RNA–Protein interactions for RNA: YNL112W

DBP2, Transcript of ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP2	YNL112W	UFD2	P54860	961 aa		18.56	■□□□□ 0.56
DBP2	YNL112W	ECM23	Q02710	187 aa		18.56	■□□□□ 0.56
DBP2	YNL112W	APL6	P46682	809 aa		18.56	■□□□□ 0.56
DBP2	YNL112W	FBP26	P32604	452 aa		18.55	■□□□□ 0.56
DBP2	YNL112W	SHC1	P39000	512 aa		18.55	■□□□□ 0.56
DBP2	YNL112W	RPS15	Q01855	142 aa	Known RBP	18.55	■□□□□ 0.56
DBP2	YNL112W	BIK1	P11709	440 aa		18.54	■□□□□ 0.56
DBP2	YNL112W	HRQ1	Q05549	1077 aa		18.53	■□□□□ 0.56
DBP2	YNL112W	MSP1	P28737	362 aa		18.52	■□□□□ 0.56
DBP2	YNL112W	PTK2	P47116	818 aa	Known RBP	18.52	■□□□□ 0.56
DBP2	YNL112W	MRD1	Q06106	887 aa	Known RBP	18.52	■□□□□ 0.55
DBP2	YNL112W	RTS1	P38903	757 aa		18.51	■□□□□ 0.55
DBP2	YNL112W	YKE2	P52553	114 aa		18.51	■□□□□ 0.55
DBP2	YNL112W	MATALPHA2	P0CY08	210 aa		18.5	■□□□□ 0.55
DBP2	YNL112W	HMLALPHA2	P0CY09	210 aa		18.5	■□□□□ 0.55
DBP2	YNL112W	ROX1	P25042	368 aa		18.5	■□□□□ 0.55
DBP2	YNL112W	SNF7	P39929	240 aa	Known RBP	18.5	■□□□□ 0.55
DBP2	YNL112W	EPL1	P43572	832 aa		18.5	■□□□□ 0.55
DBP2	YNL112W	EST2	Q06163	884 aa		18.5	■□□□□ 0.55
DBP2	YNL112W	SQS1	P53866	767 aa	Known RBP	18.49	■□□□□ 0.55
DBP2	YNL112W	ACK1	Q07622	623 aa	Predicted RBP	18.49	■□□□□ 0.55
DBP2	YNL112W	STV1	P37296	890 aa		18.49	■□□□□ 0.55
DBP2	YNL112W	BDH2	P39713	417 aa		18.49	■□□□□ 0.55
DBP2	YNL112W	ATG20	Q07528	640 aa		18.49	■□□□□ 0.55
DBP2	YNL112W	GAP1	P19145	602 aa	Predicted RBP	18.48	■□□□□ 0.55
DBP2	YNL112W	YPL260W	Q08977	551 aa		18.48	■□□□□ 0.55
DBP2	YNL112W	CPA2	P03965	1118 aa	Known RBP	18.47	■□□□□ 0.55
DBP2	YNL112W	ANP1	P32629	500 aa		18.47	■□□□□ 0.55
DBP2	YNL112W	PRX1	P34227	261 aa	Known RBP	18.46	■□□□□ 0.55
DBP2	YNL112W	MYO3	P36006	1272 aa		18.46	■□□□□ 0.55
DBP2	YNL112W	VID27	P40157	782 aa		18.46	■□□□□ 0.55
DBP2	YNL112W	TFC6	Q06339	672 aa		18.45	■□□□□ 0.54
DBP2	YNL112W	PRO3	P32263	286 aa	Known RBP	18.45	■□□□□ 0.54
DBP2	YNL112W	VPS4	P52917	437 aa		18.45	■□□□□ 0.54
DBP2	YNL112W	KEL3	Q08979	651 aa	Predicted RBP	18.45	■□□□□ 0.54
DBP2	YNL112W	YHL017W	P38745	532 aa		18.44	■□□□□ 0.54
DBP2	YNL112W	HST1	P53685	503 aa		18.44	■□□□□ 0.54
DBP2	YNL112W	TRM44	Q02648	567 aa	Known RBP	18.44	■□□□□ 0.54
DBP2	YNL112W	YLR407W	Q06070	228 aa		18.44	■□□□□ 0.54
DBP2	YNL112W	PSK2	Q08217	1101 aa		18.44	■□□□□ 0.54
DBP2	YNL112W	ELG1	Q12050	791 aa		18.44	■□□□□ 0.54
DBP2	YNL112W	RAD61	Q99359	647 aa		18.44	■□□□□ 0.54
DBP2	YNL112W	MSM1	P22438	575 aa		18.43	■□□□□ 0.54
DBP2	YNL112W	AKR1	P39010	764 aa		18.43	■□□□□ 0.54
DBP2	YNL112W	MBR1	P23493	339 aa		18.42	■□□□□ 0.54
DBP2	YNL112W	SIS2	P36024	562 aa		18.42	■□□□□ 0.54
DBP2	YNL112W	HAP5	Q02516	242 aa		18.42	■□□□□ 0.54
DBP2	YNL112W	SEN54	Q02825	467 aa	Predicted RBP	18.42	■□□□□ 0.54
DBP2	YNL112W	RIT1	P23796	513 aa		18.41	■□□□□ 0.54
DBP2	YNL112W	TTI1	P36097	1038 aa		18.41	■□□□□ 0.54
DBP2	YNL112W	YJL171C	P46992	396 aa		18.41	■□□□□ 0.54
DBP2	YNL112W	MTC3	P53077	123 aa		18.41	■□□□□ 0.54
DBP2	YNL112W	YPL150W	Q12152	901 aa		18.41	■□□□□ 0.54
DBP2	YNL112W	UTP7	P40055	554 aa	Known RBP	18.41	■□□□□ 0.54
DBP2	YNL112W	CSM2	P40465	213 aa		18.41	■□□□□ 0.54
DBP2	YNL112W	BUD6	P41697	788 aa		18.41	■□□□□ 0.54
DBP2	YNL112W	CIR1	P42940	261 aa		18.41	■□□□□ 0.54
DBP2	YNL112W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	18.4	■□□□□ 0.54	not detected
DBP2	YNL112W	HCA4	P20448	770 aa	Known RBP	18.4	■□□□□ 0.54
DBP2	YNL112W	PEX14	P53112	341 aa		18.4	■□□□□ 0.54
DBP2	YNL112W	CRF1	Q04930	467 aa		18.39	■□□□□ 0.53
DBP2	YNL112W	RPS9B	P05755	195 aa	Known RBP	18.38	■□□□□ 0.53
DBP2	YNL112W	ARL1	P38116	183 aa	Known RBP	18.38	■□□□□ 0.53
DBP2	YNL112W	RFC5	P38251	354 aa		18.38	■□□□□ 0.53
DBP2	YNL112W	SLI15	P38283	698 aa		18.38	■□□□□ 0.53
DBP2	YNL112W	PEX19	Q07418	342 aa		18.38	■□□□□ 0.53
DBP2	YNL112W	CLC1	P17891	233 aa		18.38	■□□□□ 0.53
DBP2	YNL112W	RDS1	P25611	832 aa		18.37	■□□□□ 0.53
DBP2	YNL112W	MSH4	P40965	878 aa	Predicted RBP	18.37	■□□□□ 0.53
DBP2	YNL112W	FPK1	P53739	893 aa		18.37	■□□□□ 0.53
DBP2	YNL112W	UBP10	P53874	792 aa	Predicted RBP	18.37	■□□□□ 0.53
DBP2	YNL112W	MAK31	P23059	88 aa		18.36	■□□□□ 0.53
DBP2	YNL112W	MPH3	P0CE00	602 aa		18.35	■□□□□ 0.53
DBP2	YNL112W	HYR1	P40581	163 aa	Known RBP	18.35	■□□□□ 0.53
DBP2	YNL112W	YOR111W	Q99210	232 aa		18.35	■□□□□ 0.53
DBP2	YNL112W	MAL33	P38157	468 aa		18.34	■□□□□ 0.53
DBP2	YNL112W	RPN10	P38886	268 aa	Known RBP	18.34	■□□□□ 0.53
DBP2	YNL112W	FET4	P40988	552 aa		18.34	■□□□□ 0.53
DBP2	YNL112W	COG8	Q04632	607 aa		18.34	■□□□□ 0.53
DBP2	YNL112W	ACE2	P21192	770 aa		18.34	■□□□□ 0.53
DBP2	YNL112W	VPS8	P39702	1274 aa		18.34	■□□□□ 0.53
DBP2	YNL112W	MYO5	Q04439	1219 aa	Known RBP	18.34	■□□□□ 0.53
DBP2	YNL112W	PCL8	Q08966	492 aa		18.34	■□□□□ 0.53
DBP2	YNL112W	HSP82	P02829	709 aa	Known RBP	18.33	■□□□□ 0.52
DBP2	YNL112W	HPR1	P17629	752 aa	Known RBP	18.33	■□□□□ 0.52
DBP2	YNL112W	DIT2	P21595	489 aa		18.33	■□□□□ 0.52
DBP2	YNL112W	SWI4	P25302	1093 aa	Known RBP	18.33	■□□□□ 0.52
DBP2	YNL112W	ISW2	Q08773	1120 aa		18.32	■□□□□ 0.52
DBP2	YNL112W	APC11	Q12157	165 aa		18.32	■□□□□ 0.52
DBP2	YNL112W	KEX1	P09620	729 aa		18.31	■□□□□ 0.52
DBP2	YNL112W	GLC3	P32775	704 aa		18.31	■□□□□ 0.52
DBP2	YNL112W	FRS2	P15625	503 aa	Known RBP	18.31	■□□□□ 0.52
DBP2	YNL112W	PRE8	P23639	250 aa		18.31	■□□□□ 0.52
DBP2	YNL112W	ADP1	P25371	1049 aa		18.31	■□□□□ 0.52
DBP2	YNL112W	SSA1	P10591	642 aa	Known RBP	18.3	■□□□□ 0.52
DBP2	YNL112W	MAL31	P38156	614 aa		18.3	■□□□□ 0.52
DBP2	YNL112W	RVS167	P39743	482 aa	Known RBP	18.3	■□□□□ 0.52
DBP2	YNL112W	YGR117C	P53270	476 aa		18.3	■□□□□ 0.52
DBP2	YNL112W	RPT6	Q01939	405 aa	Known RBP	18.3	■□□□□ 0.52
DBP2	YNL112W	YDL124W	Q07551	312 aa	Known RBP	18.3	■□□□□ 0.52

Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms