RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C YIL165CP40446 119 aa9.16□□□□□ -0.94
ATG17YLR423C FPR4Q06205 392 aaPredicted RBP9.16□□□□□ -0.94
ATG17YLR423C YOL098CQ12496 1037 aa9.16□□□□□ -0.94
ATG17YLR423C PYC2P32327 1180 aaKnown RBP9.14□□□□□ -0.95
ATG17YLR423C ITC1P53125 1264 aa9.14□□□□□ -0.95
ATG17YLR423C MCM5P29496 775 aaKnown RBP9.13□□□□□ -0.95
ATG17YLR423C MRPL16P38064 232 aa9.13□□□□□ -0.95
ATG17YLR423C NUT1P53114 1132 aa9.13□□□□□ -0.95
ATG17YLR423C CTR9P89105 1077 aa9.13□□□□□ -0.95
ATG17YLR423C RVS167P39743 482 aaKnown RBP9.12□□□□□ -0.95
ATG17YLR423C ULP1Q02724 621 aa9.12□□□□□ -0.95
ATG17YLR423C TRK1P12685 1235 aa9.11□□□□□ -0.95
ATG17YLR423C SRP40P32583 406 aaPredicted RBP9.11□□□□□ -0.95
ATG17YLR423C UGA4P32837 571 aa9.11□□□□□ -0.95
ATG17YLR423C SQT1P35184 431 aa9.11□□□□□ -0.95
ATG17YLR423C RSM26P47141 266 aa9.11□□□□□ -0.95
ATG17YLR423C YNR040WP53736 256 aa9.11□□□□□ -0.95
ATG17YLR423C GCR2Q01722 534 aa9.11□□□□□ -0.95
ATG17YLR423C YPL109CQ02981 657 aa9.11□□□□□ -0.95
ATG17YLR423C CDC19P00549 500 aaKnown RBP9.1□□□□□ -0.95
ATG17YLR423C ADI1Q03677 179 aa9.1□□□□□ -0.95
ATG17YLR423C MSH6Q03834 1242 aa9.1□□□□□ -0.95
ATG17YLR423C RSC2Q06488 889 aa9.1□□□□□ -0.95
ATG17YLR423C PMT7Q06644 662 aa9.1□□□□□ -0.95
ATG17YLR423C GDE1Q02979 1223 aa9.09□□□□□ -0.95
ATG17YLR423C COBP00163 385 aa9.08□□□□□ -0.96
ATG17YLR423C PPT1P53043 513 aa9.08□□□□□ -0.96
ATG17YLR423C OPT2Q06593 877 aa9.08□□□□□ -0.96
ATG17YLR423C SSF2Q12153 453 aaPredicted RBP9.08□□□□□ -0.96
ATG17YLR423C OSH7P38755 437 aa9.07□□□□□ -0.96
ATG17YLR423C BRE2P43132 505 aa9.07□□□□□ -0.96
ATG17YLR423C YJL049WP47048 450 aa9.07□□□□□ -0.96
ATG17YLR423C CDC34P14682 295 aa9.06□□□□□ -0.96
ATG17YLR423C YKL091CP33324 310 aaKnown RBP9.05□□□□□ -0.96
ATG17YLR423C YER156CP40093 338 aaKnown RBP9.05□□□□□ -0.96
ATG17YLR423C YJL181WP46987 611 aa9.05□□□□□ -0.96
ATG17YLR423C SCW11P53189 542 aa9.05□□□□□ -0.96
ATG17YLR423C DUR3P33413 735 aa9.04□□□□□ -0.96
ATG17YLR423C RAD27P26793 382 aa9.03□□□□□ -0.96
ATG17YLR423C GLY1P37303 387 aaKnown RBP9.03□□□□□ -0.96
ATG17YLR423C BRN1P38170 754 aa9.03□□□□□ -0.96
ATG17YLR423C FAA4P47912 694 aaKnown RBP9.03□□□□□ -0.96
ATG17YLR423C YAF9P53930 226 aa9.03□□□□□ -0.96
ATG17YLR423C HEH2Q03281 663 aa9.03□□□□□ -0.96
ATG17YLR423C MRL1Q06815 381 aa9.03□□□□□ -0.96
ATG17YLR423C FUS1P11710 512 aa9.02□□□□□ -0.97
ATG17YLR423C SHU2P38957 223 aa9.02□□□□□ -0.97
ATG17YLR423C PIC2P40035 300 aa9.02□□□□□ -0.97
ATG17YLR423C PEX13P80667 386 aa9.02□□□□□ -0.97
ATG17YLR423C RTT10Q08924 1013 aa9.02□□□□□ -0.97
ATG17YLR423C GCR1P07261 785 aa9.01□□□□□ -0.97
ATG17YLR423C IDI1P15496 288 aa9.01□□□□□ -0.97
ATG17YLR423C PRI2P20457 528 aa9.01□□□□□ -0.97
ATG17YLR423C XKS1P42826 600 aa9.01□□□□□ -0.97
ATG17YLR423C OSW7P43611 510 aa9.01□□□□□ -0.97
ATG17YLR423C SAP155P43612 1002 aa9.01□□□□□ -0.97
ATG17YLR423C YMR265CQ03508 461 aaKnown RBP9.01□□□□□ -0.97
ATG17YLR423C CDC53Q12018 815 aaKnown RBP9.01□□□□□ -0.97
ATG17YLR423C YOR131CQ12486 218 aa9.01□□□□□ -0.97
ATG17YLR423C TMA46Q12000 345 aaKnown RBP9□□□□□ -0.97
ATG17YLR423C NPR1P22211 790 aa8.99□□□□□ -0.97
ATG17YLR423C RIM11P38615 370 aa8.99□□□□□ -0.97
ATG17YLR423C NMD2P38798 1089 aaKnown RBP8.99□□□□□ -0.97
ATG17YLR423C PEX28P38848 579 aa8.99□□□□□ -0.97
ATG17YLR423C NSE3Q05541 303 aa8.99□□□□□ -0.97
ATG17YLR423C FAL1Q12099 399 aaKnown RBP8.99□□□□□ -0.97
ATG17YLR423C CMR1Q12510 522 aaKnown RBP8.99□□□□□ -0.97
ATG17YLR423C STI1P15705 589 aaKnown RBP RIP-Chip data8.98□□□□□ -0.97not detected
ATG17YLR423C DIT1P21623 536 aa8.98□□□□□ -0.97
ATG17YLR423C FPS1P23900 669 aa8.98□□□□□ -0.97
ATG17YLR423C GRX1P25373 110 aaKnown RBP8.98□□□□□ -0.97
ATG17YLR423C PPG1P32838 368 aa8.98□□□□□ -0.97
ATG17YLR423C IOC3P43596 787 aa8.98□□□□□ -0.97
ATG17YLR423C NAM8Q00539 523 aaKnown RBP8.98□□□□□ -0.97
ATG17YLR423C TDA5Q06417 326 aaKnown RBP8.98□□□□□ -0.97
ATG17YLR423C TY1A-BLQ12266 440 aa8.98□□□□□ -0.97
ATG17YLR423C INP51P40559 946 aaKnown RBP8.97□□□□□ -0.97
ATG17YLR423C RNH70P53331 553 aa8.97□□□□□ -0.97
ATG17YLR423C KRE33P53914 1056 aaKnown RBP8.97□□□□□ -0.97
ATG17YLR423C OPI10Q08202 246 aa8.97□□□□□ -0.97
ATG17YLR423C YGR053CP53234 283 aa8.96□□□□□ -0.98
ATG17YLR423C GLO4Q12320 285 aa8.96□□□□□ -0.98
ATG17YLR423C MSH3P25336 1018 aa8.95□□□□□ -0.98
ATG17YLR423C YKL077WP36081 392 aa8.95□□□□□ -0.98
ATG17YLR423C DUT1P33317 147 aa8.94□□□□□ -0.98
ATG17YLR423C KRI1P42846 591 aaKnown RBP8.94□□□□□ -0.98
ATG17YLR423C YGL140CP53120 1219 aa8.94□□□□□ -0.98
ATG17YLR423C NOG1Q02892 647 aaKnown RBP8.94□□□□□ -0.98
ATG17YLR423C NAN1Q02931 896 aaKnown RBP8.94□□□□□ -0.98
ATG17YLR423C TAF13P11747 167 aa8.93□□□□□ -0.98
ATG17YLR423C ROG3P43602 733 aa8.93□□□□□ -0.98
ATG17YLR423C YJR124CP47159 448 aa8.93□□□□□ -0.98
ATG17YLR423C CUZ1P53899 274 aa8.93□□□□□ -0.98
ATG17YLR423C ADE12P80210 433 aaKnown RBP8.93□□□□□ -0.98
ATG17YLR423C SEC23P15303 768 aaKnown RBP8.92□□□□□ -0.98
ATG17YLR423C PRP5P21372 849 aaPredicted RBP8.92□□□□□ -0.98
ATG17YLR423C BAS1P22035 811 aa8.92□□□□□ -0.98
ATG17YLR423C FET4P40988 552 aa8.92□□□□□ -0.98
ATG17YLR423C BIO5P53744 561 aaKnown RBP8.92□□□□□ -0.98
ATG17YLR423C RAD4P14736 754 aa8.91□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms