H603 1563 aa14.16□□□□□ -0.14
Vps54-201ENSMUST00000006221 Fgd1P52734 960 aa14.16□□□□□ -0.14
Vps54-201ENSMUST00000006221 Ric3Q8BPM6 367 aa14.16□□□□□ -0.14
Vps54-201ENSMUST00000006221 Pibf1E9Q6K3 756 aa14.16□□□□□ -0.14
Vps54-201ENSMUST00000006221 MpripP97434 1024 aa14.16□□□□□ -0.14
Vps54-201ENSMUST00000006221 FanclQ9CR14 375 aa14.15□□□□□ -0.14
Vps54-201ENSMUST00000006221 Triml2E9PW10 424 aa14.15□□□□□ -0.14
Vps54-201ENSMUST00000006221 MarsQ68FL6 902 aaKnown RBP14.14□□□□□ -0.15
Vps54-201ENSMUST00000006221 Cetn4Q8K4K1 168 aa14.14□□□□□ -0.15
Vps54-201ENSMUST00000006221 Ppp1r18Q8BQ30 594 aa14.14□□□□□ -0.15
Vps54-201ENSMUST00000006221 Kif24Q6NWW5 1356 aa14.13□□□□□ -0.15
Vps54-201ENSMUST00000006221 PplQ9R269 1755 aa14.13□□□□□ -0.15
Vps54-201ENSMUST00000006221 Idi2Q8BFZ6 227 aa14.13□□□□□ -0.15
Vps54-201ENSMUST00000006221 Smarca5Q91ZW3 1051 aaKnown RBP14.13□□□□□ -0.15
Vps54-201ENSMUST00000006221 Eif4a2P10630 407 aa14.12□□□□□ -0.15
Vps54-201ENSMUST00000006221 Txndc2Q6P902 515 aa14.12□□□□□ -0.15
Vps54-201ENSMUST00000006221 Psme1P97371 249 aa14.12□□□□□ -0.15
Vps54-201ENSMUST00000006221 Synj2Q9D2G5 1434 aa14.12□□□□□ -0.15
Vps54-201ENSMUST00000006221 AU015836B2RUM3 263 aa14.11□□□□□ -0.15
Vps54-201ENSMUST00000006221 Rsph3aQ3UFY4 516 aa14.11□□□□□ -0.15
Vps54-201ENSMUST00000006221 DekQ7TNV0 380 aaKnown RBP14.11□□□□□ -0.15
Vps54-201ENSMUST00000006221 Spef2Q8C9J3 1734 aa14.1□□□□□ -0.15
Vps54-201ENSMUST00000006221 Chd4Q6PDQ2 1915 aaKnown RBP14.1□□□□□ -0.15
Vps54-201ENSMUST00000006221 Ggnbp2Q5SV77 696 aa14.09□□□□□ -0.15
Vps54-201ENSMUST00000006221 Fam13aQ8BGI4 693 aa14.09□□□□□ -0.15
Vps54-201ENSMUST00000006221 Snap23O09044 210 aa14.09□□□□□ -0.15
Vps54-201ENSMUST00000006221 Eif4g2Q62448 906 aaKnown RBP14.09□□□□□ -0.15
Vps54-201ENSMUST00000006221 Stk31Q99MW1 1018 aa14.09□□□□□ -0.15
Vps54-201ENSMUST00000006221 Vsig10D3YX43 558 aa14.09□□□□□ -0.15
Vps54-201ENSMUST00000006221 EngaseQ8BX80 734 aa14.09□□□□□ -0.15
Vps54-201ENSMUST00000006221 NgefQ8CHT1 710 aa14.09□□□□□ -0.15
Vps54-201ENSMUST00000006221 Cavin2Q63918 418 aaKnown RBP14.08□□□□□ -0.16
Vps54-201ENSMUST00000006221 HnrnpmQ9D0E1 729 aaKnown RBP14.08□□□□□ -0.16
Vps54-201ENSMUST00000006221 Kdm4cQ8VCD7 1054 aa14.08□□□□□ -0.16
Vps54-201ENSMUST00000006221 PtpruB1AUH1 1446 aa14.07□□□□□ -0.16
Vps54-201ENSMUST00000006221 Prim1P20664 417 aa14.07□□□□□ -0.16
Vps54-201ENSMUST00000006221 CenppQ9CZ92 286 aa14.07□□□□□ -0.16
Vps54-201ENSMUST00000006221 Chmp4bQ9D8B3 224 aaKnown RBP14.07□□□□□ -0.16
Vps54-201ENSMUST00000006221 Aldh8a1Q8BH00 487 aa14.07□□□□□ -0.16
Vps54-201ENSMUST00000006221 Rab11fip3Q8CHD8 1047 aa14.07□□□□□ -0.16
Vps54-201ENSMUST00000006221 Ppp6r3Q922D4 844 aa14.07□□□□□ -0.16
Vps54-201ENSMUST00000006221 Phf14Q9D4H9 881 aa14.07□□□□□ -0.16
Vps54-201ENSMUST00000006221 Cc2d1aQ8K1A6 943 aa14.07□□□□□ -0.16
Vps54-201ENSMUST00000006221 CatipB9EKE5 520 aa14.06□□□□□ -0.16
Vps54-201ENSMUST00000006221 CalcaP70160 136 aa14.06□□□□□ -0.16
Vps54-201ENSMUST00000006221 Chl1P70232 1209 aa14.06□□□□□ -0.16
Vps54-201ENSMUST00000006221 Prkar2bP31324 416 aa14.06□□□□□ -0.16
Vps54-201ENSMUST00000006221 Bloc1s4Q8VED2 215 aa14.06□□□□□ -0.16
Vps54-201ENSMUST00000006221 Ppip5k2Q6ZQB6 1129 aa14.06□□□□□ -0.16
Vps54-201ENSMUST00000006221 Sos1Q62245 1319 aa14.06□□□□□ -0.16
Vps54-201ENSMUST00000006221 Ncapd2Q8K2Z4 1392 aa14.06□□□□□ -0.16
Vps54-201ENSMUST00000006221 SlkO54988 1233 aa14.06□□□□□ -0.16
Vps54-201ENSMUST00000006221 Pdia3P27773 505 aaKnown RBP14.05□□□□□ -0.16
Vps54-201ENSMUST00000006221 Tm6sf1P58749 370 aa14.05□□□□□ -0.16
Vps54-201ENSMUST00000006221 4930407I10RikD3Z5T8 1512 aa14.05□□□□□ -0.16
Vps54-201ENSMUST00000006221 Kif1aP33173 1695 aa14.05□□□□□ -0.16
Vps54-201ENSMUST00000006221 TmpoQ61033 693 aaKnown RBP14.04□□□□□ -0.16
Vps54-201ENSMUST00000006221 Pdcl3Q8BVF2 240 aa14.04□□□□□ -0.16
Vps54-201ENSMUST00000006221 4933402E13RikQ9D4D2 429 aa14.04□□□□□ -0.16
Vps54-201ENSMUST00000006221 Dip2aQ8BWT5 1523 aa14.04□□□□□ -0.16
Vps54-201ENSMUST00000006221 Zc3h13E9Q784 1729 aaKnown RBP14.04□□□□□ -0.16
Vps54-201ENSMUST00000006221 HnrnpuQ8VEK3 800 aaKnown RBP14.04□□□□□ -0.16
Vps54-201ENSMUST00000006221 Pik3c2bE9QAN8 1632 aa14.04□□□□□ -0.16
Vps54-201ENSMUST00000006221 Atg4a-psA0A0G2JFS9 396 aa14.04□□□□□ -0.16
Vps54-201ENSMUST00000006221 Cgnl1Q6AW69 1298 aa14.04□□□□□ -0.16
Vps54-201ENSMUST00000006221 Atg4aQ8C9S8 396 aa14.04□□□□□ -0.16
Vps54-201ENSMUST00000006221 Nucb1Q02819 459 aaKnown RBP14.03□□□□□ -0.16
Vps54-201ENSMUST00000006221 NpatQ8BMA5 1420 aa14.03□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms