RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS13	YLL040C	MAL33	P38157	468 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	RET3	P53600	189 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	LAM4	P38800	1345 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	RAD24	P32641	659 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	POL31	P46957	487 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	VPS75	P53853	264 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	FUS2	Q05670	677 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	NUR1	Q12066	484 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	ALG1	P16661	449 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	RPL5	P26321	297 aa	Known RBP	2.69	□□□□□ -1.98
VPS13	YLL040C	MAK16	P10962	306 aa	Predicted RBP	2.69	□□□□□ -1.98
VPS13	YLL040C	RPC82	P32349	654 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	YKE2	P52553	114 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	GDE1	Q02979	1223 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	CTI6	Q08923	506 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	HIR1	P32479	840 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	GTT3	P39996	337 aa		2.69	□□□□□ -1.98
VPS13	YLL040C	SNU66	Q12420	587 aa	Predicted RBP	2.69	□□□□□ -1.98
VPS13	YLL040C	YIL177C	P40434	1758 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	YJL225C	P40889	1758 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	OSM1	P21375	501 aa	Known RBP	2.68	□□□□□ -1.98
VPS13	YLL040C	BOP3	P53958	396 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	DCS2	Q12123	353 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	ARG8	P18544	423 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	GSY2	P27472	705 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	RRM3	P38766	723 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	DUR1,2	P32528	1835 aa	Known RBP	2.68	□□□□□ -1.98
VPS13	YLL040C	RPO26	P20435	155 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	KIP2	P28743	706 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	TOS4	Q06266	489 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
VPS13	YLL040C	CPA2	P03965	1118 aa	Known RBP	2.68	□□□□□ -1.98
VPS13	YLL040C	GCG1	P32656	232 aa	Known RBP	2.68	□□□□□ -1.98
VPS13	YLL040C	YJR039W	P47107	1121 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	HXT17	P53631	564 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	EFM4	P40516	257 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	XKS1	P42826	600 aa		2.68	□□□□□ -1.98
VPS13	YLL040C	ALO1	P54783	526 aa	Known RBP	2.68	□□□□□ -1.98
VPS13	YLL040C	SPN1	Q06505	410 aa	Predicted RBP	2.68	□□□□□ -1.98
VPS13	YLL040C	SIP5	P40210	489 aa	Known RBP	2.68	□□□□□ -1.98
VPS13	YLL040C	ENP2	P48234	707 aa	Known RBP	2.68	□□□□□ -1.98
VPS13	YLL040C	GFA1	P14742	717 aa	Known RBP	2.67	□□□□□ -1.98
VPS13	YLL040C	HMI1	Q12039	706 aa		2.67	□□□□□ -1.98
VPS13	YLL040C	HAT1	Q12341	374 aa		2.67	□□□□□ -1.98
VPS13	YLL040C	KTR3	P38130	404 aa	Predicted RBP	2.67	□□□□□ -1.98
VPS13	YLL040C	MAD1	P40957	749 aa		2.67	□□□□□ -1.98
VPS13	YLL040C	UTP22	P53254	1237 aa	Predicted RBP	2.67	□□□□□ -1.98
VPS13	YLL040C	GIN4	Q12263	1142 aa		2.67	□□□□□ -1.98
VPS13	YLL040C	HCA4	P20448	770 aa	Known RBP	2.67	□□□□□ -1.98
VPS13	YLL040C	FPR4	Q06205	392 aa	Predicted RBP	2.67	□□□□□ -1.98
VPS13	YLL040C	YIG1	Q08956	461 aa		2.67	□□□□□ -1.98
VPS13	YLL040C	DIT2	P21595	489 aa		2.67	□□□□□ -1.98
VPS13	YLL040C	SLT2	Q00772	484 aa		2.67	□□□□□ -1.98
VPS13	YLL040C	MSH6	Q03834	1242 aa		2.67	□□□□□ -1.98
VPS13	YLL040C	YOR296W	Q08748	1289 aa		2.67	□□□□□ -1.98
VPS13	YLL040C	PDR1	P12383	1068 aa		2.66	□□□□□ -1.98
VPS13	YLL040C	SWE1	P32944	819 aa		2.66	□□□□□ -1.98
VPS13	YLL040C	CTK3	P46963	296 aa	Predicted RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	NAF1	P53919	492 aa	Known RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	SYH1	Q02875	849 aa	Known RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	TSR3	Q12094	313 aa	Known RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	NUP82	P40368	713 aa		2.66	□□□□□ -1.98
VPS13	YLL040C	DJP1	P40564	432 aa		2.66	□□□□□ -1.98
VPS13	YLL040C	HUL4	P40985	892 aa		2.66	□□□□□ -1.98
VPS13	YLL040C	SEC5	P89102	971 aa		2.66	□□□□□ -1.98
VPS13	YLL040C	MTG1	Q03151	367 aa	Predicted RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	TDA5	Q06417	326 aa	Known RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	BTN2	P53286	410 aa		2.66	□□□□□ -1.98
VPS13	YLL040C	ADE16	P54113	591 aa	Known RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	MSH4	P40965	878 aa	Predicted RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	VID30	P53076	958 aa		2.66	□□□□□ -1.98
VPS13	YLL040C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
VPS13	YLL040C	GFD1	Q04839	188 aa	Known RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	SEC39	Q12745	709 aa		2.66	□□□□□ -1.98
VPS13	YLL040C	RNA1	P11745	407 aa	Known RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	SRO9	P25567	434 aa	Known RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	SMY1	P32364	656 aa	Known RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	EUG1	P32474	517 aa		2.66	□□□□□ -1.98
VPS13	YLL040C	LIN1	P38852	340 aa	Predicted RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	VTC2	P43585	828 aa		2.66	□□□□□ -1.98
VPS13	YLL040C	FRS2	P15625	503 aa	Known RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	CCT3	P39077	534 aa	Known RBP	2.66	□□□□□ -1.98
VPS13	YLL040C	GPA1	P08539	472 aa		2.65	□□□□□ -1.98
VPS13	YLL040C	MYO3	P36006	1272 aa		2.65	□□□□□ -1.98
VPS13	YLL040C	FTH1	P38310	465 aa		2.65	□□□□□ -1.98
VPS13	YLL040C	GLO3	P38682	493 aa	Known RBP	2.65	□□□□□ -1.98
VPS13	YLL040C	RTT107	P38850	1070 aa		2.65	□□□□□ -1.98
VPS13	YLL040C	PMC1	P38929	1173 aa	Predicted RBP	2.65	□□□□□ -1.98
VPS13	YLL040C	WAR1	Q03631	944 aa		2.65	□□□□□ -1.98
VPS13	YLL040C	TIP41	Q12199	356 aa		2.65	□□□□□ -1.98
VPS13	YLL040C	RUD3	Q12234	484 aa	Known RBP	2.65	□□□□□ -1.98
VPS13	YLL040C	PHO87	P25360	923 aa		2.65	□□□□□ -1.98
VPS13	YLL040C	NUP133	P36161	1157 aa		2.65	□□□□□ -1.98
VPS13	YLL040C	STR2	P47164	639 aa		2.65	□□□□□ -1.98
VPS13	YLL040C	YGL138C	P53122	345 aa		2.65	□□□□□ -1.98
VPS13	YLL040C	RAT1	Q02792	1006 aa	Known RBP	2.65	□□□□□ -1.99
VPS13	YLL040C	MYO5	Q04439	1219 aa	Known RBP	2.65	□□□□□ -1.99
VPS13	YLL040C	STE23	Q06010	1027 aa		2.65	□□□□□ -1.99
VPS13	YLL040C	BCK2	P33306	851 aa		2.65	□□□□□ -1.99
VPS13	YLL040C	ERG5	P54781	538 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms