RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W ELG1Q12050 791 aa3.3□□□□□ -1.88
CUL3YGR003W MMM1P41800 426 aa3.29□□□□□ -1.88
CUL3YGR003W SPO71Q03868 1245 aa3.29□□□□□ -1.88
CUL3YGR003W ISW1P38144 1129 aa3.29□□□□□ -1.88
CUL3YGR003W BIO5P53744 561 aaKnown RBP3.29□□□□□ -1.88
CUL3YGR003W SOG2Q08817 791 aa3.29□□□□□ -1.88
CUL3YGR003W FLR1P38124 548 aa3.28□□□□□ -1.88
CUL3YGR003W KTR7P40504 517 aa3.28□□□□□ -1.88
CUL3YGR003W CIT3P43635 486 aa3.28□□□□□ -1.88
CUL3YGR003W CWH41P53008 833 aa3.28□□□□□ -1.88
CUL3YGR003W KIP3P53086 805 aaKnown RBP3.28□□□□□ -1.88
CUL3YGR003W MRPL33P20084 86 aa3.28□□□□□ -1.88
CUL3YGR003W LDH1P38139 375 aa3.28□□□□□ -1.88
CUL3YGR003W MSH6Q03834 1242 aa3.28□□□□□ -1.88
CUL3YGR003W ERS1P17261 260 aa3.27□□□□□ -1.89
CUL3YGR003W CAB1Q04430 367 aa3.27□□□□□ -1.89
CUL3YGR003W PRP6P19735 899 aaPredicted RBP3.27□□□□□ -1.89
CUL3YGR003W RTG2P32608 588 aaKnown RBP3.27□□□□□ -1.89
CUL3YGR003W WHI3P34761 661 aaKnown RBP3.27□□□□□ -1.89
CUL3YGR003W TAD3Q9URQ3 322 aa3.27□□□□□ -1.89
CUL3YGR003W VAN1P23642 535 aa3.26□□□□□ -1.89
CUL3YGR003W TFA2P36145 328 aa3.26□□□□□ -1.89
CUL3YGR003W ROM1P53046 1155 aa3.25□□□□□ -1.89
CUL3YGR003W RCM1P53972 490 aa3.25□□□□□ -1.89
CUL3YGR003W YOR059CQ08448 450 aaKnown RBP3.25□□□□□ -1.89
CUL3YGR003W NEO1P40527 1151 aa3.25□□□□□ -1.89
CUL3YGR003W ALD3P54114 506 aa3.25□□□□□ -1.89
CUL3YGR003W GSF2Q04697 403 aaKnown RBP3.25□□□□□ -1.89
CUL3YGR003W FOX2Q02207 900 aaKnown RBP3.24□□□□□ -1.89
CUL3YGR003W TIF1P10081 395 aaKnown RBP3.24□□□□□ -1.89
CUL3YGR003W RPN1P38764 993 aaKnown RBP3.24□□□□□ -1.89
CUL3YGR003W FAR11P53917 953 aa3.24□□□□□ -1.89
CUL3YGR003W FUS1P11710 512 aa3.23□□□□□ -1.89
CUL3YGR003W YBR287WP38355 427 aa3.23□□□□□ -1.89
CUL3YGR003W EMG1Q06287 252 aaKnown RBP3.23□□□□□ -1.89
CUL3YGR003W TRS33Q99394 268 aa3.23□□□□□ -1.89
CUL3YGR003W BOI1P38041 980 aaKnown RBP3.23□□□□□ -1.89
CUL3YGR003W YOR223WQ12015 292 aa3.23□□□□□ -1.89
CUL3YGR003W MSN1P22148 382 aa3.22□□□□□ -1.89
CUL3YGR003W ADP1P25371 1049 aa3.22□□□□□ -1.89
CUL3YGR003W RPL34BP40525 121 aaKnown RBP3.22□□□□□ -1.89
CUL3YGR003W SUV3P32580 737 aa3.21□□□□□ -1.89
CUL3YGR003W GPT2P36148 743 aa3.21□□□□□ -1.89
CUL3YGR003W OYE3P41816 400 aaPredicted RBP3.21□□□□□ -1.89
CUL3YGR003W GAL2P13181 574 aa3.21□□□□□ -1.9
CUL3YGR003W YPT53P36019 220 aa3.21□□□□□ -1.9
CUL3YGR003W AIM3P38266 947 aaKnown RBP3.21□□□□□ -1.9
CUL3YGR003W BIM1P40013 344 aa3.21□□□□□ -1.9
CUL3YGR003W ORC3P54790 616 aa3.21□□□□□ -1.9
CUL3YGR003W NFS1P25374 497 aa3.2□□□□□ -1.9
CUL3YGR003W ATG32P40458 529 aa3.2□□□□□ -1.9
CUL3YGR003W HAS1Q03532 505 aaKnown RBP3.2□□□□□ -1.9
CUL3YGR003W YMR074CQ04773 145 aa3.2□□□□□ -1.9
CUL3YGR003W YBR197CP38306 217 aa3.2□□□□□ -1.9
CUL3YGR003W YJR124CP47159 448 aa3.2□□□□□ -1.9
CUL3YGR003W AIM46P38885 310 aa3.19□□□□□ -1.9
CUL3YGR003W FIR1P40020 876 aa3.19□□□□□ -1.9
CUL3YGR003W ABZ1P37254 787 aaPredicted RBP3.19□□□□□ -1.9
CUL3YGR003W RIM8P53179 542 aa3.18□□□□□ -1.9
CUL3YGR003W SSY1Q03770 852 aa3.17□□□□□ -1.9
CUL3YGR003W MRPL22P53881 309 aa3.17□□□□□ -1.9
CUL3YGR003W SIS2P36024 562 aa3.16□□□□□ -1.9
CUL3YGR003W DOT1Q04089 582 aaKnown RBP3.16□□□□□ -1.9
CUL3YGR003W TRE1Q08919 783 aa3.16□□□□□ -1.9
CUL3YGR003W PNS1Q12412 539 aa3.16□□□□□ -1.9
CUL3YGR003W ISC10P32645 267 aa3.16□□□□□ -1.9
CUL3YGR003W FET4P40988 552 aa3.16□□□□□ -1.9
CUL3YGR003W YLL054CQ12244 843 aa3.16□□□□□ -1.9
CUL3YGR003W TUB2P02557 457 aaKnown RBP3.15□□□□□ -1.9
CUL3YGR003W HVG1P0CE11 249 aa3.15□□□□□ -1.9
CUL3YGR003W RPS4AP0CX35 261 aaKnown RBP3.15□□□□□ -1.9
CUL3YGR003W RPS4BP0CX36 261 aaKnown RBP3.15□□□□□ -1.9
CUL3YGR003W TOD6P34219 525 aa3.15□□□□□ -1.9
CUL3YGR003W LPX1Q12405 387 aaKnown RBP3.15□□□□□ -1.9
CUL3YGR003W LEO1P38439 464 aa3.15□□□□□ -1.91
CUL3YGR003W GLO4Q12320 285 aa3.14□□□□□ -1.91
CUL3YGR003W SOD2P00447 233 aa3.13□□□□□ -1.91
CUL3YGR003W PRO1P32264 428 aa3.13□□□□□ -1.91
CUL3YGR003W HXT8P40886 569 aa3.13□□□□□ -1.91
CUL3YGR003W PEX7P39108 375 aa3.12□□□□□ -1.91
CUL3YGR003W SHM2P37291 469 aaKnown RBP3.12□□□□□ -1.91
CUL3YGR003W RGD2P43556 714 aa3.12□□□□□ -1.91
CUL3YGR003W ALD4P46367 519 aaKnown RBP3.12□□□□□ -1.91
CUL3YGR003W YDL177CQ12257 170 aa3.12□□□□□ -1.91
CUL3YGR003W ECM23Q02710 187 aa3.11□□□□□ -1.91
CUL3YGR003W CLU1Q03690 1277 aaKnown RBP3.11□□□□□ -1.91
CUL3YGR003W YVC1Q12324 675 aa3.11□□□□□ -1.91
CUL3YGR003W ALT1P52893 592 aa3.11□□□□□ -1.91
CUL3YGR003W YPL277CQ08989 487 aa3.11□□□□□ -1.91
CUL3YGR003W PTC7P38797 343 aa3.1□□□□□ -1.91
CUL3YGR003W MSH4P40965 878 aaPredicted RBP3.1□□□□□ -1.91
CUL3YGR003W GCV1P48015 400 aa3.1□□□□□ -1.91
CUL3YGR003W DMA2P53924 522 aa3.1□□□□□ -1.91
CUL3YGR003W EAR1Q03212 550 aa3.1□□□□□ -1.91
CUL3YGR003W YLR358CO13565 187 aa3.09□□□□□ -1.91
CUL3YGR003W RPS13P05756 151 aaKnown RBP3.09□□□□□ -1.91
CUL3YGR003W ETP1P38748 585 aaKnown RBP3.09□□□□□ -1.91
CUL3YGR003W NTA1P40354 457 aa3.09□□□□□ -1.91
CUL3YGR003W YML122CQ03207 126 aa3.09□□□□□ -1.91
CUL3YGR003W UBX7P38349 436 aa3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms