RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C SSA4P22202 642 aaKnown RBP7.26□□□□□ -1.25
VPS20YMR077C RRN6P32786 894 aa7.26□□□□□ -1.25
VPS20YMR077C AKR1P39010 764 aa7.26□□□□□ -1.25
VPS20YMR077C YGR130CP53278 816 aa7.26□□□□□ -1.25
VPS20YMR077C FUS1P11710 512 aa7.25□□□□□ -1.25
VPS20YMR077C AVT1P47082 602 aa7.25□□□□□ -1.25
VPS20YMR077C NAM7P30771 971 aaKnown RBP7.24□□□□□ -1.25
VPS20YMR077C MAE1P36013 669 aaKnown RBP7.24□□□□□ -1.25
VPS20YMR077C SPO74P45819 413 aa7.24□□□□□ -1.25
VPS20YMR077C ALD3P54114 506 aa7.24□□□□□ -1.25
VPS20YMR077C SPO71Q03868 1245 aa7.24□□□□□ -1.25
VPS20YMR077C BRE4Q07660 1125 aa7.24□□□□□ -1.25
VPS20YMR077C POL5P39985 1022 aaKnown RBP7.23□□□□□ -1.25
VPS20YMR077C TFA2P36145 328 aa7.22□□□□□ -1.25
VPS20YMR077C NTA1P40354 457 aa7.22□□□□□ -1.25
VPS20YMR077C RGD2P43556 714 aa7.22□□□□□ -1.25
VPS20YMR077C CTH1P47976 325 aa7.22□□□□□ -1.25
VPS20YMR077C PNP1Q05788 311 aa7.22□□□□□ -1.25
VPS20YMR077C APC11Q12157 165 aa7.22□□□□□ -1.25
VPS20YMR077C CYC7P00045 113 aa7.21□□□□□ -1.26
VPS20YMR077C MSB1P21339 1137 aaKnown RBP7.21□□□□□ -1.26
VPS20YMR077C NCE103P53615 221 aa7.2□□□□□ -1.26
VPS20YMR077C MAG2Q06436 670 aaKnown RBP7.2□□□□□ -1.26
VPS20YMR077C AOS1Q06624 347 aa7.2□□□□□ -1.26
VPS20YMR077C SUT1P53032 299 aaKnown RBP7.19□□□□□ -1.26
VPS20YMR077C ELG1Q12050 791 aa7.19□□□□□ -1.26
VPS20YMR077C SMC1P32908 1225 aa7.18□□□□□ -1.26
VPS20YMR077C YML083CQ04526 418 aa7.18□□□□□ -1.26
VPS20YMR077C ELM1P32801 640 aa7.17□□□□□ -1.26
VPS20YMR077C RAD55P38953 406 aa7.17□□□□□ -1.26
VPS20YMR077C NEO1P40527 1151 aa7.17□□□□□ -1.26
VPS20YMR077C NOB1Q08444 459 aaKnown RBP7.17□□□□□ -1.26
VPS20YMR077C LSO1Q3E827 93 aa7.17□□□□□ -1.26
VPS20YMR077C KTR2P33550 425 aa7.16□□□□□ -1.26
VPS20YMR077C IRS4P36115 615 aaKnown RBP7.16□□□□□ -1.26
VPS20YMR077C BOI1P38041 980 aaKnown RBP7.16□□□□□ -1.26
VPS20YMR077C YJR124CP47159 448 aa7.15□□□□□ -1.26
VPS20YMR077C YNR065CP53751 1116 aa7.15□□□□□ -1.26
VPS20YMR077C TIF6Q12522 245 aaKnown RBP7.15□□□□□ -1.26
VPS20YMR077C HVG1P0CE11 249 aa7.14□□□□□ -1.27
VPS20YMR077C PSY2P40164 858 aa7.14□□□□□ -1.27
VPS20YMR077C FAR11P53917 953 aa7.14□□□□□ -1.27
VPS20YMR077C GIC2Q06648 383 aa7.13□□□□□ -1.27
VPS20YMR077C GLO4Q12320 285 aa7.13□□□□□ -1.27
VPS20YMR077C FUR4P05316 633 aaKnown RBP7.12□□□□□ -1.27
VPS20YMR077C FET4P40988 552 aa7.12□□□□□ -1.27
VPS20YMR077C HAS1Q03532 505 aaKnown RBP7.12□□□□□ -1.27
VPS20YMR077C ERS1P17261 260 aa7.11□□□□□ -1.27
VPS20YMR077C KIP3P53086 805 aaKnown RBP7.11□□□□□ -1.27
VPS20YMR077C RPB10P22139 70 aa7.1□□□□□ -1.27
VPS20YMR077C PYC2P32327 1180 aaKnown RBP7.09□□□□□ -1.27
VPS20YMR077C YOR223WQ12015 292 aa7.08□□□□□ -1.28
VPS20YMR077C YLL054CQ12244 843 aa7.08□□□□□ -1.28
VPS20YMR077C NSI1Q12457 570 aa7.07□□□□□ -1.28
VPS20YMR077C MMM1P41800 426 aa7.05□□□□□ -1.28
VPS20YMR077C YMR074CQ04773 145 aa7.05□□□□□ -1.28
VPS20YMR077C YOR059CQ08448 450 aaKnown RBP7.04□□□□□ -1.28
VPS20YMR077C BOL3P39724 118 aa7.03□□□□□ -1.28
VPS20YMR077C UBP5P39944 805 aa7.03□□□□□ -1.28
VPS20YMR077C CIT3P43635 486 aa7.03□□□□□ -1.28
VPS20YMR077C ECL1P48235 211 aa7.03□□□□□ -1.28
VPS20YMR077C SDH1Q00711 640 aa7.03□□□□□ -1.28
VPS20YMR077C GCV1P48015 400 aa7.02□□□□□ -1.29
VPS20YMR077C GCD1P09032 578 aaPredicted RBP7.01□□□□□ -1.29
VPS20YMR077C NIT1P40447 199 aa7.01□□□□□ -1.29
VPS20YMR077C GPT2P36148 743 aa7□□□□□ -1.29
VPS20YMR077C UFD2P54860 961 aa7□□□□□ -1.29
VPS20YMR077C SEA4P38164 1038 aa6.99□□□□□ -1.29
VPS20YMR077C ECM2P38241 364 aaKnown RBP6.99□□□□□ -1.29
VPS20YMR077C CTR9P89105 1077 aa6.99□□□□□ -1.29
VPS20YMR077C YIG1Q08956 461 aa6.99□□□□□ -1.29
VPS20YMR077C SEG2P34250 1132 aa6.98□□□□□ -1.29
VPS20YMR077C POL12P38121 705 aaPredicted RBP6.98□□□□□ -1.29
VPS20YMR077C RSC4Q02206 625 aa6.98□□□□□ -1.29
VPS20YMR077C DOT1Q04089 582 aaKnown RBP6.98□□□□□ -1.29
VPS20YMR077C RNQ1P25367 405 aa6.97□□□□□ -1.29
VPS20YMR077C WHI3P34761 661 aaKnown RBP6.97□□□□□ -1.29
VPS20YMR077C LRG1P35688 1017 aa6.97□□□□□ -1.29
VPS20YMR077C RCM1P53972 490 aa6.97□□□□□ -1.29
VPS20YMR077C SUB2Q07478 446 aaKnown RBP6.97□□□□□ -1.29
VPS20YMR077C DFG16Q99234 619 aa6.97□□□□□ -1.29
VPS20YMR077C NPR1P22211 790 aa6.96□□□□□ -1.3
VPS20YMR077C HTS1P07263 546 aaKnown RBP6.95□□□□□ -1.3
VPS20YMR077C RIM11P38615 370 aa6.95□□□□□ -1.3
VPS20YMR077C PRP43P53131 767 aaKnown RBP6.95□□□□□ -1.3
VPS20YMR077C PRP5P21372 849 aaPredicted RBP6.94□□□□□ -1.3
VPS20YMR077C MEC3Q02574 474 aa6.94□□□□□ -1.3
VPS20YMR077C CMR1Q12510 522 aaKnown RBP6.94□□□□□ -1.3
VPS20YMR077C GLO3P38682 493 aaKnown RBP6.93□□□□□ -1.3
VPS20YMR077C KAR5Q04746 504 aa6.93□□□□□ -1.3
VPS20YMR077C COBP00163 385 aa6.92□□□□□ -1.3
VPS20YMR077C QDR1P40475 563 aa6.92□□□□□ -1.3
VPS20YMR077C MSH6Q03834 1242 aa6.92□□□□□ -1.3
VPS20YMR077C OYE3P41816 400 aaPredicted RBP6.91□□□□□ -1.3
VPS20YMR077C UTP22P53254 1237 aaPredicted RBP6.91□□□□□ -1.3
VPS20YMR077C RPS4AP0CX35 261 aaKnown RBP6.9□□□□□ -1.3
VPS20YMR077C RPS4BP0CX36 261 aaKnown RBP6.9□□□□□ -1.3
VPS20YMR077C HSP78P33416 811 aa6.9□□□□□ -1.3
VPS20YMR077C ACF4P47129 309 aa6.9□□□□□ -1.3
VPS20YMR077C ATG1P53104 897 aa6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms