RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	EMG1	Q06287	252 aa	Known RBP	7.65	□□□□□ -1.18
RPN5	YDL147W	TY1A-DR3	Q12441	440 aa		7.65	□□□□□ -1.18
RPN5	YDL147W	NMD2	P38798	1089 aa	Known RBP	7.64	□□□□□ -1.19
RPN5	YDL147W	RVS167	P39743	482 aa	Known RBP	7.64	□□□□□ -1.19
RPN5	YDL147W	OSW7	P43611	510 aa		7.64	□□□□□ -1.19
RPN5	YDL147W	YJR098C	P47139	656 aa		7.64	□□□□□ -1.19
RPN5	YDL147W	RGP1	P16664	663 aa		7.63	□□□□□ -1.19
RPN5	YDL147W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.63	□□□□□ -1.19	RIP-Chip
RPN5	YDL147W	APM2	P38700	605 aa		7.63	□□□□□ -1.19
RPN5	YDL147W	YIL165C	P40446	119 aa		7.63	□□□□□ -1.19
RPN5	YDL147W	SKP1	P52286	194 aa		7.63	□□□□□ -1.19
RPN5	YDL147W	MON1	P53129	644 aa		7.63	□□□□□ -1.19
RPN5	YDL147W	ADI1	Q03677	179 aa		7.63	□□□□□ -1.19
RPN5	YDL147W	RPP1A	P05318	106 aa	Predicted RBP	7.62	□□□□□ -1.19
RPN5	YDL147W	YKL091C	P33324	310 aa	Known RBP	7.62	□□□□□ -1.19
RPN5	YDL147W	NUT1	P53114	1132 aa		7.62	□□□□□ -1.19
RPN5	YDL147W	YPL109C	Q02981	657 aa		7.62	□□□□□ -1.19
RPN5	YDL147W	SSF2	Q12153	453 aa	Predicted RBP	7.62	□□□□□ -1.19
RPN5	YDL147W	MCM5	P29496	775 aa	Known RBP	7.61	□□□□□ -1.19
RPN5	YDL147W	UBP15	P50101	1230 aa		7.61	□□□□□ -1.19
RPN5	YDL147W	YAF9	P53930	226 aa		7.61	□□□□□ -1.19
RPN5	YDL147W	CTR9	P89105	1077 aa		7.61	□□□□□ -1.19
RPN5	YDL147W	ULP1	Q02724	621 aa		7.61	□□□□□ -1.19
RPN5	YDL147W	GDE1	Q02979	1223 aa		7.61	□□□□□ -1.19
RPN5	YDL147W	PYC2	P32327	1180 aa	Known RBP	7.6	□□□□□ -1.19
RPN5	YDL147W	UBP2	Q01476	1272 aa		7.6	□□□□□ -1.19
RPN5	YDL147W	PMT7	Q06644	662 aa		7.6	□□□□□ -1.19
RPN5	YDL147W	TCB1	Q12466	1186 aa		7.6	□□□□□ -1.19
RPN5	YDL147W	YOR131C	Q12486	218 aa		7.6	□□□□□ -1.19
RPN5	YDL147W	CDC34	P14682	295 aa		7.59	□□□□□ -1.19
RPN5	YDL147W	STI1	P15705	589 aa	Known RBP RIP-Chip data	7.59	□□□□□ -1.19	not detected
RPN5	YDL147W	SQT1	P35184	431 aa		7.59	□□□□□ -1.19
RPN5	YDL147W	NCL1	P38205	684 aa	Known RBP	7.59	□□□□□ -1.19
RPN5	YDL147W	ITC1	P53125	1264 aa		7.59	□□□□□ -1.19
RPN5	YDL147W	RNH70	P53331	553 aa		7.59	□□□□□ -1.19
RPN5	YDL147W	DOS2	P54858	310 aa		7.59	□□□□□ -1.19
RPN5	YDL147W	MSH6	Q03834	1242 aa		7.59	□□□□□ -1.19
RPN5	YDL147W	UGA4	P32837	571 aa		7.58	□□□□□ -1.2
RPN5	YDL147W	PPG1	P32838	368 aa		7.58	□□□□□ -1.2
RPN5	YDL147W	NSE3	Q05541	303 aa		7.58	□□□□□ -1.2
RPN5	YDL147W	YLR346C	Q06139	101 aa		7.58	□□□□□ -1.2
RPN5	YDL147W	RSM26	P47141	266 aa		7.57	□□□□□ -1.2
RPN5	YDL147W	RSC2	Q06488	889 aa		7.57	□□□□□ -1.2
RPN5	YDL147W	CDC53	Q12018	815 aa	Known RBP	7.57	□□□□□ -1.2
RPN5	YDL147W	RAD27	P26793	382 aa		7.56	□□□□□ -1.2
RPN5	YDL147W	MRPL16	P38064	232 aa		7.56	□□□□□ -1.2
RPN5	YDL147W	RTT10	Q08924	1013 aa		7.56	□□□□□ -1.2
RPN5	YDL147W	COB	P00163	385 aa		7.55	□□□□□ -1.2
RPN5	YDL147W	GRX1	P25373	110 aa	Known RBP	7.55	□□□□□ -1.2
RPN5	YDL147W	SPC42	P36094	363 aa		7.55	□□□□□ -1.2
RPN5	YDL147W	IOC3	P43596	787 aa		7.55	□□□□□ -1.2
RPN5	YDL147W	FAA4	P47912	694 aa	Known RBP	7.55	□□□□□ -1.2
RPN5	YDL147W	YNR040W	P53736	256 aa		7.55	□□□□□ -1.2
RPN5	YDL147W	YDR444W	Q04093	687 aa		7.55	□□□□□ -1.2
RPN5	YDL147W	TMA46	Q12000	345 aa	Known RBP	7.55	□□□□□ -1.2
RPN5	YDL147W	PIC2	P40035	300 aa		7.54	□□□□□ -1.2
RPN5	YDL147W	GCR1	P07261	785 aa		7.53	□□□□□ -1.2
RPN5	YDL147W	SHU2	P38957	223 aa		7.53	□□□□□ -1.2
RPN5	YDL147W	KRI1	P42846	591 aa	Known RBP	7.53	□□□□□ -1.2
RPN5	YDL147W	YGR053C	P53234	283 aa		7.53	□□□□□ -1.2
RPN5	YDL147W	TDA5	Q06417	326 aa	Known RBP	7.53	□□□□□ -1.2
RPN5	YDL147W	MRL1	Q06815	381 aa		7.53	□□□□□ -1.2
RPN5	YDL147W	OPI10	Q08202	246 aa		7.53	□□□□□ -1.2
RPN5	YDL147W	PRI2	P20457	528 aa		7.52	□□□□□ -1.2
RPN5	YDL147W	DUR3	P33413	735 aa		7.52	□□□□□ -1.2
RPN5	YDL147W	SAP155	P43612	1002 aa		7.52	□□□□□ -1.2
RPN5	YDL147W	RPN4	Q03465	531 aa		7.52	□□□□□ -1.2
RPN5	YDL147W	CDC19	P00549	500 aa	Known RBP	7.52	□□□□□ -1.21
RPN5	YDL147W	YER156C	P40093	338 aa	Known RBP	7.52	□□□□□ -1.21
RPN5	YDL147W	PPT1	P53043	513 aa		7.52	□□□□□ -1.21
RPN5	YDL147W	PEX13	P80667	386 aa		7.52	□□□□□ -1.21
RPN5	YDL147W	HEH2	Q03281	663 aa		7.52	□□□□□ -1.21
RPN5	YDL147W	IOC4	Q04213	475 aa		7.52	□□□□□ -1.21
RPN5	YDL147W	FAL1	Q12099	399 aa	Known RBP	7.52	□□□□□ -1.21
RPN5	YDL147W	RRP14	P36080	434 aa	Known RBP	7.51	□□□□□ -1.21
RPN5	YDL147W	OSH7	P38755	437 aa		7.51	□□□□□ -1.21
RPN5	YDL147W	PEX28	P38848	579 aa		7.51	□□□□□ -1.21
RPN5	YDL147W	XKS1	P42826	600 aa		7.51	□□□□□ -1.21
RPN5	YDL147W	NAN1	Q02931	896 aa	Known RBP	7.51	□□□□□ -1.21
RPN5	YDL147W	YDL176W	Q12027	708 aa		7.51	□□□□□ -1.21
RPN5	YDL147W	CIT2	P08679	460 aa		7.5	□□□□□ -1.21
RPN5	YDL147W	TAF13	P11747	167 aa		7.5	□□□□□ -1.21
RPN5	YDL147W	NPR1	P22211	790 aa		7.5	□□□□□ -1.21
RPN5	YDL147W	RIM11	P38615	370 aa		7.5	□□□□□ -1.21
RPN5	YDL147W	LCB5	Q06147	687 aa	Known RBP	7.5	□□□□□ -1.21
RPN5	YDL147W	BDF2	Q07442	638 aa		7.5	□□□□□ -1.21
RPN5	YDL147W	FUS1	P11710	512 aa		7.49	□□□□□ -1.21
RPN5	YDL147W	DUT1	P33317	147 aa		7.49	□□□□□ -1.21
RPN5	YDL147W	CMR1	Q12510	522 aa	Known RBP	7.49	□□□□□ -1.21
RPN5	YDL147W	RAD4	P14736	754 aa		7.48	□□□□□ -1.21
RPN5	YDL147W	YKL077W	P36081	392 aa		7.48	□□□□□ -1.21
RPN5	YDL147W	SPF1	P39986	1215 aa	Known RBP	7.48	□□□□□ -1.21
RPN5	YDL147W	YJL181W	P46987	611 aa		7.48	□□□□□ -1.21
RPN5	YDL147W	HUL5	P53119	910 aa		7.48	□□□□□ -1.21
RPN5	YDL147W	NOG1	Q02892	647 aa	Known RBP	7.48	□□□□□ -1.21
RPN5	YDL147W	OPT2	Q06593	877 aa		7.48	□□□□□ -1.21
RPN5	YDL147W	IDI1	P15496	288 aa		7.47	□□□□□ -1.21
RPN5	YDL147W	PRP5	P21372	849 aa	Predicted RBP	7.47	□□□□□ -1.21
RPN5	YDL147W	BAS1	P22035	811 aa		7.47	□□□□□ -1.21
RPN5	YDL147W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	7.47	□□□□□ -1.21	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms