RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C LSO1Q3E827 93 aa5.47□□□□□ -1.53
RPB5YBR154C SAF1P38352 637 aa5.46□□□□□ -1.54
RPB5YBR154C PAN5P38787 379 aa5.46□□□□□ -1.54
RPB5YBR154C INP52P50942 1183 aa5.46□□□□□ -1.54
RPB5YBR154C SUB2Q07478 446 aaKnown RBP5.46□□□□□ -1.54
RPB5YBR154C MED7Q08278 222 aa5.46□□□□□ -1.54
RPB5YBR154C CHS2P14180 963 aa5.45□□□□□ -1.54
RPB5YBR154C IRS4P36115 615 aaKnown RBP5.45□□□□□ -1.54
RPB5YBR154C MAE1P36013 669 aaKnown RBP5.44□□□□□ -1.54
RPB5YBR154C BOI1P38041 980 aaKnown RBP5.44□□□□□ -1.54
RPB5YBR154C ALD3P54114 506 aa5.44□□□□□ -1.54
RPB5YBR154C SPO71Q03868 1245 aa5.44□□□□□ -1.54
RPB5YBR154C RPB10P22139 70 aa5.43□□□□□ -1.54
RPB5YBR154C PSY2P40164 858 aa5.43□□□□□ -1.54
RPB5YBR154C RPL34AP87262 121 aaPredicted RBP5.43□□□□□ -1.54
RPB5YBR154C YLR122CQ12312 125 aa5.43□□□□□ -1.54
RPB5YBR154C TIF6Q12522 245 aaKnown RBP5.43□□□□□ -1.54
RPB5YBR154C KTR2P33550 425 aa5.42□□□□□ -1.54
RPB5YBR154C TFA2P36145 328 aa5.42□□□□□ -1.54
RPB5YBR154C AKR1P39010 764 aa5.42□□□□□ -1.54
RPB5YBR154C POL5P39985 1022 aaKnown RBP5.42□□□□□ -1.54
RPB5YBR154C BOL3P39724 118 aa5.41□□□□□ -1.54
RPB5YBR154C NEO1P40527 1151 aa5.41□□□□□ -1.54
RPB5YBR154C REC8Q12188 680 aa5.41□□□□□ -1.54
RPB5YBR154C YJR124CP47159 448 aa5.4□□□□□ -1.54
RPB5YBR154C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
RPB5YBR154C ELG1Q12050 791 aa5.4□□□□□ -1.54
RPB5YBR154C TRP3P00937 484 aa5.39□□□□□ -1.55
RPB5YBR154C LIP5P32875 414 aa5.39□□□□□ -1.55
RPB5YBR154C YKR073CP36153 106 aa5.39□□□□□ -1.55
RPB5YBR154C TOS1P38288 455 aa5.39□□□□□ -1.55
RPB5YBR154C YGR130CP53278 816 aa5.39□□□□□ -1.55
RPB5YBR154C YNR065CP53751 1116 aa5.39□□□□□ -1.55
RPB5YBR154C FAR11P53917 953 aa5.39□□□□□ -1.55
RPB5YBR154C NAM7P30771 971 aaKnown RBP5.38□□□□□ -1.55
RPB5YBR154C PYC2P32327 1180 aaKnown RBP5.38□□□□□ -1.55
RPB5YBR154C FET4P40988 552 aa5.38□□□□□ -1.55
RPB5YBR154C UFD2P54860 961 aa5.38□□□□□ -1.55
RPB5YBR154C KAR5Q04746 504 aa5.38□□□□□ -1.55
RPB5YBR154C HVG1P0CE11 249 aa5.37□□□□□ -1.55
RPB5YBR154C GLO3P38682 493 aaKnown RBP5.37□□□□□ -1.55
RPB5YBR154C SPO74P45819 413 aa5.37□□□□□ -1.55
RPB5YBR154C GLO4Q12320 285 aa5.37□□□□□ -1.55
RPB5YBR154C MSB1P21339 1137 aaKnown RBP5.36□□□□□ -1.55
RPB5YBR154C PUB1P32588 453 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
RPB5YBR154C ECM2P38241 364 aaKnown RBP5.36□□□□□ -1.55
RPB5YBR154C NCE103P53615 221 aa5.36□□□□□ -1.55
RPB5YBR154C HAS1Q03532 505 aaKnown RBP5.36□□□□□ -1.55
RPB5YBR154C CYC7P00045 113 aa5.35□□□□□ -1.55
RPB5YBR154C ERS1P17261 260 aa5.35□□□□□ -1.55
RPB5YBR154C IRC24P40580 263 aa5.35□□□□□ -1.55
RPB5YBR154C YLL054CQ12244 843 aa5.35□□□□□ -1.55
RPB5YBR154C QDR1P40475 563 aa5.34□□□□□ -1.55
RPB5YBR154C KIP3P53086 805 aaKnown RBP5.34□□□□□ -1.55
RPB5YBR154C GIC2Q06648 383 aa5.34□□□□□ -1.55
RPB5YBR154C BRE4Q07660 1125 aa5.34□□□□□ -1.55
RPB5YBR154C ATG1P53104 897 aa5.33□□□□□ -1.56
RPB5YBR154C YMR074CQ04773 145 aa5.33□□□□□ -1.56
RPB5YBR154C YOR223WQ12015 292 aa5.33□□□□□ -1.56
RPB5YBR154C SSA1P10591 642 aaKnown RBP5.32□□□□□ -1.56
RPB5YBR154C ACF4P47129 309 aa5.32□□□□□ -1.56
RPB5YBR154C RSC4Q02206 625 aa5.32□□□□□ -1.56
RPB5YBR154C AVT1P47082 602 aa5.31□□□□□ -1.56
RPB5YBR154C MAG2Q06436 670 aaKnown RBP5.31□□□□□ -1.56
RPB5YBR154C NSI1Q12457 570 aa5.31□□□□□ -1.56
RPB5YBR154C CTH1P47976 325 aa5.3□□□□□ -1.56
RPB5YBR154C GCV1P48015 400 aa5.3□□□□□ -1.56
RPB5YBR154C CTR9P89105 1077 aa5.3□□□□□ -1.56
RPB5YBR154C MMM1P41800 426 aa5.29□□□□□ -1.56
RPB5YBR154C YNL011CP53980 444 aa5.29□□□□□ -1.56
RPB5YBR154C TRS120Q04183 1289 aa5.29□□□□□ -1.56
RPB5YBR154C BSC2Q05611 235 aa5.29□□□□□ -1.56
RPB5YBR154C YIG1Q08956 461 aa5.29□□□□□ -1.56
RPB5YBR154C NPR1P22211 790 aa5.28□□□□□ -1.56
RPB5YBR154C YOR059CQ08448 450 aaKnown RBP5.28□□□□□ -1.56
RPB5YBR154C HTS1P07263 546 aaKnown RBP5.27□□□□□ -1.57
RPB5YBR154C YHL008CP38750 627 aa5.27□□□□□ -1.57
RPB5YBR154C CIT3P43635 486 aa5.27□□□□□ -1.57
RPB5YBR154C CDC55Q00362 526 aa5.27□□□□□ -1.57
RPB5YBR154C MSH6Q03834 1242 aa5.27□□□□□ -1.57
RPB5YBR154C CMR1Q12510 522 aaKnown RBP5.27□□□□□ -1.57
RPB5YBR154C CDC3P32457 520 aaKnown RBP5.26□□□□□ -1.57
RPB5YBR154C GPT2P36148 743 aa5.26□□□□□ -1.57
RPB5YBR154C RIM11P38615 370 aa5.26□□□□□ -1.57
RPB5YBR154C DOT1Q04089 582 aaKnown RBP5.26□□□□□ -1.57
RPB5YBR154C AOS1Q06624 347 aa5.26□□□□□ -1.57
RPB5YBR154C COBP00163 385 aa5.25□□□□□ -1.57
RPB5YBR154C PRP5P21372 849 aaPredicted RBP5.25□□□□□ -1.57
RPB5YBR154C PMT7Q06644 662 aa5.25□□□□□ -1.57
RPB5YBR154C ELM1P32801 640 aa5.24□□□□□ -1.57
RPB5YBR154C UTP22P53254 1237 aaPredicted RBP5.24□□□□□ -1.57
RPB5YBR154C MEC3Q02574 474 aa5.24□□□□□ -1.57
RPB5YBR154C FLP1P03870 423 aa5.23□□□□□ -1.57
RPB5YBR154C WHI3P34761 661 aaKnown RBP5.23□□□□□ -1.57
RPB5YBR154C SDH1Q00711 640 aa5.23□□□□□ -1.57
RPB5YBR154C TRL1P09880 827 aaKnown RBP5.22□□□□□ -1.57
RPB5YBR154C GRS1P38088 690 aaKnown RBP5.22□□□□□ -1.57
RPB5YBR154C REI1P38344 393 aaPredicted RBP5.22□□□□□ -1.57
RPB5YBR154C SAP155P43612 1002 aa5.22□□□□□ -1.57
RPB5YBR154C RCM1P53972 490 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms