RNA–Protein interactions for RNA: YPR030W

CSR2, Transcript of Nuclear ubiquitin protein ligase binding protein, yeastyeast

Gene CSR2, Length 3,366 nt, Biotype protein coding, Subcellular localisation Cellular bud, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSR2YPR030W GAL11P19659 1081 aa3.55□□□□□ -1.84
CSR2YPR030W PPH3P32345 308 aa3.55□□□□□ -1.84
CSR2YPR030W NIP1P32497 812 aaKnown RBP3.55□□□□□ -1.84
CSR2YPR030W LIN1P38852 340 aaPredicted RBP3.55□□□□□ -1.84
CSR2YPR030W POL31P46957 487 aa3.55□□□□□ -1.84
CSR2YPR030W RCM1P53972 490 aa3.55□□□□□ -1.84
CSR2YPR030W DNM1P54861 757 aa3.55□□□□□ -1.84
CSR2YPR030W EIS1Q05050 843 aaKnown RBP3.55□□□□□ -1.84
CSR2YPR030W DPL1Q05567 589 aa3.55□□□□□ -1.84
CSR2YPR030W PGI1P12709 554 aaKnown RBP3.54□□□□□ -1.84
CSR2YPR030W DPH5P32469 300 aaPredicted RBP3.54□□□□□ -1.84
CSR2YPR030W CNS1P33313 385 aa3.54□□□□□ -1.84
CSR2YPR030W SPC42P36094 363 aa3.54□□□□□ -1.84
CSR2YPR030W RFC5P38251 354 aa3.54□□□□□ -1.84
CSR2YPR030W YER130CP39959 443 aa3.54□□□□□ -1.84
CSR2YPR030W HOS4P40480 1083 aa3.54□□□□□ -1.84
CSR2YPR030W GPD2P41911 440 aaKnown RBP3.54□□□□□ -1.84
CSR2YPR030W CAF130P53280 1122 aaPredicted RBP3.54□□□□□ -1.84
CSR2YPR030W YDR338CQ05497 695 aa3.54□□□□□ -1.84
CSR2YPR030W SGD1Q06132 899 aa3.54□□□□□ -1.84
CSR2YPR030W BRE1Q07457 700 aaKnown RBP3.54□□□□□ -1.84
CSR2YPR030W APL4Q12028 832 aa3.54□□□□□ -1.84
CSR2YPR030W RAD5P32849 1169 aaPredicted RBP3.54□□□□□ -1.84
CSR2YPR030W ECM21P38167 1117 aaKnown RBP3.54□□□□□ -1.84
CSR2YPR030W GDT1P38301 280 aaPredicted RBP3.54□□□□□ -1.84
CSR2YPR030W SPT8P38915 602 aa3.54□□□□□ -1.84
CSR2YPR030W ILM1P47155 203 aa3.54□□□□□ -1.84
CSR2YPR030W CTF18P49956 741 aa3.54□□□□□ -1.84
CSR2YPR030W PAP2P53632 584 aaKnown RBP3.54□□□□□ -1.84
CSR2YPR030W CAB1Q04430 367 aa3.54□□□□□ -1.84
CSR2YPR030W SFH1Q06168 426 aa3.54□□□□□ -1.84
CSR2YPR030W AOS1Q06624 347 aa3.54□□□□□ -1.84
CSR2YPR030W PDB1P32473 366 aaKnown RBP3.54□□□□□ -1.84
CSR2YPR030W RAD24P32641 659 aa3.54□□□□□ -1.84
CSR2YPR030W MFT1P33441 392 aaKnown RBP3.54□□□□□ -1.84
CSR2YPR030W MCX1P38323 520 aaPredicted RBP3.54□□□□□ -1.84
CSR2YPR030W TPS3P38426 1054 aaKnown RBP3.54□□□□□ -1.84
CSR2YPR030W SSP1P38871 571 aa3.54□□□□□ -1.84
CSR2YPR030W RTS3P53289 263 aa3.54□□□□□ -1.84
CSR2YPR030W ATG23Q06671 453 aa3.54□□□□□ -1.84
CSR2YPR030W CMS1Q07897 291 aaKnown RBP3.54□□□□□ -1.84
CSR2YPR030W APL5Q08951 932 aaKnown RBP3.54□□□□□ -1.84
CSR2YPR030W DAL7P21826 554 aa3.53□□□□□ -1.84
CSR2YPR030W CPS1P27614 576 aa3.53□□□□□ -1.84
CSR2YPR030W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
CSR2YPR030W APT1P49435 187 aaKnown RBP3.53□□□□□ -1.84
CSR2YPR030W SUB1P54000 292 aaKnown RBP3.53□□□□□ -1.84
CSR2YPR030W SEC5P89102 971 aa3.53□□□□□ -1.84
CSR2YPR030W VPS38Q05919 439 aa3.53□□□□□ -1.84
CSR2YPR030W MAG2Q06436 670 aaKnown RBP3.53□□□□□ -1.84
CSR2YPR030W YOL057WQ08225 711 aa3.53□□□□□ -1.84
CSR2YPR030W CTI6Q08923 506 aa3.53□□□□□ -1.84
CSR2YPR030W DCS2Q12123 353 aa3.53□□□□□ -1.84
CSR2YPR030W BNI1P41832 1953 aa3.53□□□□□ -1.84
CSR2YPR030W KRS1P15180 591 aaKnown RBP3.53□□□□□ -1.84
CSR2YPR030W PSO2P30620 661 aa3.53□□□□□ -1.84
CSR2YPR030W ASF1P32447 279 aa3.53□□□□□ -1.84
CSR2YPR030W SRL3P36167 246 aa3.53□□□□□ -1.84
CSR2YPR030W MRX1P40050 688 aa3.53□□□□□ -1.84
CSR2YPR030W FYV10P40492 516 aa3.53□□□□□ -1.84
CSR2YPR030W MDJ2P42834 146 aa3.53□□□□□ -1.84
CSR2YPR030W POB3Q04636 552 aaKnown RBP3.53□□□□□ -1.84
CSR2YPR030W NEW1Q08972 1196 aaKnown RBP3.53□□□□□ -1.84
CSR2YPR030W OSH2Q12451 1283 aa3.53□□□□□ -1.84
CSR2YPR030W COQ4O13525 335 aa3.52□□□□□ -1.85
CSR2YPR030W KCC4P25389 1037 aa3.52□□□□□ -1.85
CSR2YPR030W HXT1P32465 570 aa3.52□□□□□ -1.85
CSR2YPR030W EFM2P38347 419 aa3.52□□□□□ -1.85
CSR2YPR030W EFM4P40516 257 aa3.52□□□□□ -1.85
CSR2YPR030W RBA50Q04418 439 aa3.52□□□□□ -1.85
CSR2YPR030W YSH1Q06224 779 aaPredicted RBP3.52□□□□□ -1.85
CSR2YPR030W SMC6Q12749 1114 aa3.52□□□□□ -1.85
CSR2YPR030W PRE10P21242 288 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
CSR2YPR030W MCM3P24279 971 aaKnown RBP3.52□□□□□ -1.85
CSR2YPR030W RPC82P32349 654 aa3.52□□□□□ -1.85
CSR2YPR030W HEL1P36113 551 aa3.52□□□□□ -1.85
CSR2YPR030W PAM1P37304 830 aaKnown RBP3.52□□□□□ -1.85
CSR2YPR030W PCH2P38126 564 aa3.52□□□□□ -1.85
CSR2YPR030W VID30P53076 958 aa3.52□□□□□ -1.85
CSR2YPR030W YOR389WQ08912 624 aa3.52□□□□□ -1.85
CSR2YPR030W TOM70P07213 617 aaKnown RBP3.52□□□□□ -1.85
CSR2YPR030W PIF1P07271 859 aa3.52□□□□□ -1.85
CSR2YPR030W RPB2P08518 1224 aaKnown RBP3.52□□□□□ -1.85
CSR2YPR030W TAL1P15019 335 aaKnown RBP3.52□□□□□ -1.85
CSR2YPR030W UGA3P26370 528 aa3.52□□□□□ -1.85
CSR2YPR030W YME2P32843 850 aa3.52□□□□□ -1.85
CSR2YPR030W SSF1P38789 453 aaPredicted RBP3.52□□□□□ -1.85
CSR2YPR030W BEM4P39011 633 aa3.52□□□□□ -1.85
CSR2YPR030W MIC19P43594 170 aa3.52□□□□□ -1.85
CSR2YPR030W RSC8P43609 557 aaKnown RBP3.52□□□□□ -1.85
CSR2YPR030W OSW7P43611 510 aa3.52□□□□□ -1.85
CSR2YPR030W TRS85P46944 698 aa3.52□□□□□ -1.85
CSR2YPR030W CUE3P53137 624 aaKnown RBP3.52□□□□□ -1.85
CSR2YPR030W DOS2P54858 310 aa3.52□□□□□ -1.85
CSR2YPR030W SRC1Q03707 834 aa3.52□□□□□ -1.85
CSR2YPR030W RRB1Q04225 511 aaKnown RBP3.52□□□□□ -1.85
CSR2YPR030W RSA3Q05942 220 aaKnown RBP3.52□□□□□ -1.85
CSR2YPR030W YLR177WQ06251 628 aa3.52□□□□□ -1.85
CSR2YPR030W CBP3P21560 335 aa3.51□□□□□ -1.85
CSR2YPR030W SPO11P23179 398 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms