RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W RPL19BP0CX83 189 aaPredicted RBP16.08■□□□□ 0.16
RPN10YHR200W TTI1P36097 1038 aa16.08■□□□□ 0.16
RPN10YHR200W VPS20Q04272 221 aa16.08■□□□□ 0.16
RPN10YHR200W RER2P35196 286 aa16.07■□□□□ 0.16
RPN10YHR200W RPS15Q01855 142 aaKnown RBP16.07■□□□□ 0.16
RPN10YHR200W AAD16Q02895 342 aa16.07■□□□□ 0.16
RPN10YHR200W EST2Q06163 884 aa16.06■□□□□ 0.16
RPN10YHR200W PGA3Q12746 312 aaKnown RBP16.06■□□□□ 0.16
RPN10YHR200W BIK1P11709 440 aa16.05■□□□□ 0.16
RPN10YHR200W MSH4P40965 878 aaPredicted RBP16.05■□□□□ 0.16
RPN10YHR200W FBP26P32604 452 aa16.04■□□□□ 0.16
RPN10YHR200W YHL017WP38745 532 aa16.04■□□□□ 0.16
RPN10YHR200W PEX14P53112 341 aa16.04■□□□□ 0.16
RPN10YHR200W UBP10P53874 792 aaPredicted RBP16.04■□□□□ 0.16
RPN10YHR200W MATALPHA2P0CY08 210 aa16.03■□□□□ 0.16
RPN10YHR200W HMLALPHA2P0CY09 210 aa16.03■□□□□ 0.16
RPN10YHR200W VID28P40547 921 aa16.03■□□□□ 0.16
RPN10YHR200W TIM50Q02776 476 aa16.03■□□□□ 0.16
RPN10YHR200W TSR3Q12094 313 aaKnown RBP16.03■□□□□ 0.16
RPN10YHR200W MPH3P0CE00 602 aa16.02■□□□□ 0.16
RPN10YHR200W ALG2P43636 503 aa16.02■□□□□ 0.16
RPN10YHR200W NPA3P47122 385 aa16.02■□□□□ 0.16
RPN10YHR200W TRM44Q02648 567 aaKnown RBP16.02■□□□□ 0.16
RPN10YHR200W RAD61Q99359 647 aa16.02■□□□□ 0.16
RPN10YHR200W FLO1P32768 1537 aa16.02■□□□□ 0.15
RPN10YHR200W GLC3P32775 704 aa16.01■□□□□ 0.15
RPN10YHR200W SLI15P38283 698 aa16.01■□□□□ 0.15
RPN10YHR200W COG8Q04632 607 aa16.01■□□□□ 0.15
RPN10YHR200W PCL8Q08966 492 aa16.01■□□□□ 0.15
RPN10YHR200W KEL3Q08979 651 aaPredicted RBP16.01■□□□□ 0.15
RPN10YHR200W FLO11P08640 1367 aa16■□□□□ 0.15
RPN10YHR200W ANP1P32629 500 aa15.99■□□□□ 0.15
RPN10YHR200W PES4P39684 611 aa15.99■□□□□ 0.15
RPN10YHR200W CHO2P05374 869 aaKnown RBP15.98■□□□□ 0.15
RPN10YHR200W BUD6P41697 788 aa15.98■□□□□ 0.15
RPN10YHR200W CTF18P49956 741 aa15.98■□□□□ 0.15
RPN10YHR200W HST1P53685 503 aa15.98■□□□□ 0.15
RPN10YHR200W ELG1Q12050 791 aa15.98■□□□□ 0.15
RPN10YHR200W PFK2P16862 959 aaKnown RBP RIP-Chip data15.97■□□□□ 0.15not detected
RPN10YHR200W MYO3P36006 1272 aa15.97■□□□□ 0.15
RPN10YHR200W YHL050CP38721 697 aa15.97■□□□□ 0.15
RPN10YHR200W BDH2P39713 417 aa15.97■□□□□ 0.15
RPN10YHR200W VID27P40157 782 aa15.97■□□□□ 0.15
RPN10YHR200W YJL171CP46992 396 aa15.97■□□□□ 0.15
RPN10YHR200W ECM23Q02710 187 aa15.96■□□□□ 0.15
RPN10YHR200W CLF1Q12309 687 aaPredicted RBP15.96■□□□□ 0.15
RPN10YHR200W RTG2P32608 588 aaKnown RBP15.95■□□□□ 0.14
RPN10YHR200W VPS8P39702 1274 aa15.95■□□□□ 0.14
RPN10YHR200W SNU71P53207 620 aaKnown RBP15.95■□□□□ 0.14
RPN10YHR200W RIT1P23796 513 aa15.94■□□□□ 0.14
RPN10YHR200W PRX1P34227 261 aaKnown RBP15.94■□□□□ 0.14
RPN10YHR200W MAL31P38156 614 aa15.94■□□□□ 0.14
RPN10YHR200W DJP1P40564 432 aa15.94■□□□□ 0.14
RPN10YHR200W FET4P40988 552 aa15.94■□□□□ 0.14
RPN10YHR200W YGR117CP53270 476 aa15.94■□□□□ 0.14
RPN10YHR200W NSG2P53898 299 aa15.94■□□□□ 0.14
RPN10YHR200W HRQ1Q05549 1077 aa15.94■□□□□ 0.14
RPN10YHR200W TFC6Q06339 672 aa15.94■□□□□ 0.14
RPN10YHR200W AIM7Q12156 149 aa15.94■□□□□ 0.14
RPN10YHR200W MSP1P28737 362 aa15.93■□□□□ 0.14
RPN10YHR200W HYR1P40581 163 aaKnown RBP15.93■□□□□ 0.14
RPN10YHR200W VPS4P52917 437 aa15.93■□□□□ 0.14
RPN10YHR200W MAK31P23059 88 aa15.92■□□□□ 0.14
RPN10YHR200W PRE8P23639 250 aa15.92■□□□□ 0.14
RPN10YHR200W BMH2P34730 273 aaKnown RBP15.92■□□□□ 0.14
RPN10YHR200W SNF7P39929 240 aaKnown RBP15.92■□□□□ 0.14
RPN10YHR200W MTC3P53077 123 aa15.92■□□□□ 0.14
RPN10YHR200W YPL150WQ12152 901 aa15.92■□□□□ 0.14
RPN10YHR200W HPR1P17629 752 aaKnown RBP15.91■□□□□ 0.14
RPN10YHR200W SSA4P22202 642 aaKnown RBP15.91■□□□□ 0.14
RPN10YHR200W ADP1P25371 1049 aa15.91■□□□□ 0.14
RPN10YHR200W STV1P37296 890 aa15.91■□□□□ 0.14
RPN10YHR200W UTP7P40055 554 aaKnown RBP15.91■□□□□ 0.14
RPN10YHR200W YLR407WQ06070 228 aa15.91■□□□□ 0.14
RPN10YHR200W ISW2Q08773 1120 aa15.91■□□□□ 0.14
RPN10YHR200W CPA2P03965 1118 aaKnown RBP15.9■□□□□ 0.14
RPN10YHR200W CBP3P21560 335 aa15.9■□□□□ 0.14
RPN10YHR200W SRM1P21827 482 aa15.9■□□□□ 0.14
RPN10YHR200W ROX1P25042 368 aa15.9■□□□□ 0.14
RPN10YHR200W PEX21P50091 288 aa15.9■□□□□ 0.14
RPN10YHR200W YGL081WP53156 320 aa15.9■□□□□ 0.14
RPN10YHR200W RPT6Q01939 405 aaKnown RBP15.9■□□□□ 0.14
RPN10YHR200W HAP5Q02516 242 aa15.9■□□□□ 0.14
RPN10YHR200W THS1P04801 734 aaKnown RBP15.89■□□□□ 0.13
RPN10YHR200W PMA1P05030 918 aaKnown RBP15.89■□□□□ 0.13
RPN10YHR200W KEX1P09620 729 aa15.89■□□□□ 0.13
RPN10YHR200W DIT2P21595 489 aa15.89■□□□□ 0.13
RPN10YHR200W ASF1P32447 279 aa15.89■□□□□ 0.13
RPN10YHR200W CST26P38226 397 aa15.89■□□□□ 0.13
RPN10YHR200W FAR11P53917 953 aa15.89■□□□□ 0.13
RPN10YHR200W YLR278CQ05854 1341 aa15.89■□□□□ 0.13
RPN10YHR200W AKR1P39010 764 aa15.88■□□□□ 0.13
RPN10YHR200W EMP47P43555 445 aa15.88■□□□□ 0.13
RPN10YHR200W EPL1P43572 832 aa15.88■□□□□ 0.13
RPN10YHR200W ENT3P47160 408 aa15.88■□□□□ 0.13
RPN10YHR200W PUS5Q06244 254 aa15.88■□□□□ 0.13
RPN10YHR200W YDL124WQ07551 312 aaKnown RBP15.88■□□□□ 0.13
RPN10YHR200W KIN1P13185 1064 aa15.87■□□□□ 0.13
RPN10YHR200W RNR3P21672 869 aaKnown RBP15.87■□□□□ 0.13
RPN10YHR200W SEC20P28791 383 aa15.87■□□□□ 0.13
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms