RNA–Protein interactions for RNA: YOR108W

LEU9, Transcript of Alpha-isopropylmalate synthase II (2-isopropylmalate synthase), yeast

Gene LEU9, Length 1,815 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEU9	YOR108W	GRX6	Q12438	231 aa		10.84	□□□□□ -0.67
LEU9	YOR108W	ICL1	P28240	557 aa	Predicted RBP	10.83	□□□□□ -0.68
LEU9	YOR108W	MRD1	Q06106	887 aa	Known RBP	10.83	□□□□□ -0.68
LEU9	YOR108W	WRS1	Q12109	432 aa	Known RBP	10.83	□□□□□ -0.68
LEU9	YOR108W	PIP2	P52960	996 aa		10.82	□□□□□ -0.68
LEU9	YOR108W	RPS15	Q01855	142 aa	Known RBP	10.82	□□□□□ -0.68
LEU9	YOR108W	APC11	Q12157	165 aa		10.82	□□□□□ -0.68
LEU9	YOR108W	CTT1	P06115	562 aa		10.81	□□□□□ -0.68
LEU9	YOR108W	KEX1	P09620	729 aa		10.81	□□□□□ -0.68
LEU9	YOR108W	YKU70	P32807	602 aa		10.81	□□□□□ -0.68
LEU9	YOR108W	TIF4632	P39936	914 aa	Known RBP	10.81	□□□□□ -0.68
LEU9	YOR108W	RSM25	P40496	264 aa		10.81	□□□□□ -0.68
LEU9	YOR108W	HYR1	P40581	163 aa	Known RBP	10.81	□□□□□ -0.68
LEU9	YOR108W	PRP42	Q03776	544 aa	Known RBP	10.81	□□□□□ -0.68
LEU9	YOR108W	FAS2	P19097	1887 aa	Known RBP	10.81	□□□□□ -0.68
LEU9	YOR108W	KNS1	P32350	737 aa	Predicted RBP	10.81	□□□□□ -0.68
LEU9	YOR108W	RFC5	P38251	354 aa		10.81	□□□□□ -0.68
LEU9	YOR108W	RVS167	P39743	482 aa	Known RBP	10.81	□□□□□ -0.68
LEU9	YOR108W	ECM23	Q02710	187 aa		10.81	□□□□□ -0.68
LEU9	YOR108W	GAS5	Q08193	484 aa		10.81	□□□□□ -0.68
LEU9	YOR108W	HCA4	P20448	770 aa	Known RBP	10.8	□□□□□ -0.68
LEU9	YOR108W	KIN4	Q01919	800 aa		10.8	□□□□□ -0.68
LEU9	YOR108W	YPL150W	Q12152	901 aa		10.8	□□□□□ -0.68
LEU9	YOR108W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	10.79	□□□□□ -0.68	not detected
LEU9	YOR108W	RDS1	P25611	832 aa		10.79	□□□□□ -0.68
LEU9	YOR108W	DID4	P36108	232 aa		10.79	□□□□□ -0.68
LEU9	YOR108W	HDA1	P53973	706 aa		10.79	□□□□□ -0.68
LEU9	YOR108W	FIG2	P25653	1609 aa		10.79	□□□□□ -0.68
LEU9	YOR108W	TOP1	P04786	769 aa		10.79	□□□□□ -0.68
LEU9	YOR108W	ARG82	P07250	355 aa		10.79	□□□□□ -0.68
LEU9	YOR108W	SNF3	P10870	884 aa		10.79	□□□□□ -0.68
LEU9	YOR108W	MAL33	P38157	468 aa		10.79	□□□□□ -0.68
LEU9	YOR108W	RTS1	P38903	757 aa		10.79	□□□□□ -0.68
LEU9	YOR108W	PUS6	P53294	404 aa		10.79	□□□□□ -0.68
LEU9	YOR108W	YLR407W	Q06070	228 aa		10.79	□□□□□ -0.68
LEU9	YOR108W	MBR1	P23493	339 aa		10.78	□□□□□ -0.68
LEU9	YOR108W	RPN12	P32496	274 aa		10.78	□□□□□ -0.68
LEU9	YOR108W	ANP1	P32629	500 aa		10.78	□□□□□ -0.68
LEU9	YOR108W	AKR1	P39010	764 aa		10.78	□□□□□ -0.68
LEU9	YOR108W	YER156C	P40093	338 aa	Known RBP	10.78	□□□□□ -0.68
LEU9	YOR108W	APL6	P46682	809 aa		10.78	□□□□□ -0.68
LEU9	YOR108W	PTK2	P47116	818 aa	Known RBP	10.78	□□□□□ -0.68
LEU9	YOR108W	HSP82	P02829	709 aa	Known RBP	10.77	□□□□□ -0.68
LEU9	YOR108W	RPS7A	P26786	190 aa	Known RBP	10.77	□□□□□ -0.68
LEU9	YOR108W	CCT5	P40413	562 aa	Known RBP	10.77	□□□□□ -0.68
LEU9	YOR108W	RSC1	P53236	928 aa		10.77	□□□□□ -0.68
LEU9	YOR108W	UBP10	P53874	792 aa	Predicted RBP	10.77	□□□□□ -0.68
LEU9	YOR108W	YPL260W	Q08977	551 aa		10.77	□□□□□ -0.68
LEU9	YOR108W	YHL050C	P38721	697 aa		10.77	□□□□□ -0.69
LEU9	YOR108W	NSG2	P53898	299 aa		10.77	□□□□□ -0.69
LEU9	YOR108W	DPL1	Q05567	589 aa		10.77	□□□□□ -0.69
LEU9	YOR108W	TFC6	Q06339	672 aa		10.77	□□□□□ -0.69
LEU9	YOR108W	RRG1	Q12167	365 aa	Predicted RBP	10.77	□□□□□ -0.69
LEU9	YOR108W	MPH3	P0CE00	602 aa		10.76	□□□□□ -0.69
LEU9	YOR108W	FRS2	P15625	503 aa	Known RBP	10.76	□□□□□ -0.69
LEU9	YOR108W	PIL1	P53252	339 aa	Known RBP	10.76	□□□□□ -0.69
LEU9	YOR108W	ISW2	Q08773	1120 aa		10.76	□□□□□ -0.69
LEU9	YOR108W	AIM44	Q99299	758 aa		10.76	□□□□□ -0.69
LEU9	YOR108W	DIT2	P21595	489 aa		10.75	□□□□□ -0.69
LEU9	YOR108W	VID27	P40157	782 aa		10.75	□□□□□ -0.69
LEU9	YOR108W	RIT1	P23796	513 aa		10.74	□□□□□ -0.69
LEU9	YOR108W	AFG2	P32794	780 aa		10.74	□□□□□ -0.69
LEU9	YOR108W	ELM1	P32801	640 aa		10.74	□□□□□ -0.69
LEU9	YOR108W	MYO3	P36006	1272 aa		10.74	□□□□□ -0.69
LEU9	YOR108W	RPN10	P38886	268 aa	Known RBP	10.74	□□□□□ -0.69
LEU9	YOR108W	MSH4	P40965	878 aa	Predicted RBP	10.74	□□□□□ -0.69
LEU9	YOR108W	LCD1	Q04377	747 aa		10.74	□□□□□ -0.69
LEU9	YOR108W	KEL3	Q08979	651 aa	Predicted RBP	10.74	□□□□□ -0.69
LEU9	YOR108W	RAD61	Q99359	647 aa		10.74	□□□□□ -0.69
LEU9	YOR108W	RKM3	P38222	552 aa		10.72	□□□□□ -0.69
LEU9	YOR108W	KRE33	P53914	1056 aa	Known RBP	10.72	□□□□□ -0.69
LEU9	YOR108W	SEN54	Q02825	467 aa	Predicted RBP	10.72	□□□□□ -0.69
LEU9	YOR108W	ACK1	Q07622	623 aa	Predicted RBP	10.72	□□□□□ -0.69
LEU9	YOR108W	ETT1	Q08421	412 aa	Known RBP	10.72	□□□□□ -0.69
LEU9	YOR108W	TRS33	Q99394	268 aa		10.72	□□□□□ -0.69
LEU9	YOR108W	HKR1	P41809	1802 aa		10.72	□□□□□ -0.69
LEU9	YOR108W	MAK31	P23059	88 aa		10.72	□□□□□ -0.69
LEU9	YOR108W	SWI4	P25302	1093 aa	Known RBP	10.72	□□□□□ -0.69
LEU9	YOR108W	PRO3	P32263	286 aa	Known RBP	10.72	□□□□□ -0.69
LEU9	YOR108W	BMH2	P34730	273 aa	Known RBP	10.72	□□□□□ -0.69
LEU9	YOR108W	MAL31	P38156	614 aa		10.72	□□□□□ -0.69
LEU9	YOR108W	CSM2	P40465	213 aa		10.72	□□□□□ -0.69
LEU9	YOR108W	PGI1	P12709	554 aa	Known RBP	10.71	□□□□□ -0.69
LEU9	YOR108W	VPS8	P39702	1274 aa		10.71	□□□□□ -0.69
LEU9	YOR108W	ALG2	P43636	503 aa		10.71	□□□□□ -0.69
LEU9	YOR108W	VMS1	Q04311	632 aa	Known RBP	10.71	□□□□□ -0.69
LEU9	YOR108W	DIP2	Q12220	943 aa	Predicted RBP	10.71	□□□□□ -0.69
LEU9	YOR108W	YOR111W	Q99210	232 aa		10.71	□□□□□ -0.69
LEU9	YOR108W	RGP1	P16664	663 aa		10.7	□□□□□ -0.7
LEU9	YOR108W	CBP3	P21560	335 aa		10.7	□□□□□ -0.7
LEU9	YOR108W	DDP1	Q99321	188 aa	Known RBP	10.7	□□□□□ -0.7
LEU9	YOR108W	SHC1	P39000	512 aa		10.7	□□□□□ -0.7
LEU9	YOR108W	FLO11	P08640	1367 aa		10.7	□□□□□ -0.7
LEU9	YOR108W	FLO1	P32768	1537 aa		10.69	□□□□□ -0.7
LEU9	YOR108W	ACE2	P21192	770 aa		10.69	□□□□□ -0.7
LEU9	YOR108W	VPS1	P21576	704 aa	Known RBP	10.69	□□□□□ -0.7
LEU9	YOR108W	SGD1	Q06132	899 aa		10.69	□□□□□ -0.7
LEU9	YOR108W	HXK1	P04806	485 aa	Known RBP	10.68	□□□□□ -0.7
LEU9	YOR108W	CDC6	P09119	513 aa		10.68	□□□□□ -0.7
LEU9	YOR108W	NPR3	P38742	1146 aa		10.68	□□□□□ -0.7

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms