RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W ATG23Q06671 453 aa2.66□□□□□ -1.98
SPF1YEL031W UBC1P21734 215 aaKnown RBP2.66□□□□□ -1.98
SPF1YEL031W IAH1P41734 238 aa2.66□□□□□ -1.98
SPF1YEL031W LCB5Q06147 687 aaKnown RBP2.66□□□□□ -1.98
SPF1YEL031W KEX2P13134 814 aa2.65□□□□□ -1.98
SPF1YEL031W CLB4P24871 460 aa2.65□□□□□ -1.98
SPF1YEL031W CTK3P46963 296 aaPredicted RBP2.65□□□□□ -1.98
SPF1YEL031W ENP2P48234 707 aaKnown RBP2.65□□□□□ -1.98
SPF1YEL031W SNU71P53207 620 aaKnown RBP2.65□□□□□ -1.98
SPF1YEL031W JJJ1P53863 590 aa2.65□□□□□ -1.98
SPF1YEL031W CTF4Q01454 927 aa2.65□□□□□ -1.98
SPF1YEL031W INP2Q03824 705 aa2.65□□□□□ -1.98
SPF1YEL031W CSI1Q04368 295 aa2.65□□□□□ -1.98
SPF1YEL031W NSE3Q05541 303 aa2.65□□□□□ -1.98
SPF1YEL031W HCR1Q05775 265 aaKnown RBP2.65□□□□□ -1.98
SPF1YEL031W YPL150WQ12152 901 aa2.65□□□□□ -1.98
SPF1YEL031W CDC8P00572 216 aa2.65□□□□□ -1.99
SPF1YEL031W KIN1P13185 1064 aa2.65□□□□□ -1.99
SPF1YEL031W MRM1P25270 412 aa2.65□□□□□ -1.99
SPF1YEL031W RPL5P26321 297 aaKnown RBP2.65□□□□□ -1.99
SPF1YEL031W UGA3P26370 528 aa2.65□□□□□ -1.99
SPF1YEL031W SRB4P32569 687 aa2.65□□□□□ -1.99
SPF1YEL031W MPH1P40562 993 aa2.65□□□□□ -1.99
SPF1YEL031W SGM1P47166 707 aa2.65□□□□□ -1.99
SPF1YEL031W SRT1Q03175 343 aa2.65□□□□□ -1.99
SPF1YEL031W MRD1Q06106 887 aaKnown RBP2.65□□□□□ -1.99
SPF1YEL031W NDL1Q06568 189 aa2.65□□□□□ -1.99
SPF1YEL031W APL5Q08951 932 aaKnown RBP2.65□□□□□ -1.99
SPF1YEL031W PGI1P12709 554 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W BUD14P27637 709 aa2.64□□□□□ -1.99
SPF1YEL031W YME2P32843 850 aa2.64□□□□□ -1.99
SPF1YEL031W AKL1P38080 1108 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W REI1P38344 393 aaPredicted RBP2.64□□□□□ -1.99
SPF1YEL031W TRS85P46944 698 aa2.64□□□□□ -1.99
SPF1YEL031W YMR1P47147 688 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
SPF1YEL031W VPS38Q05919 439 aa2.64□□□□□ -1.99
SPF1YEL031W IMH1Q06704 911 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W NOC3Q07896 663 aaPredicted RBP2.64□□□□□ -1.99
SPF1YEL031W ADE6P38972 1358 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W PRT1P06103 763 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W HSC82P15108 705 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W SEC23P15303 768 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W GAL11P19659 1081 aa2.64□□□□□ -1.99
SPF1YEL031W HCA4P20448 770 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W RPC37P36121 282 aa2.64□□□□□ -1.99
SPF1YEL031W EFM2P38347 419 aa2.64□□□□□ -1.99
SPF1YEL031W OSH3P38713 996 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W SEC26P41810 973 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W YKE2P52553 114 aa2.64□□□□□ -1.99
SPF1YEL031W HUL5P53119 910 aa2.64□□□□□ -1.99
SPF1YEL031W MLC1P53141 149 aa2.64□□□□□ -1.99
SPF1YEL031W NCS2P53923 493 aaPredicted RBP2.64□□□□□ -1.99
SPF1YEL031W RSA3Q05942 220 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W NUR1Q12066 484 aa2.64□□□□□ -1.99
SPF1YEL031W IES3Q12345 250 aa2.64□□□□□ -1.99
SPF1YEL031W TRS33Q99394 268 aa2.64□□□□□ -1.99
SPF1YEL031W NAT1P12945 854 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W TOM71P38825 639 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W YIL001WP40560 513 aa2.64□□□□□ -1.99
SPF1YEL031W SAP185P40856 1058 aa2.64□□□□□ -1.99
SPF1YEL031W MAD1P40957 749 aa2.64□□□□□ -1.99
SPF1YEL031W YGL242CP53066 181 aa2.64□□□□□ -1.99
SPF1YEL031W DSD1P53095 428 aa2.64□□□□□ -1.99
SPF1YEL031W NOP6Q07623 225 aaKnown RBP2.64□□□□□ -1.99
SPF1YEL031W YOR389WQ08912 624 aa2.64□□□□□ -1.99
SPF1YEL031W YIL177CP40434 1758 aa2.64□□□□□ -1.99
SPF1YEL031W YJL225CP40889 1758 aa2.64□□□□□ -1.99
SPF1YEL031W THR4P16120 514 aaKnown RBP2.63□□□□□ -1.99
SPF1YEL031W GSY2P27472 705 aa2.63□□□□□ -1.99
SPF1YEL031W DPH5P32469 300 aaPredicted RBP2.63□□□□□ -1.99
SPF1YEL031W OLA1P38219 394 aaKnown RBP2.63□□□□□ -1.99
SPF1YEL031W AIM9P40053 627 aaKnown RBP2.63□□□□□ -1.99
SPF1YEL031W EPS1P40557 701 aa2.63□□□□□ -1.99
SPF1YEL031W HUL4P40985 892 aa2.63□□□□□ -1.99
SPF1YEL031W OSW7P43611 510 aa2.63□□□□□ -1.99
SPF1YEL031W LSG1P53145 640 aaKnown RBP2.63□□□□□ -1.99
SPF1YEL031W HXT17P53631 564 aa2.63□□□□□ -1.99
SPF1YEL031W GYL1Q04322 720 aa2.63□□□□□ -1.99
SPF1YEL031W SPC24Q04477 213 aa2.63□□□□□ -1.99
SPF1YEL031W GFD1Q04839 188 aaKnown RBP2.63□□□□□ -1.99
SPF1YEL031W JIP3O13555 125 aa2.63□□□□□ -1.99
SPF1YEL031W PBS2P08018 668 aa2.63□□□□□ -1.99
SPF1YEL031W FRS2P15625 503 aaKnown RBP2.63□□□□□ -1.99
SPF1YEL031W LOS1P33418 1100 aaPredicted RBP2.63□□□□□ -1.99
SPF1YEL031W RRP14P36080 434 aaKnown RBP2.63□□□□□ -1.99
SPF1YEL031W MCX1P38323 520 aaPredicted RBP2.63□□□□□ -1.99
SPF1YEL031W RGD1P38339 666 aa2.63□□□□□ -1.99
SPF1YEL031W BUD6P41697 788 aa2.63□□□□□ -1.99
SPF1YEL031W FYV8P46949 817 aaKnown RBP2.63□□□□□ -1.99
SPF1YEL031W YNR021WP53723 404 aaKnown RBP2.63□□□□□ -1.99
SPF1YEL031W UBX2Q04228 584 aa2.63□□□□□ -1.99
SPF1YEL031W TAF10Q12030 206 aa2.63□□□□□ -1.99
SPF1YEL031W MCM16Q12262 181 aa2.63□□□□□ -1.99
SPF1YEL031W SAC3P46674 1301 aa2.63□□□□□ -1.99
SPF1YEL031W CPA2P03965 1118 aaKnown RBP2.63□□□□□ -1.99
SPF1YEL031W GCD2P12754 651 aaPredicted RBP2.63□□□□□ -1.99
SPF1YEL031W PMR1P13586 950 aa2.63□□□□□ -1.99
SPF1YEL031W RPC82P32349 654 aa2.63□□□□□ -1.99
SPF1YEL031W UBC6P33296 250 aaPredicted RBP2.63□□□□□ -1.99
SPF1YEL031W HEL1P36113 551 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms