RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C TOM1Q03280 3268 aa7.54□□□□□ -1.2
SCS7YMR272C SNF3P10870 884 aa7.53□□□□□ -1.2
SCS7YMR272C CST26P38226 397 aa7.53□□□□□ -1.2
SCS7YMR272C PBY1P38254 753 aa7.53□□□□□ -1.2
SCS7YMR272C HAL5P38970 855 aaKnown RBP7.53□□□□□ -1.2
SCS7YMR272C ACA1P39970 489 aa7.53□□□□□ -1.2
SCS7YMR272C YPL260WQ08977 551 aa7.53□□□□□ -1.2
SCS7YMR272C KEL3Q08979 651 aaPredicted RBP7.53□□□□□ -1.2
SCS7YMR272C CFT2Q12102 859 aaPredicted RBP7.53□□□□□ -1.2
SCS7YMR272C KIN1P13185 1064 aa7.52□□□□□ -1.21
SCS7YMR272C PER1P25625 357 aa7.52□□□□□ -1.21
SCS7YMR272C MAC1P35192 417 aa7.52□□□□□ -1.21
SCS7YMR272C YKR018CP36114 725 aa7.52□□□□□ -1.21
SCS7YMR272C ERG7P38604 731 aa7.52□□□□□ -1.21
SCS7YMR272C IRC8P47046 822 aa7.52□□□□□ -1.21
SCS7YMR272C TPM1P17536 199 aaKnown RBP7.51□□□□□ -1.21
SCS7YMR272C CDC60P26637 1090 aaKnown RBP7.51□□□□□ -1.21
SCS7YMR272C KEL1P38853 1164 aaKnown RBP7.51□□□□□ -1.21
SCS7YMR272C SLN1P39928 1220 aaPredicted RBP7.51□□□□□ -1.21
SCS7YMR272C RPN7Q06103 429 aaKnown RBP7.51□□□□□ -1.21
SCS7YMR272C YDL124WQ07551 312 aaKnown RBP7.51□□□□□ -1.21
SCS7YMR272C PPM2Q08282 695 aa7.51□□□□□ -1.21
SCS7YMR272C PAH1P32567 862 aa7.5□□□□□ -1.21
SCS7YMR272C PSF2P40359 213 aa7.5□□□□□ -1.21
SCS7YMR272C PEX29Q03370 554 aa7.5□□□□□ -1.21
SCS7YMR272C MRD1Q06106 887 aaKnown RBP7.5□□□□□ -1.21
SCS7YMR272C BRE1Q07457 700 aaKnown RBP7.5□□□□□ -1.21
SCS7YMR272C DIT2P21595 489 aa7.49□□□□□ -1.21
SCS7YMR272C SLA1P32790 1244 aa7.49□□□□□ -1.21
SCS7YMR272C PRS1P32895 427 aaKnown RBP7.49□□□□□ -1.21
SCS7YMR272C POL32P47110 350 aa7.49□□□□□ -1.21
SCS7YMR272C AI2P03876 854 aa7.48□□□□□ -1.21
SCS7YMR272C NOT3P06102 836 aaKnown RBP7.48□□□□□ -1.21
SCS7YMR272C SIS2P36024 562 aa7.48□□□□□ -1.21
SCS7YMR272C SRS2P12954 1174 aa7.47□□□□□ -1.21
SCS7YMR272C PRE8P23639 250 aa7.47□□□□□ -1.21
SCS7YMR272C SEC20P28791 383 aa7.47□□□□□ -1.21
SCS7YMR272C SPT21P35209 758 aa7.47□□□□□ -1.21
SCS7YMR272C GRX7P38068 203 aa7.47□□□□□ -1.21
SCS7YMR272C ECM21P38167 1117 aaKnown RBP7.47□□□□□ -1.21
SCS7YMR272C RFC1P38630 861 aaKnown RBP7.47□□□□□ -1.21
SCS7YMR272C RTS1P38903 757 aa7.47□□□□□ -1.21
SCS7YMR272C STM1P39015 273 aaKnown RBP7.47□□□□□ -1.21
SCS7YMR272C GPB2P39717 880 aa7.47□□□□□ -1.21
SCS7YMR272C SOL4P53315 255 aa7.47□□□□□ -1.21
SCS7YMR272C CDC19P00549 500 aaKnown RBP7.46□□□□□ -1.22
SCS7YMR272C VMA2P16140 517 aaKnown RBP7.46□□□□□ -1.22
SCS7YMR272C SRM1P21827 482 aa7.46□□□□□ -1.22
SCS7YMR272C OPI1P21957 404 aa7.46□□□□□ -1.22
SCS7YMR272C PKC1P24583 1151 aa7.46□□□□□ -1.22
SCS7YMR272C TOM71P38825 639 aaKnown RBP7.46□□□□□ -1.22
SCS7YMR272C MXR1P40029 184 aa7.46□□□□□ -1.22
SCS7YMR272C MET7Q08645 548 aa7.46□□□□□ -1.22
SCS7YMR272C LAP2Q10740 671 aa7.46□□□□□ -1.22
SCS7YMR272C TAH18Q12181 623 aa7.46□□□□□ -1.22
SCS7YMR272C CLF1Q12309 687 aaPredicted RBP7.46□□□□□ -1.22
SCS7YMR272C LDH1P38139 375 aa7.45□□□□□ -1.22
SCS7YMR272C VPS8P39702 1274 aa7.45□□□□□ -1.22
SCS7YMR272C FAP1P53971 965 aa7.45□□□□□ -1.22
SCS7YMR272C SSF2Q12153 453 aaPredicted RBP7.45□□□□□ -1.22
SCS7YMR272C TUB2P02557 457 aaKnown RBP7.44□□□□□ -1.22
SCS7YMR272C FBP1P09201 348 aa7.44□□□□□ -1.22
SCS7YMR272C KTR1P27810 393 aaKnown RBP7.44□□□□□ -1.22
SCS7YMR272C MET1P36150 593 aa7.44□□□□□ -1.22
SCS7YMR272C YFL040WP43562 540 aa7.44□□□□□ -1.22
SCS7YMR272C ALO1P54783 526 aaKnown RBP7.44□□□□□ -1.22
SCS7YMR272C ICL2Q12031 575 aa7.44□□□□□ -1.22
SCS7YMR272C SPB4P25808 606 aaPredicted RBP7.43□□□□□ -1.22
SCS7YMR272C IXR1P33417 597 aa7.43□□□□□ -1.22
SCS7YMR272C EAR1Q03212 550 aa7.43□□□□□ -1.22
SCS7YMR272C RAD61Q99359 647 aa7.43□□□□□ -1.22
SCS7YMR272C EUG1P32474 517 aa7.42□□□□□ -1.22
SCS7YMR272C ALG2P43636 503 aa7.42□□□□□ -1.22
SCS7YMR272C VPS53P47061 822 aa7.42□□□□□ -1.22
SCS7YMR272C VPS62P53285 467 aa7.42□□□□□ -1.22
SCS7YMR272C ULP1Q02724 621 aa7.42□□□□□ -1.22
SCS7YMR272C FMP30Q02883 468 aa7.42□□□□□ -1.22
SCS7YMR272C CDC16P09798 840 aa7.41□□□□□ -1.22
SCS7YMR272C YDJ1P25491 409 aaKnown RBP7.41□□□□□ -1.22
SCS7YMR272C WHI3P34761 661 aaKnown RBP7.41□□□□□ -1.22
SCS7YMR272C YMR147WP40218 223 aaKnown RBP7.41□□□□□ -1.22
SCS7YMR272C YJL007CP47080 104 aa7.41□□□□□ -1.22
SCS7YMR272C LSB1P53281 241 aa7.41□□□□□ -1.22
SCS7YMR272C FPR4Q06205 392 aaPredicted RBP7.41□□□□□ -1.22
SCS7YMR272C SKG3Q06315 1026 aa7.41□□□□□ -1.22
SCS7YMR272C VAS1P07806 1104 aaKnown RBP7.4□□□□□ -1.22
SCS7YMR272C RGT1P32862 1170 aa7.4□□□□□ -1.22
SCS7YMR272C AVT3P36062 692 aa7.4□□□□□ -1.22
SCS7YMR272C PAM1P37304 830 aaKnown RBP7.4□□□□□ -1.22
SCS7YMR272C TIF4631P39935 952 aaKnown RBP7.4□□□□□ -1.22
SCS7YMR272C VID27P40157 782 aa7.4□□□□□ -1.22
SCS7YMR272C YJR107WP47145 328 aa7.4□□□□□ -1.22
SCS7YMR272C YML037CQ03703 340 aa7.4□□□□□ -1.22
SCS7YMR272C PIB1Q06651 286 aa7.4□□□□□ -1.22
SCS7YMR272C PRE10P21242 288 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
SCS7YMR272C PWP2P25635 923 aaKnown RBP7.39□□□□□ -1.23
SCS7YMR272C SEC8P32855 1065 aa7.39□□□□□ -1.23
SCS7YMR272C VPS45P38932 577 aa7.39□□□□□ -1.23
SCS7YMR272C YGR125WP53273 1036 aa7.39□□□□□ -1.23
SCS7YMR272C ALD6P54115 500 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms