RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeast

Gene MSS18, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS18	YPR134W	MED7	Q08278	222 aa		5.02	□□□□□ -1.61
MSS18	YPR134W	TY1A-NL1	Q12391	440 aa	Known RBP	5.02	□□□□□ -1.61
MSS18	YPR134W	CHS2	P14180	963 aa		5.01	□□□□□ -1.61
MSS18	YPR134W	RGD2	P43556	714 aa		5.01	□□□□□ -1.61
MSS18	YPR134W	INP52	P50942	1183 aa		5.01	□□□□□ -1.61
MSS18	YPR134W	SPO71	Q03868	1245 aa		5.01	□□□□□ -1.61
MSS18	YPR134W	MAE1	P36013	669 aa	Known RBP	5	□□□□□ -1.61
MSS18	YPR134W	IRS4	P36115	615 aa	Known RBP	5	□□□□□ -1.61
MSS18	YPR134W	PAN5	P38787	379 aa		5	□□□□□ -1.61
MSS18	YPR134W	ALD3	P54114	506 aa		5	□□□□□ -1.61
MSS18	YPR134W	TRP3	P00937	484 aa		4.99	□□□□□ -1.61
MSS18	YPR134W	NAM7	P30771	971 aa	Known RBP	4.99	□□□□□ -1.61
MSS18	YPR134W	AKR1	P39010	764 aa		4.99	□□□□□ -1.61
MSS18	YPR134W	PSY2	P40164	858 aa		4.99	□□□□□ -1.61
MSS18	YPR134W	RPL34A	P87262	121 aa	Predicted RBP	4.99	□□□□□ -1.61
MSS18	YPR134W	SUB2	Q07478	446 aa	Known RBP	4.99	□□□□□ -1.61
MSS18	YPR134W	YLR122C	Q12312	125 aa		4.99	□□□□□ -1.61
MSS18	YPR134W	BOI1	P38041	980 aa	Known RBP	4.98	□□□□□ -1.61
MSS18	YPR134W	POL5	P39985	1022 aa	Known RBP	4.98	□□□□□ -1.61
MSS18	YPR134W	NEO1	P40527	1151 aa		4.97	□□□□□ -1.61
MSS18	YPR134W	FAR11	P53917	953 aa		4.97	□□□□□ -1.61
MSS18	YPR134W	REC8	Q12188	680 aa		4.97	□□□□□ -1.61
MSS18	YPR134W	TIF6	Q12522	245 aa	Known RBP	4.97	□□□□□ -1.61
MSS18	YPR134W	RPB10	P22139	70 aa		4.96	□□□□□ -1.62
MSS18	YPR134W	KTR2	P33550	425 aa		4.96	□□□□□ -1.62
MSS18	YPR134W	TFA2	P36145	328 aa		4.96	□□□□□ -1.62
MSS18	YPR134W	YKR073C	P36153	106 aa		4.96	□□□□□ -1.62
MSS18	YPR134W	YGR130C	P53278	816 aa		4.96	□□□□□ -1.62
MSS18	YPR134W	UFD2	P54860	961 aa		4.96	□□□□□ -1.62
MSS18	YPR134W	ELG1	Q12050	791 aa		4.96	□□□□□ -1.62
MSS18	YPR134W	LIP5	P32875	414 aa		4.95	□□□□□ -1.62
MSS18	YPR134W	YJR124C	P47159	448 aa		4.95	□□□□□ -1.62
MSS18	YPR134W	YNR065C	P53751	1116 aa		4.95	□□□□□ -1.62
MSS18	YPR134W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
MSS18	YPR134W	YLL054C	Q12244	843 aa		4.95	□□□□□ -1.62
MSS18	YPR134W	MSB1	P21339	1137 aa	Known RBP	4.94	□□□□□ -1.62
MSS18	YPR134W	TOS1	P38288	455 aa		4.94	□□□□□ -1.62
MSS18	YPR134W	BOL3	P39724	118 aa		4.94	□□□□□ -1.62
MSS18	YPR134W	FET4	P40988	552 aa		4.94	□□□□□ -1.62
MSS18	YPR134W	SPO74	P45819	413 aa		4.94	□□□□□ -1.62
MSS18	YPR134W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
MSS18	YPR134W	ECM2	P38241	364 aa	Known RBP	4.93	□□□□□ -1.62
MSS18	YPR134W	IRC24	P40580	263 aa		4.93	□□□□□ -1.62
MSS18	YPR134W	NCE103	P53615	221 aa		4.93	□□□□□ -1.62
MSS18	YPR134W	KAR5	Q04746	504 aa		4.93	□□□□□ -1.62
MSS18	YPR134W	GLO4	Q12320	285 aa		4.93	□□□□□ -1.62
MSS18	YPR134W	HVG1	P0CE11	249 aa		4.92	□□□□□ -1.62
MSS18	YPR134W	PYC2	P32327	1180 aa	Known RBP	4.92	□□□□□ -1.62
MSS18	YPR134W	HAS1	Q03532	505 aa	Known RBP	4.92	□□□□□ -1.62
MSS18	YPR134W	CYC7	P00045	113 aa		4.91	□□□□□ -1.62
MSS18	YPR134W	AVT1	P47082	602 aa		4.91	□□□□□ -1.62
MSS18	YPR134W	RSC4	Q02206	625 aa		4.91	□□□□□ -1.62
MSS18	YPR134W	GIC2	Q06648	383 aa		4.91	□□□□□ -1.62
MSS18	YPR134W	YOR223W	Q12015	292 aa		4.91	□□□□□ -1.62
MSS18	YPR134W	NSI1	Q12457	570 aa		4.91	□□□□□ -1.62
MSS18	YPR134W	SSA1	P10591	642 aa	Known RBP	4.9	□□□□□ -1.63
MSS18	YPR134W	GLO3	P38682	493 aa	Known RBP	4.9	□□□□□ -1.63
MSS18	YPR134W	ACF4	P47129	309 aa		4.9	□□□□□ -1.63
MSS18	YPR134W	ATG1	P53104	897 aa		4.9	□□□□□ -1.63
MSS18	YPR134W	BRE4	Q07660	1125 aa		4.9	□□□□□ -1.63
MSS18	YPR134W	ERS1	P17261	260 aa		4.89	□□□□□ -1.63
MSS18	YPR134W	QDR1	P40475	563 aa		4.89	□□□□□ -1.63
MSS18	YPR134W	CTH1	P47976	325 aa		4.89	□□□□□ -1.63
MSS18	YPR134W	KIP3	P53086	805 aa	Known RBP	4.89	□□□□□ -1.63
MSS18	YPR134W	YMR074C	Q04773	145 aa		4.89	□□□□□ -1.63
MSS18	YPR134W	YOR059C	Q08448	450 aa	Known RBP	4.89	□□□□□ -1.63
MSS18	YPR134W	GCV1	P48015	400 aa		4.88	□□□□□ -1.63
MSS18	YPR134W	MMM1	P41800	426 aa		4.87	□□□□□ -1.63
MSS18	YPR134W	MAG2	Q06436	670 aa	Known RBP	4.87	□□□□□ -1.63
MSS18	YPR134W	YIG1	Q08956	461 aa		4.87	□□□□□ -1.63
MSS18	YPR134W	CIT3	P43635	486 aa		4.86	□□□□□ -1.63
MSS18	YPR134W	YNL011C	P53980	444 aa		4.86	□□□□□ -1.63
MSS18	YPR134W	TRS120	Q04183	1289 aa		4.86	□□□□□ -1.63
MSS18	YPR134W	BSC2	Q05611	235 aa		4.86	□□□□□ -1.63
MSS18	YPR134W	AOS1	Q06624	347 aa		4.86	□□□□□ -1.63
MSS18	YPR134W	NPR1	P22211	790 aa		4.85	□□□□□ -1.63
MSS18	YPR134W	CTR9	P89105	1077 aa		4.85	□□□□□ -1.63
MSS18	YPR134W	CDC55	Q00362	526 aa		4.85	□□□□□ -1.63
MSS18	YPR134W	MSH6	Q03834	1242 aa		4.85	□□□□□ -1.63
MSS18	YPR134W	HTS1	P07263	546 aa	Known RBP	4.84	□□□□□ -1.63
MSS18	YPR134W	CDC3	P32457	520 aa	Known RBP	4.84	□□□□□ -1.63
MSS18	YPR134W	ELM1	P32801	640 aa		4.84	□□□□□ -1.63
MSS18	YPR134W	DOT1	Q04089	582 aa	Known RBP	4.84	□□□□□ -1.63
MSS18	YPR134W	PMT7	Q06644	662 aa		4.84	□□□□□ -1.63
MSS18	YPR134W	PRP5	P21372	849 aa	Predicted RBP	4.83	□□□□□ -1.64
MSS18	YPR134W	RIM11	P38615	370 aa		4.83	□□□□□ -1.64
MSS18	YPR134W	YHL008C	P38750	627 aa		4.83	□□□□□ -1.64
MSS18	YPR134W	SDH1	Q00711	640 aa		4.83	□□□□□ -1.64
MSS18	YPR134W	MEC3	Q02574	474 aa		4.83	□□□□□ -1.64
MSS18	YPR134W	CMR1	Q12510	522 aa	Known RBP	4.83	□□□□□ -1.64
MSS18	YPR134W	GPT2	P36148	743 aa		4.82	□□□□□ -1.64
MSS18	YPR134W	ARL1	P38116	183 aa	Known RBP	4.82	□□□□□ -1.64
MSS18	YPR134W	UTP22	P53254	1237 aa	Predicted RBP	4.82	□□□□□ -1.64
MSS18	YPR134W	SHU2	P38957	223 aa		4.81	□□□□□ -1.64
MSS18	YPR134W	COB	P00163	385 aa		4.8	□□□□□ -1.64
MSS18	YPR134W	FLP1	P03870	423 aa		4.8	□□□□□ -1.64
MSS18	YPR134W	WHI3	P34761	661 aa	Known RBP	4.8	□□□□□ -1.64
MSS18	YPR134W	GEF1	P37020	779 aa		4.8	□□□□□ -1.64
MSS18	YPR134W	SEA4	P38164	1038 aa		4.8	□□□□□ -1.64
MSS18	YPR134W	RVS167	P39743	482 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms