RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	SSK22	P25390	1331 aa	Predicted RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
RPO21	YDL140C	SSP1	P38871	571 aa		4.25	□□□□□ -1.73
RPO21	YDL140C	FYV8	P46949	817 aa	Known RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	ESC8	Q08119	714 aa		4.25	□□□□□ -1.73
RPO21	YDL140C	GRE2	Q12068	342 aa	Known RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	HPR1	P17629	752 aa	Known RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	MSR1	P38714	643 aa		4.25	□□□□□ -1.73
RPO21	YDL140C	NCS6	P53088	359 aa		4.25	□□□□□ -1.73
RPO21	YDL140C	TFB3	Q03290	321 aa		4.25	□□□□□ -1.73
RPO21	YDL140C	YML083C	Q04526	418 aa		4.25	□□□□□ -1.73
RPO21	YDL140C	CST9	Q06032	482 aa		4.25	□□□□□ -1.73
RPO21	YDL140C	TRP5	P00931	707 aa	Known RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	PRP9	P19736	530 aa	Known RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	SPC110	P32380	944 aa		4.25	□□□□□ -1.73
RPO21	YDL140C	BOI1	P38041	980 aa	Known RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	SMC2	P38989	1170 aa	Known RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	SAH1	P39954	449 aa	Known RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	HMF1	P40037	129 aa	Known RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	SYF1	Q04048	859 aa	Predicted RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	SPO20	Q04359	397 aa		4.25	□□□□□ -1.73
RPO21	YDL140C	HCR1	Q05775	265 aa	Known RBP	4.25	□□□□□ -1.73
RPO21	YDL140C	STN1	P38960	494 aa		4.24	□□□□□ -1.73
RPO21	YDL140C	MMR1	Q06324	491 aa		4.24	□□□□□ -1.73
RPO21	YDL140C	SNT2	P53127	1403 aa		4.24	□□□□□ -1.73
RPO21	YDL140C	CST6	P40535	587 aa		4.24	□□□□□ -1.73
RPO21	YDL140C	OSW7	P43611	510 aa		4.24	□□□□□ -1.73
RPO21	YDL140C	SOL4	P53315	255 aa		4.24	□□□□□ -1.73
RPO21	YDL140C	CPR6	P53691	371 aa	Known RBP	4.24	□□□□□ -1.73
RPO21	YDL140C	YDL144C	Q07589	356 aa		4.24	□□□□□ -1.73
RPO21	YDL140C	RUD3	Q12234	484 aa	Known RBP	4.24	□□□□□ -1.73
RPO21	YDL140C	CDC60	P26637	1090 aa	Known RBP	4.24	□□□□□ -1.73
RPO21	YDL140C	SQT1	P35184	431 aa		4.24	□□□□□ -1.73
RPO21	YDL140C	HEF3	P53978	1044 aa	Known RBP	4.24	□□□□□ -1.73
RPO21	YDL140C	CLU1	Q03690	1277 aa	Known RBP	4.24	□□□□□ -1.73
RPO21	YDL140C	IKI3	Q06706	1349 aa	Known RBP	4.24	□□□□□ -1.73
RPO21	YDL140C	RED1	P14291	827 aa		4.24	□□□□□ -1.73
RPO21	YDL140C	TYS1	P36421	394 aa	Known RBP	4.24	□□□□□ -1.73
RPO21	YDL140C	DUS1	P53759	423 aa	Known RBP	4.24	□□□□□ -1.73
RPO21	YDL140C	TLG2	Q08144	397 aa		4.24	□□□□□ -1.73
RPO21	YDL140C	CIT1	P00890	479 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	MRF1	P30775	413 aa	Predicted RBP	4.23	□□□□□ -1.73
RPO21	YDL140C	TCA17	P32613	152 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	MSH4	P40965	878 aa	Predicted RBP	4.23	□□□□□ -1.73
RPO21	YDL140C	TPO2	P53283	614 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	PRP42	Q03776	544 aa	Known RBP	4.23	□□□□□ -1.73
RPO21	YDL140C	PHM7	Q12252	991 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	SIR4	P11978	1358 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	MCM2	P29469	868 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	TIM23	P32897	222 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	MAC1	P35192	417 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	GGA2	P38817	585 aa	Known RBP	4.23	□□□□□ -1.73
RPO21	YDL140C	SEY1	Q99287	776 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	SPO74	P45819	413 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	JIP5	Q06214	492 aa	Predicted RBP	4.23	□□□□□ -1.73
RPO21	YDL140C	YDL073W	Q07454	984 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	PMI40	P29952	429 aa	Known RBP	4.23	□□□□□ -1.73
RPO21	YDL140C	UBP15	P50101	1230 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	RNT1	Q02555	471 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	ALE1	Q08548	619 aa		4.23	□□□□□ -1.73
RPO21	YDL140C	BMS1	Q08965	1183 aa	Known RBP	4.23	□□□□□ -1.73
RPO21	YDL140C	RRP6	Q12149	733 aa	Known RBP	4.23	□□□□□ -1.73
RPO21	YDL140C	RFC1	P38630	861 aa	Known RBP	4.22	□□□□□ -1.73
RPO21	YDL140C	YKE2	P52553	114 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	RSF2	P46974	1380 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	HSP82	P02829	709 aa	Known RBP	4.22	□□□□□ -1.73
RPO21	YDL140C	GUT1	P32190	709 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	VPS27	P40343	622 aa	Known RBP	4.22	□□□□□ -1.73
RPO21	YDL140C	ICL2	Q12031	575 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	RPO31	P04051	1460 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	HIR3	P47171	1648 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	YJR079W	P47126	109 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	RSM7	P47150	247 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	PLP2	Q12017	286 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	NCR1	Q12200	1170 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	ZRT2	Q12436	422 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	TY3B-G	Q99315	1547 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	MLS1	P30952	554 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	YMR124W	P39523	943 aa	Known RBP	4.22	□□□□□ -1.73
RPO21	YDL140C	ERO1	Q03103	563 aa		4.22	□□□□□ -1.73
RPO21	YDL140C	GID8	P40208	455 aa		4.21	□□□□□ -1.73
RPO21	YDL140C	EMP47	P43555	445 aa		4.21	□□□□□ -1.73
RPO21	YDL140C	PRO2	P54885	456 aa	Known RBP	4.21	□□□□□ -1.73
RPO21	YDL140C	TAP42	Q04372	366 aa		4.21	□□□□□ -1.73
RPO21	YDL140C	FAR10	Q06001	478 aa		4.21	□□□□□ -1.73
RPO21	YDL140C	ATG20	Q07528	640 aa		4.21	□□□□□ -1.73
RPO21	YDL140C	ADE6	P38972	1358 aa	Known RBP	4.21	□□□□□ -1.73
RPO21	YDL140C	MTF2	P10849	440 aa		4.21	□□□□□ -1.74
RPO21	YDL140C	RSR1	P13856	272 aa		4.21	□□□□□ -1.74
RPO21	YDL140C	MCM5	P29496	775 aa	Known RBP	4.21	□□□□□ -1.74
RPO21	YDL140C	MCM4	P30665	933 aa	Known RBP	4.21	□□□□□ -1.74
RPO21	YDL140C	YLR225C	Q05948	407 aa	Known RBP	4.21	□□□□□ -1.74
RPO21	YDL140C	CSC1	Q06538	782 aa		4.21	□□□□□ -1.74
RPO21	YDL140C	TGL5	Q12043	749 aa		4.21	□□□□□ -1.74
RPO21	YDL140C	MAS1	P10507	462 aa		4.21	□□□□□ -1.74
RPO21	YDL140C	GIP1	P38229	639 aa		4.21	□□□□□ -1.74
RPO21	YDL140C	IRC8	P47046	822 aa		4.21	□□□□□ -1.74
RPO21	YDL140C	YGL242C	P53066	181 aa		4.21	□□□□□ -1.74
RPO21	YDL140C	DSD1	P53095	428 aa		4.21	□□□□□ -1.74
RPO21	YDL140C	KEL3	Q08979	651 aa	Predicted RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms